BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0136.p (341 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXB0.1 D8IXB0_HERSS Phenylpropionate dioxygenase (Rieske 2Fe-2... 639 0.0 E4RDJ1.1 E4RDJ1_PSEPB Rieske 2Fe-2S family protein 520 e-145 Q88HZ0.1 Q88HZ0_PSEPK Rieske 2Fe-2S family protein 519 e-145 D6CNR7.1 D6CNR7_THIS3 Putative ring-hydroxylating dioxygenase wi... 517 e-144 B1J927.1 B1J927_PSEPW Rieske (2Fe-2S) domain protein 517 e-144 >D8IXB0.1 D8IXB0_HERSS Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein EC=1.13.11.16 Length = 343 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 298/338 (88%), Positives = 318/338 (94%) Query: 1 MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60 MLVT+QKVLR+FWYA+MPIA L GP+PFTLLGE +VVWLK G PAALQDRCCHRTA+L Sbjct: 1 MLVTQQKVLRRFWYALMPIAQLRQGPQPFTLLGEKLVVWLKEDGAPAALQDRCCHRTARL 60 Query: 61 SKGFVDNGNIVCGYHGWTFDCAGACVRVPQNADGSVPAGAMVQSYYCEERYGYVWVALEK 120 SKGFV+NGNIVCGYHGWTF+ GACVRVPQNADGSVPAGA V+SY+C+ERYGYVWVALE+ Sbjct: 61 SKGFVENGNIVCGYHGWTFNGEGACVRVPQNADGSVPAGACVKSYFCKERYGYVWVALEE 120 Query: 121 PLRDIPFFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGTFGLYDQPKPE 180 PLRDIP FPEE PGYRRIFQFYERWETSALRMMENSFDNSHFSYVHR TFGLYDQPKPE Sbjct: 121 PLRDIPEFPEEGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRATFGLYDQPKPE 180 Query: 181 KYEINETDYGFEAETLVPIKNVPASYRVTGTTDDTTMRHMFNRWYLPFSRRFGCQYPSSG 240 KYEI ETDYGFEAET VPIKNVPAS+RVTG+T DTT+RHMFNRWYLPF RRFGC YP SG Sbjct: 181 KYEIAETDYGFEAETRVPIKNVPASHRVTGSTADTTVRHMFNRWYLPFVRRFGCTYPESG 240 Query: 241 RHHIIYNCATPIDDGSIMLAQWLYRNDTEEDCAEADLIAWDAPILVEDREILEATDPDAC 300 RHHIIYNCATPIDDGSIML+QWLYRNDTEE+C+EA+LIAWDAPILVEDREILEATDPDAC Sbjct: 241 RHHIIYNCATPIDDGSIMLSQWLYRNDTEEECSEAELIAWDAPILVEDREILEATDPDAC 300 Query: 301 IDVRRKQEFHMASDRPGLIMRRMLLQLLEEHGESEVFR 338 IDVRR+QEFHMASDRPGLIMRRMLLQLLEEHGESEVFR Sbjct: 301 IDVRRRQEFHMASDRPGLIMRRMLLQLLEEHGESEVFR 338 >E4RDJ1.1 E4RDJ1_PSEPB Rieske 2Fe-2S family protein Length = 341 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 232/340 (68%), Positives = 279/340 (82%), Gaps = 1/340 (0%) Query: 1 MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60 MLVTKQ VLR+FWYA++P+ LEDGP+PFTLLGE +V+W + G P A+QDRCCHRTAKL Sbjct: 1 MLVTKQPVLRRFWYALLPMTALEDGPRPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKL 60 Query: 61 SKGFVD-NGNIVCGYHGWTFDCAGACVRVPQNADGSVPAGAMVQSYYCEERYGYVWVALE 119 SKGFV GNI CGYHGW +DC G CV++PQN G++P GA V++Y+C+E+YGY WV+L+ Sbjct: 61 SKGFVSAEGNIACGYHGWEYDCTGTCVKIPQNPTGAIPPGAAVKAYHCQEKYGYAWVSLD 120 Query: 120 KPLRDIPFFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGTFGLYDQPKP 179 PL+ IP FPE+ TPGYRRIFQFYE W+TS LR+MENSFDNSHFS+VH+ FGL+DQP+P Sbjct: 121 DPLQPIPEFPEDGTPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKANFGLFDQPQP 180 Query: 180 EKYEINETDYGFEAETLVPIKNVPASYRVTGTTDDTTMRHMFNRWYLPFSRRFGCQYPSS 239 YE ETDYGFEAET VPI+N AS+R+TGTT+ T RH+ NR+YLPFSRRFGC YP S Sbjct: 181 ASYEFRETDYGFEAETRVPIRNPEASFRITGTTEPITQRHLLNRYYLPFSRRFGCMYPDS 240 Query: 240 GRHHIIYNCATPIDDGSIMLAQWLYRNDTEEDCAEADLIAWDAPILVEDREILEATDPDA 299 G HHIIYNCATPIDD +ML QWLYRND+E+ C+ +LI WDA I EDR+ILEATDPDA Sbjct: 241 GIHHIIYNCATPIDDNRLMLVQWLYRNDSEDQCSTQELIDWDAAITAEDRDILEATDPDA 300 Query: 300 CIDVRRKQEFHMASDRPGLIMRRMLLQLLEEHGESEVFRS 339 C+D RR+ E HM SD+PGL++RR LL LLE +GESEVF S Sbjct: 301 CVDTRRRVELHMPSDKPGLVIRRQLLGLLEANGESEVFLS 340 >Q88HZ0.1 Q88HZ0_PSEPK Rieske 2Fe-2S family protein Length = 341 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 232/340 (68%), Positives = 278/340 (81%), Gaps = 1/340 (0%) Query: 1 MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60 MLVTKQ VLR+FWYA++P+ LEDGPKPFTLLGE +V+W + G P A++DRCCHRTAKL Sbjct: 1 MLVTKQPVLRRFWYALLPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKL 60 Query: 61 SKGFVD-NGNIVCGYHGWTFDCAGACVRVPQNADGSVPAGAMVQSYYCEERYGYVWVALE 119 SKGFV GNI CGYHGW +DC G CV++PQ+ G++P GA V++Y+C+E+YGY WV+L+ Sbjct: 61 SKGFVSAEGNIACGYHGWEYDCTGTCVKIPQSPTGAIPPGAAVKAYHCQEKYGYAWVSLD 120 Query: 120 KPLRDIPFFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGTFGLYDQPKP 179 PL+ IP FPE+ PGYRRIFQFYE W+TS LR+MENSFDNSHFS+VH+ FGL+DQP+P Sbjct: 121 DPLQPIPEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKANFGLFDQPQP 180 Query: 180 EKYEINETDYGFEAETLVPIKNVPASYRVTGTTDDTTMRHMFNRWYLPFSRRFGCQYPSS 239 YE ETDYGFEAET VPI+N AS+R+TGTT+ T RH+ NR+YLPFSRRFGC YP S Sbjct: 181 ASYEFRETDYGFEAETRVPIRNPEASFRITGTTEPITQRHLLNRYYLPFSRRFGCMYPDS 240 Query: 240 GRHHIIYNCATPIDDGSIMLAQWLYRNDTEEDCAEADLIAWDAPILVEDREILEATDPDA 299 G HHIIYNCATPIDD +ML QWLYRND+EE C+ +LI WDA I EDR+ILEATDPDA Sbjct: 241 GIHHIIYNCATPIDDNRLMLVQWLYRNDSEEQCSTQELIDWDAAITAEDRDILEATDPDA 300 Query: 300 CIDVRRKQEFHMASDRPGLIMRRMLLQLLEEHGESEVFRS 339 C+D RR+ E HM SD+PGL++RR LL LLE HGESEVF S Sbjct: 301 CVDTRRRVELHMPSDKPGLVIRRQLLGLLEAHGESEVFLS 340 >D6CNR7.1 D6CNR7_THIS3 Putative ring-hydroxylating dioxygenase with Rieske 2Fe-2S domain Length = 353 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 235/340 (69%), Positives = 278/340 (81%), Gaps = 1/340 (0%) Query: 1 MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60 MLVT+Q VLR+FWYA+MP+ LE GPKPFTLLGE +V+W G+PAAL+DRCCHRTA+L Sbjct: 1 MLVTQQPVLRRFWYAIMPLHDLESGPKPFTLLGEKLVLWKTPDGQPAALRDRCCHRTAQL 60 Query: 61 SKGFVDN-GNIVCGYHGWTFDCAGACVRVPQNADGSVPAGAMVQSYYCEERYGYVWVALE 119 SKGFVD G IVCGYHGWT+DC G CVR+PQN D ++PAGA V+S++C RYGY WVALE Sbjct: 61 SKGFVDAAGCIVCGYHGWTYDCGGNCVRIPQNPDMAIPAGARVESFHCAARYGYAWVALE 120 Query: 120 KPLRDIPFFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGTFGLYDQPKP 179 KPL IP FPEE G+RR+FQFYERW TS LR MEN+FDNSHFSYVH+ FG+++QP+P Sbjct: 121 KPLAPIPDFPEEGAEGFRRVFQFYERWATSPLRFMENAFDNSHFSYVHKANFGIFEQPQP 180 Query: 180 EKYEINETDYGFEAETLVPIKNVPASYRVTGTTDDTTMRHMFNRWYLPFSRRFGCQYPSS 239 Y I T+ GFEAETLVPI+N + +R+TG+T + T RH+ NRW+LPF RRFGC YP S Sbjct: 181 SSYRIEATEDGFEAETLVPIRNPASGHRITGSTGEFTQRHLLNRWWLPFVRRFGCVYPES 240 Query: 240 GRHHIIYNCATPIDDGSIMLAQWLYRNDTEEDCAEADLIAWDAPILVEDREILEATDPDA 299 G HHIIYNCATPIDD IMLAQWLYRNDTE DC+ +LIAWD PI+ EDR+ILEATDPDA Sbjct: 241 GLHHIIYNCATPIDDDHIMLAQWLYRNDTEADCSTQELIAWDRPIVDEDRDILEATDPDA 300 Query: 300 CIDVRRKQEFHMASDRPGLIMRRMLLQLLEEHGESEVFRS 339 C+D RR+ EFHM SD+PGL+MR+ LL+LL HGE EVFRS Sbjct: 301 CVDTRRRMEFHMQSDKPGLMMRKRLLELLHAHGEEEVFRS 340 >B1J927.1 B1J927_PSEPW Rieske (2Fe-2S) domain protein Length = 341 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 233/340 (68%), Positives = 278/340 (81%), Gaps = 1/340 (0%) Query: 1 MLVTKQKVLRKFWYAVMPIAMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKL 60 MLVTKQ VLR+FWYA++P+A L+DGPKPFTLLGE +V+W + G P A++DRCCHRTAKL Sbjct: 1 MLVTKQPVLRRFWYALLPMAALDDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKL 60 Query: 61 SKGFV-DNGNIVCGYHGWTFDCAGACVRVPQNADGSVPAGAMVQSYYCEERYGYVWVALE 119 SKGFV ++GNI CGYHGW +DC+GACV++PQN G++P GA V++Y+C+E+YGY WVAL+ Sbjct: 61 SKGFVSEDGNIACGYHGWEYDCSGACVKIPQNPTGAIPPGAAVKAYHCQEKYGYAWVALD 120 Query: 120 KPLRDIPFFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGTFGLYDQPKP 179 PL+ IP FPE+ PGYRRIFQFYE W+TS LR+MENSFDNSHFS+VH+ FGL+DQP+P Sbjct: 121 DPLQPIPDFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKANFGLFDQPQP 180 Query: 180 EKYEINETDYGFEAETLVPIKNVPASYRVTGTTDDTTMRHMFNRWYLPFSRRFGCQYPSS 239 YE ETDYGFEAET VPI+N S+ +TGT T RH+ NR+YLPFSRRFGC YP S Sbjct: 181 ASYEFRETDYGFEAETRVPIRNPEESFAITGTRAPITERHLVNRYYLPFSRRFGCMYPDS 240 Query: 240 GRHHIIYNCATPIDDGSIMLAQWLYRNDTEEDCAEADLIAWDAPILVEDREILEATDPDA 299 G HHIIYNCATPIDDG +ML QWLYRND+E DC LI WDA I EDR+ILEATDPDA Sbjct: 241 GIHHIIYNCATPIDDGRLMLVQWLYRNDSEADCPTQALIDWDAAITAEDRDILEATDPDA 300 Query: 300 CIDVRRKQEFHMASDRPGLIMRRMLLQLLEEHGESEVFRS 339 C+D RR+ E HM SD+PGL++RR LL LLE HGESEVF S Sbjct: 301 CVDTRRRVELHMPSDKPGLVIRRQLLGLLEAHGESEVFAS 340