BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0134.p (340 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXA8.1 D8IXA8_HERSS ABC-type nitrate/sulfonate/bicarbonate tra... 563 e-158 Q13Y85.1 Q13Y85_BURXL ABC nitrate/sulfonate/bicarbonate family t... 450 e-124 D5NR65.1 D5NR65_9BURK NMT1/THI5 like domain protein 447 e-124 B1FSR1.1 B1FSR1_9BURK NMT1/THI5 like domain protein 417 e-114 Q88HY9.1 Q88HY9_PSEPK ABC transporter, periplasmic binding compo... 398 e-109 >D8IXA8.1 D8IXA8_HERSS ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein Length = 329 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 267/303 (88%), Positives = 286/303 (94%) Query: 38 QAQEKVTVLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFS 97 QAQ+KVT+LSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFS Sbjct: 27 QAQDKVTLLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFS 86 Query: 98 MGYDFTVLKGIEQGLPLVTVGTSFQSDLQGMMTHADVANLGALKDKTILVAGSGQSSWWP 157 MGYDFTV+KG+EQGLPLVTVGTSFQSDLQGMMTH DVA+LG LK+KTILVAGSGQSSWWP Sbjct: 87 MGYDFTVMKGVEQGLPLVTVGTSFQSDLQGMMTHDDVASLGGLKNKTILVAGSGQSSWWP 146 Query: 158 WLKARYGYTDAQSKAYTFNLQPFFADPNTVQQAYPSSELFQAEKSGAKANFFLFAQEGYP 217 WLKA+YGYTDAQS+AYTFNLQPFFADPN QQAYPSSELFQA+K+G K+ FFLFA EGYP Sbjct: 147 WLKAKYGYTDAQSRAYTFNLQPFFADPNIAQQAYPSSELFQADKAGVKSKFFLFASEGYP 206 Query: 218 PYGTTIITLQKMVATKPDLVKRFVKATAEGWKSYLEDPSAGNALIKKDNKEMGDEQLAYA 277 PYGTTI+TLQK VATKPDLV+RFVKATAEGWKSYLEDP+ GNALIK DNK MGDEQLAYA Sbjct: 207 PYGTTIVTLQKTVATKPDLVQRFVKATAEGWKSYLEDPAPGNALIKADNKNMGDEQLAYA 266 Query: 278 VRKLKELKVVTGGDAAKQGIGIMTDERWKKTYETMVATGLLKADVDWHKAYTTQFVKDMH 337 + KLKELKVVTGGDAA+ GIG+MTDERWK+TYE MVATGLLKA D+HKAYTTQFVKDM Sbjct: 267 LGKLKELKVVTGGDAARLGIGVMTDERWKQTYEVMVATGLLKAGTDYHKAYTTQFVKDMK 326 Query: 338 VMP 340 VMP Sbjct: 327 VMP 329 >Q13Y85.1 Q13Y85_BURXL ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein Length = 343 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 206/307 (67%), Positives = 249/307 (81%) Query: 34 AAGVQAQEKVTVLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQ 93 A A + V++L++WYAQAEHGGFYQAVA GIYKKYG+DVTI+MGGPQVN MQ+L GQ Sbjct: 37 APPAHADDHVSLLTSWYAQAEHGGFYQAVATGIYKKYGLDVTIRMGGPQVNGMQLLAGGQ 96 Query: 94 ADFSMGYDFTVLKGIEQGLPLVTVGTSFQSDLQGMMTHADVANLGALKDKTILVAGSGQS 153 ADF +GYDF VL G+E G+P+ TV +FQ D QGMMTHADV +L LK+KTILVAGSG++ Sbjct: 97 ADFLLGYDFQVLSGVEAGIPVTTVAAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRT 156 Query: 154 SWWPWLKARYGYTDAQSKAYTFNLQPFFADPNTVQQAYPSSELFQAEKSGAKANFFLFAQ 213 +WWPWLKA+YGYT+AQ++ YTFNLQPFFADPN QAYPSSE FQAE++ A A+FFLFA Sbjct: 157 TWWPWLKAKYGYTEAQARPYTFNLQPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFAD 216 Query: 214 EGYPPYGTTIITLQKMVATKPDLVKRFVKATAEGWKSYLEDPSAGNALIKKDNKEMGDEQ 273 +GYPPY TTI+T++ V +PD+V RFVKA+ EGWKSYL DP+ GNALIKKDN +M D Q Sbjct: 217 DGYPPYNTTIVTMRDTVKNRPDVVARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQ 276 Query: 274 LAYAVRKLKELKVVTGGDAAKQGIGIMTDERWKKTYETMVATGLLKADVDWHKAYTTQFV 333 LAY V +LK+LK+VTGGDAA QGIG MTD RWKKT++ MV LLK D+H AYT QF+ Sbjct: 277 LAYGVAQLKKLKLVTGGDAATQGIGTMTDARWKKTFDYMVDARLLKPATDYHAAYTLQFI 336 Query: 334 KDMHVMP 340 ++ VMP Sbjct: 337 QNAKVMP 343 >D5NR65.1 D5NR65_9BURK NMT1/THI5 like domain protein Length = 407 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 201/303 (66%), Positives = 247/303 (81%) Query: 38 QAQEKVTVLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFS 97 A + V++L++WYAQAEHGGFYQAVA GIY+KYG+DVTI+MGGPQVN MQ+L GQADF Sbjct: 105 HADDHVSLLTSWYAQAEHGGFYQAVATGIYRKYGLDVTIRMGGPQVNGMQLLAGGQADFL 164 Query: 98 MGYDFTVLKGIEQGLPLVTVGTSFQSDLQGMMTHADVANLGALKDKTILVAGSGQSSWWP 157 +GYDF VL +E G+P+ TV +FQ D QGMMTHADV +L LK+KTILVAGSG+++WWP Sbjct: 165 LGYDFQVLSSVEAGIPVATVAAAFQYDPQGMMTHADVTSLAGLKNKTILVAGSGRTTWWP 224 Query: 158 WLKARYGYTDAQSKAYTFNLQPFFADPNTVQQAYPSSELFQAEKSGAKANFFLFAQEGYP 217 WLKA+YGYT+AQ++ YTFNLQPFFADPN QAYPSSE FQAE++ A A+FFLFA +GYP Sbjct: 225 WLKAKYGYTEAQARPYTFNLQPFFADPNVAMQAYPSSETFQAEQAHANAHFFLFADDGYP 284 Query: 218 PYGTTIITLQKMVATKPDLVKRFVKATAEGWKSYLEDPSAGNALIKKDNKEMGDEQLAYA 277 PY +TI+T++ + +PD+V RFVKA+ EGWKSYL DP+ GNALIKKDN +M D QLAY Sbjct: 285 PYNSTIVTMRDTMKNRPDVVARFVKASMEGWKSYLNDPAPGNALIKKDNPQMSDAQLAYG 344 Query: 278 VRKLKELKVVTGGDAAKQGIGIMTDERWKKTYETMVATGLLKADVDWHKAYTTQFVKDMH 337 V +LK+LK+VTGGDAA QGIG MTD RWKKT++ MV LLK D+H AYT QF+++ Sbjct: 345 VAQLKKLKLVTGGDAATQGIGTMTDARWKKTFDYMVDAKLLKPATDYHAAYTLQFIQNAK 404 Query: 338 VMP 340 VMP Sbjct: 405 VMP 407 >B1FSR1.1 B1FSR1_9BURK NMT1/THI5 like domain protein Length = 323 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/298 (65%), Positives = 234/298 (78%) Query: 43 VTVLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFSMGYDF 102 +TVL++WYAQAEHGGFYQAVA G+YK+ G+DVTI+MGGPQVN MQ+LV GQADF +GYDF Sbjct: 26 ITVLTSWYAQAEHGGFYQAVATGLYKRAGLDVTIRMGGPQVNGMQLLVGGQADFILGYDF 85 Query: 103 TVLKGIEQGLPLVTVGTSFQSDLQGMMTHADVANLGALKDKTILVAGSGQSSWWPWLKAR 162 VL IE G+P+ TV SFQ D QGM+TH DV L LK KTILVAGSG++SWWPWLK + Sbjct: 86 QVLSSIEAGIPVETVAASFQFDPQGMLTHDDVKGLSDLKGKTILVAGSGRTSWWPWLKEK 145 Query: 163 YGYTDAQSKAYTFNLQPFFADPNTVQQAYPSSELFQAEKSGAKANFFLFAQEGYPPYGTT 222 YGYTD Q++ YTFNLQPFF D N QAYPSSE FQAE++ K +FFLFA +GYPPY TT Sbjct: 146 YGYTDGQTRPYTFNLQPFFVDRNVAMQAYPSSEPFQAERANVKTHFFLFADDGYPPYNTT 205 Query: 223 IITLQKMVATKPDLVKRFVKATAEGWKSYLEDPSAGNALIKKDNKEMGDEQLAYAVRKLK 282 I+ ++K + KPD+V RFVKA+ EGWKSYL +P+ GN LI+KDN EM D QLA+ V +LK Sbjct: 206 IVGMKKSIDAKPDVVARFVKASMEGWKSYLSNPAPGNELIRKDNPEMTDAQLAFGVAQLK 265 Query: 283 ELKVVTGGDAAKQGIGIMTDERWKKTYETMVATGLLKADVDWHKAYTTQFVKDMHVMP 340 LK+VTGGDAA GIG MTD RWKKTY+ MV+ LLK D+ AYT ++V++ VMP Sbjct: 266 TLKLVTGGDAATLGIGAMTDARWKKTYDYMVSAKLLKPGTDYKSAYTLKYVQNAKVMP 323 >Q88HY9.1 Q88HY9_PSEPK ABC transporter, periplasmic binding component-related protein Length = 342 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 183/302 (60%), Positives = 229/302 (75%) Query: 39 AQEKVTVLSNWYAQAEHGGFYQAVAKGIYKKYGMDVTIKMGGPQVNNMQILVAGQADFSM 98 A +KV +L++WYAQAE GGFYQA+A G+Y+K G+DV+I+MGGPQVN MQ+LV+ QADF + Sbjct: 33 AGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGLDVSIRMGGPQVNGMQLLVSKQADFIV 92 Query: 99 GYDFTVLKGIEQGLPLVTVGTSFQSDLQGMMTHADVANLGALKDKTILVAGSGQSSWWPW 158 YD +LK +EQGLP+V V FQ D QG+MTHADV+ L AL K +LV+ SGQ +WWPW Sbjct: 93 NYDLQILKSVEQGLPVVAVAAPFQGDPQGLMTHADVSGLDALGGKPVLVSTSGQQTWWPW 152 Query: 159 LKARYGYTDAQSKAYTFNLQPFFADPNTVQQAYPSSELFQAEKSGAKANFFLFAQEGYPP 218 LK +Y D Q++ YTFNLQPF ADP T QQAY SSELFQA K+G NFFLFA GYPP Sbjct: 153 LKGKYQLADNQARPYTFNLQPFLADPQTTQQAYASSELFQAIKAGVTPNFFLFADAGYPP 212 Query: 219 YGTTIITLQKMVATKPDLVKRFVKATAEGWKSYLEDPSAGNALIKKDNKEMGDEQLAYAV 278 YG+T++T Q ++A P+ V FV+A+ EGWK YL+DPSAGNALIK+DN M DE LA+ V Sbjct: 213 YGSTVVTRQDIIAEHPERVAGFVRASMEGWKRYLDDPSAGNALIKRDNPNMTDELLAWGV 272 Query: 279 RKLKELKVVTGGDAAKQGIGIMTDERWKKTYETMVATGLLKADVDWHKAYTTQFVKDMHV 338 LK+ ++VTGG+AA QGIG MTD RW+ T + MV GLL D W AYTT+FV+D+ V Sbjct: 273 STLKQYRLVTGGEAATQGIGTMTDSRWQATRDFMVEAGLLGPDAPWRNAYTTRFVQDLKV 332 Query: 339 MP 340 +P Sbjct: 333 LP 334