BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0133.p         (40 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1Z5S3.1 B1Z5S3_BURA4 Ferredoxin                                       64   6e-09
Q0B329.1 Q0B329_BURCM Ferredoxin                                       64   6e-09
B1FBX4.1 B1FBX4_9BURK Ferredoxin                                       64   6e-09
D0IX35.1 D0IX35_COMT2 Ferredoxin                                       64   8e-09
D8D0I0.1 D8D0I0_COMTE Ferredoxin                                       64   8e-09

>B1Z5S3.1 B1Z5S3_BURA4 Ferredoxin
          Length = 323

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 32/40 (80%)

Query: 1   VLAGVPDHRDSVLTEKERASNQCLMPCVSRCRSERLVLDI 40
           VL G PDHRD+ L+  E+A N C+MPCVSRCR ERLVLD+
Sbjct: 284 VLEGTPDHRDAFLSAAEKARNDCMMPCVSRCRGERLVLDL 323


>Q0B329.1 Q0B329_BURCM Ferredoxin
          Length = 323

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 32/40 (80%)

Query: 1   VLAGVPDHRDSVLTEKERASNQCLMPCVSRCRSERLVLDI 40
           VL G PDHRD+ L+  E+A N C+MPCVSRCR ERLVLD+
Sbjct: 284 VLEGTPDHRDAFLSAAEKARNDCMMPCVSRCRGERLVLDL 323


>B1FBX4.1 B1FBX4_9BURK Ferredoxin
          Length = 323

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 32/40 (80%)

Query: 1   VLAGVPDHRDSVLTEKERASNQCLMPCVSRCRSERLVLDI 40
           VL G PDHRD+ L+  E+A N C+MPCVSRCR ERLVLD+
Sbjct: 284 VLEGTPDHRDAFLSAAEKARNDCMMPCVSRCRGERLVLDL 323


>D0IX35.1 D0IX35_COMT2 Ferredoxin
          Length = 320

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 1   VLAGVPDHRDSVLTEKERASNQCLMPCVSRCRSERLVLDI 40
           VL GVPDHRDSVL+ KERA N+ +M CVS C+SERLVLDI
Sbjct: 281 VLEGVPDHRDSVLSPKERAGNKVMMVCVSGCKSERLVLDI 320


>D8D0I0.1 D8D0I0_COMTE Ferredoxin
          Length = 319

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 34/40 (85%)

Query: 1   VLAGVPDHRDSVLTEKERASNQCLMPCVSRCRSERLVLDI 40
           VL GVPDHRDSVL+ KERA N+ +M CVS C+SERLVLDI
Sbjct: 280 VLEGVPDHRDSVLSPKERAGNKVMMVCVSGCKSERLVLDI 319