BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0089.p (351 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQM1.1 D8IQM1_HERSS ABC-type branched-chain amino acid transpo... 255 6e-66 D2ZCJ5.1 D2ZCJ5_9ENTR Putative amino acid ABC transporter, perip... 249 4e-64 A8AKN0.1 A8AKN0_CITK8 Putative uncharacterized protein 248 1e-63 Q0B9W3.1 Q0B9W3_BURCM Amino acid/amide ABC transporter substrate... 239 4e-61 B1FPE9.1 B1FPE9_9BURK Extracellular ligand-binding receptor 239 4e-61 >D8IQM1.1 D8IQM1_HERSS ABC-type branched-chain amino acid transport system, periplasmic component protein Length = 394 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 209/352 (59%), Gaps = 3/352 (0%) Query: 2 VVTIGFAAPLAEFSARQGR---NAAQLAIEEINKGNPSINGRAVVFELLEQDDKADPRIS 58 + IGFA PL+ S G+ N QLA+ E N+ I G++ L+ QDD+ADP + Sbjct: 39 TLAIGFAGPLSGPSGGVGKSMQNGVQLALAEANRRGLRIGGKSWQLRLIAQDDRADPATA 98 Query: 59 EFVARTLANSKAIGVVGHWTSATTGAAAPIYHGAGLAQISPFAWSRSLTQKSYRTIFQII 118 EFVAR+L + I VVGHWTS T+ AAAP+YH AG+ Q++P A SR LT SY IF+ I Sbjct: 99 EFVARSLVQQQVIAVVGHWTSGTSLAAAPVYHRAGVIQVTPSAMSRRLTAMSYPRIFRTI 158 Query: 119 GSDDLGLALAADYLVGEQKLKRVLVLDDGGFLGISMADYFSDHVKAADGEIIQRMSISGN 178 +++ LAA Y V + + + ++ +DD G +A+ F+ +++ R S+S Sbjct: 159 PNNESLGRLAAGYAVDKLETRTIVTIDDRTPFGQGLAEQFARTASERGAQVVGRYSVSDK 218 Query: 179 TSDFNQPLLKARESQAELIFFSGRMIQSDVLARNLQRFHLQAKLLLTGLVVSPAFLKNAG 238 TSDFN LL+AR+ Q +LIFF G Q+ VLA++++R L A+L+ + + FL AG Sbjct: 219 TSDFNAALLEARKLQPDLIFFGGLDWQAGVLAKSIRRLKLHARLMASPGTLGLPFLMRAG 278 Query: 239 DVDSAVLAIVPSTPLDKRPGMSALQKKYAERYGSEMLPFAVYFYDSVQLLAAAAKKANSL 298 + L + P P DK PG + +++Y+E + S+M +AV+ Y++ Q + ++A S Sbjct: 279 PDANGALVLEPGPPQDKMPGWKSFRQRYSENFDSDMDLYAVFAYEAAQAIIQGIRQAGSA 338 Query: 299 ERAKIVNALHEIRYSGISANIAFDANGALLKPGYTLYSYERKGWTPVRVFTG 350 + +I A+H +R+ G+S +AF+ G LL+P +T+Y + + W PV F G Sbjct: 339 DPERIAEAMHRLRFEGVSGPVAFNEEGDLLQPSFTMYEVKDQRWQPVARFNG 390 >D2ZCJ5.1 D2ZCJ5_9ENTR Putative amino acid ABC transporter, periplasmic amino acid-binding protein Length = 385 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 137/352 (38%), Positives = 202/352 (57%), Gaps = 3/352 (0%) Query: 2 VVTIGFAAPLAEFSARQGR---NAAQLAIEEINKGNPSINGRAVVFELLEQDDKADPRIS 58 V IG A PL SAR G+ N AQLAI++INK +P+I G+AV F+L +DD++DPR + Sbjct: 30 TVVIGLAGPLTGPSARIGKDLENGAQLAIDDINKQHPTIGGKAVTFKLQSEDDQSDPRTA 89 Query: 59 EFVARTLANSKAIGVVGHWTSATTGAAAPIYHGAGLAQISPFAWSRSLTQKSYRTIFQII 118 VA+ L +S GVVGHW + T+ AA +YH AG+AQ++P A + T++ + T F+++ Sbjct: 90 VAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDAGIAQVAPVATGHAYTKQGFDTSFRVM 149 Query: 119 GSDDLGLALAADYLVGEQKLKRVLVLDDGGFLGISMADYFSDHVKAADGEIIQRMSISGN 178 G DD G A Y V K KR+ V+DD G +AD F + A +I+ R + Sbjct: 150 GHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQGLADEFIKSLDAQGVKIVDRQYVDDK 209 Query: 179 TSDFNQPLLKARESQAELIFFSGRMIQSDVLARNLQRFHLQAKLLLTGLVVSPAFLKNAG 238 T DF+ L R A+LIFF G Q+ LAR +++ ++A L+ G VS FL+ A Sbjct: 210 TVDFSAVLTAIRSKNADLIFFGGVDSQAAPLARRIKQLGMKATLMGAGGFVSQTFLQLAQ 269 Query: 239 DVDSAVLAIVPSTPLDKRPGMSALQKKYAERYGSEMLPFAVYFYDSVQLLAAAAKKANSL 298 V+A+ P P+++ PG A ++ Y RY + + A + YD+ ++L AA +KA+S+ Sbjct: 270 KEGEGVVALEPGLPVEQMPGGKAFEQAYQSRYHTHIELHAPFAYDATRVLVAAMEKADSV 329 Query: 299 ERAKIVNALHEIRYSGISANIAFDANGALLKPGYTLYSYERKGWTPVRVFTG 350 + A + AL I YSG++ IAFD G L P +T+Y W P V G Sbjct: 330 DPADYLPALRAISYSGVTGQIAFDKEGNLTSPSFTVYKVVDGKWQPQTVLGG 381 >A8AKN0.1 A8AKN0_CITK8 Putative uncharacterized protein Length = 385 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 136/352 (38%), Positives = 202/352 (57%), Gaps = 3/352 (0%) Query: 2 VVTIGFAAPLAEFSARQGR---NAAQLAIEEINKGNPSINGRAVVFELLEQDDKADPRIS 58 V IG A PL SAR G+ N AQLAI++INK +P+I G+AV F L +DD++DPR + Sbjct: 30 TVAIGLAGPLTGPSARIGKDLENGAQLAIDDINKQHPTIGGKAVTFRLQSEDDQSDPRTA 89 Query: 59 EFVARTLANSKAIGVVGHWTSATTGAAAPIYHGAGLAQISPFAWSRSLTQKSYRTIFQII 118 VA+ L +S GVVGHW + T+ AA +YH AG+AQ++P A + T++ + T F+++ Sbjct: 90 VAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDAGIAQVAPVATGHAYTRQGFDTSFRVM 149 Query: 119 GSDDLGLALAADYLVGEQKLKRVLVLDDGGFLGISMADYFSDHVKAADGEIIQRMSISGN 178 G DD G A Y V K KR+ V+DD G +AD F ++A +I+ R + Sbjct: 150 GHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQGLADEFIKSLEAQGVKIVDRQYVDDK 209 Query: 179 TSDFNQPLLKARESQAELIFFSGRMIQSDVLARNLQRFHLQAKLLLTGLVVSPAFLKNAG 238 T DF+ L R A+LIFF G Q+ LAR +++ + A L+ G VS FL+ A Sbjct: 210 TVDFSAVLTAIRSKNADLIFFGGVDSQAAPLARRIKQLGMNATLMGAGGFVSQTFLQLAQ 269 Query: 239 DVDSAVLAIVPSTPLDKRPGMSALQKKYAERYGSEMLPFAVYFYDSVQLLAAAAKKANSL 298 V+A+ P P+++ PG A +++Y RY + + A + YD+ ++L AA +KA+S+ Sbjct: 270 KEGEGVVALEPGLPVEQMPGGKAFEQEYQSRYHTHIELHAPFAYDATRVLVAAMEKADSV 329 Query: 299 ERAKIVNALHEIRYSGISANIAFDANGALLKPGYTLYSYERKGWTPVRVFTG 350 + A+ + L I YSG++ IAFD G L P +T+Y W P V G Sbjct: 330 DPAEYLPVLRAISYSGVTGQIAFDNEGNLKSPSFTVYKVVDGKWQPQTVLGG 381 >Q0B9W3.1 Q0B9W3_BURCM Amino acid/amide ABC transporter substrate-binding protein, HAAT family Length = 388 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 135/352 (38%), Positives = 196/352 (55%), Gaps = 3/352 (0%) Query: 2 VVTIGFAAPLAEFSARQGR---NAAQLAIEEINKGNPSINGRAVVFELLEQDDKADPRIS 58 + IG AAPL SAR G+ N AQLAI++ N +PSI G+ VV++L+ DD++DPR + Sbjct: 31 TILIGLAAPLTGPSARIGKDLQNGAQLAIDDANAEHPSIGGKPVVYKLVAADDQSDPRTA 90 Query: 59 EFVARTLANSKAIGVVGHWTSATTGAAAPIYHGAGLAQISPFAWSRSLTQKSYRTIFQII 118 VA+ L + IGVVGHW + + A+ +Y AG+AQI+P + TQ+ Y T F+I+ Sbjct: 91 VAVAQQLVDQHVIGVVGHWNTGCSVPASRVYRDAGIAQIAPASTGHQYTQQGYATAFRIM 150 Query: 119 GSDDLGLALAADYLVGEQKLKRVLVLDDGGFLGISMADYFSDHVKAADGEIIQRMSISGN 178 G DD G Y V K KR+ V+DD G +AD F V+A G I+ R ++ Sbjct: 151 GHDDAGGNFTGAYAVKTLKAKRIAVIDDRTSFGAGLADQFIKGVQANGGTIVDRQYVNDK 210 Query: 179 TSDFNQPLLKARESQAELIFFSGRMIQSDVLARNLQRFHLQAKLLLTGLVVSPAFLKNAG 238 T+DF+ L + +A+L+FF G Q+ +AR +++ + A LL G VS FL AG Sbjct: 211 TTDFSGVLTAIKGKRADLVFFGGLDAQAAPIARRMRQLGVNAPLLGAGGFVSQTFLSLAG 270 Query: 239 DVDSAVLAIVPSTPLDKRPGMSALQKKYAERYGSEMLPFAVYFYDSVQLLAAAAKKANSL 298 V A+ P PLD+ PG +A +Y R+ + + A + YD+ L AA +KA S Sbjct: 271 KDGEGVTALEPGLPLDRMPGGNAFDAQYRARWHAPIELHAPFAYDAAATLIAAVQKAGST 330 Query: 299 ERAKIVNALHEIRYSGISANIAFDANGALLKPGYTLYSYERKGWTPVRVFTG 350 + AK+V A+ I G++ +AFD G L P +T+Y WT V V G Sbjct: 331 QPAKVVAAVRAIDRPGVTGRVAFDQQGNLKDPAFTIYQVRGGKWTVVDVLGG 382 >B1FPE9.1 B1FPE9_9BURK Extracellular ligand-binding receptor Length = 388 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 196/352 (55%), Gaps = 3/352 (0%) Query: 2 VVTIGFAAPLAEFSARQGR---NAAQLAIEEINKGNPSINGRAVVFELLEQDDKADPRIS 58 + IG AAPL SAR G+ N AQLAI++ N +PSI G+ VV++L+ DD++DPR + Sbjct: 31 TILIGLAAPLTGPSARIGKDLQNGAQLAIDDANAKHPSIGGKPVVYKLVAADDQSDPRTA 90 Query: 59 EFVARTLANSKAIGVVGHWTSATTGAAAPIYHGAGLAQISPFAWSRSLTQKSYRTIFQII 118 VA+ L + IGVVGHW + + A+ +Y AG+AQI+P + TQ+ Y T F+I+ Sbjct: 91 VAVAQQLVDQHVIGVVGHWNTGCSVPASRVYRDAGIAQIAPASTGHQYTQQGYATAFRIM 150 Query: 119 GSDDLGLALAADYLVGEQKLKRVLVLDDGGFLGISMADYFSDHVKAADGEIIQRMSISGN 178 G DD G Y V K KR+ V+DD G +AD F V+A G I+ R ++ Sbjct: 151 GHDDAGGNFTGAYAVKTLKAKRIAVIDDRTSFGAGLADQFIKGVQANGGAIVDRQYVNDK 210 Query: 179 TSDFNQPLLKARESQAELIFFSGRMIQSDVLARNLQRFHLQAKLLLTGLVVSPAFLKNAG 238 T+DF+ L + +A+L+FF G Q+ +AR +++ + A LL G VS FL AG Sbjct: 211 TTDFSGVLTAIKGKRADLVFFGGLDAQAAPIARRMRQLGVNAPLLGAGGFVSQTFLSLAG 270 Query: 239 DVDSAVLAIVPSTPLDKRPGMSALQKKYAERYGSEMLPFAVYFYDSVQLLAAAAKKANSL 298 V A+ P PLD+ PG A +Y R+ + + A + YD+ L AA +KA + Sbjct: 271 KDGEGVTALEPGLPLDRMPGGKAFDAQYRARWHAPIELHAPFAYDAAATLIAATQKAGTT 330 Query: 299 ERAKIVNALHEIRYSGISANIAFDANGALLKPGYTLYSYERKGWTPVRVFTG 350 + AK+V A+ I +G++ +AFD G L P +T+Y WT V V G Sbjct: 331 QPAKVVAAVRAIDRAGVTGRVAFDQQGNLKDPAFTIYQVRGGKWTVVDVLGG 382