BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0053.p (304 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWB4.1 D8IWB4_HERSS Ribosomal protein L11 methyltransferase EC... 491 e-137 A4G8P4.1 PRMA_HERAR Ribosomal protein L11 methyltransferase EC=2... 446 e-123 F1W4E5.1 F1W4E5_9BURK Ribosomal protein L11 methyltransferase 435 e-120 A6T2B6.1 PRMA_JANMA Ribosomal protein L11 methyltransferase EC=2... 433 e-119 B1JVC0.1 PRMA_BURCC Ribosomal protein L11 methyltransferase EC=2... 389 e-106 >D8IWB4.1 D8IWB4_HERSS Ribosomal protein L11 methyltransferase EC=2.1.1.- Length = 304 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 244/303 (80%), Positives = 268/303 (88%), Gaps = 1/303 (0%) Query: 1 MGWTEIVIQVTRDQAEALSDALMESGALSVSVEDADEGTVAEQPLFGEPGMEPTEAAWER 60 M W EIVI+V R++AEALSDALMESGALSVSVEDADEGT AE+PLFGEPGMEP EAAW+R Sbjct: 1 MAWVEIVIEVAREEAEALSDALMESGALSVSVEDADEGTDAERPLFGEPGMEPEEAAWDR 60 Query: 61 SRVVALADVDADHATIVNDAAKAIGLDYALPFALRSVEEQDWVRLTQSQFEPIHIGKRIW 120 SRVVALA DADHATIV DAAKAIGLDYALPF+ R VEEQDWVRLTQSQFEPIHIGKRIW Sbjct: 61 SRVVALAGKDADHATIVMDAAKAIGLDYALPFSTRVVEEQDWVRLTQSQFEPIHIGKRIW 120 Query: 121 VVPSWHDAP-EPDALVLELDPGLAFGTGSHPTTRLCMEWLEQHAVDAATVLDYGCGSGIL 179 VVPSWH+AP +PDALVLELDPGLAFGTGSHPTTRLCMEWLE +A +A T+LDYGCGSGIL Sbjct: 121 VVPSWHEAPADPDALVLELDPGLAFGTGSHPTTRLCMEWLEANATEAGTLLDYGCGSGIL 180 Query: 180 ALVARKLGAQHVIGVDIDPQALESARFNSERNACDIEYHLPEAFVRSYPENQTFAIVVAN 239 ALVA K+G VIGVDIDPQALE+A N+ERN C Y+LPE F +++PE + F +VVAN Sbjct: 181 ALVAAKIGVPQVIGVDIDPQALEAAHHNTERNHCTATYYLPEPFAQAHPEGERFDVVVAN 240 Query: 240 ILAGPLQLMAPMLAGRVAPGGSLVLSGVLDRQAQDVIAAYAPYLELSVWAEHEGWVALAG 299 ILAGPLQLMAPMLAGRV GGSLVLSGVL+RQAQ+VIA YAPY+ L+VWA HEGWVALAG Sbjct: 241 ILAGPLQLMAPMLAGRVRAGGSLVLSGVLERQAQEVIATYAPYIALNVWAAHEGWVALAG 300 Query: 300 RAP 302 R P Sbjct: 301 RLP 303 >A4G8P4.1 PRMA_HERAR Ribosomal protein L11 methyltransferase EC=2.1.1.- Length = 309 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 223/303 (73%), Positives = 253/303 (83%), Gaps = 2/303 (0%) Query: 1 MGWTEIVIQVTRDQAEALSDALMESGALSVSVEDADEGTVAEQPLFGEPGMEPTEAAWER 60 M WTEIVI+V R AEALSDAL ++GALSVSVEDAD GT AEQPLFGEPGMEPTEAAWER Sbjct: 1 MSWTEIVIEVARTHAEALSDALFDAGALSVSVEDADFGTDAEQPLFGEPGMEPTEAAWER 60 Query: 61 SRVVALADVDADHATIVNDAAKAIGLDYA-LPFALRSVEEQDWVRLTQSQFEPIHIGKRI 119 SRVVAL V+AD A IV +AA++IGL A L F LR+V++QDWVRLTQSQFEPIHIGK I Sbjct: 61 SRVVALTPVEADQAAIVAEAAESIGLAAADLAFTLRNVDDQDWVRLTQSQFEPIHIGKNI 120 Query: 120 WVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQHAVDAATVLDYGCGSGIL 179 WVVPSWHD P+P ALVLELDPGLAFGTGSHPTTRLCMEWLE HA +VLDYGCGSGIL Sbjct: 121 WVVPSWHDVPDPAALVLELDPGLAFGTGSHPTTRLCMEWLEAHAPIGLSVLDYGCGSGIL 180 Query: 180 ALVARKLGAQHVIGVDIDPQALESARFNSERNACDIEYHLPEAFVRSYPENQTFAIVVAN 239 A++A+KL A V+G+DIDPQA++SA FN+ERN CD+ Y+LP+ F S TF +VVAN Sbjct: 181 AMIAKKLDADTVVGIDIDPQAIQSAVFNTERNHCDVAYYLPDEFAASG-HAHTFDVVVAN 239 Query: 240 ILAGPLQLMAPMLAGRVAPGGSLVLSGVLDRQAQDVIAAYAPYLELSVWAEHEGWVALAG 299 ILA PL+LMAPMLAGRV PGG LVLSGVL Q +V AAYAP++ L+VWAE EGWVALAG Sbjct: 240 ILANPLKLMAPMLAGRVNPGGQLVLSGVLATQVDEVTAAYAPFIALTVWAEQEGWVALAG 299 Query: 300 RAP 302 R+P Sbjct: 300 RSP 302 >F1W4E5.1 F1W4E5_9BURK Ribosomal protein L11 methyltransferase Length = 307 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/303 (73%), Positives = 246/303 (81%), Gaps = 4/303 (1%) Query: 1 MGWTEIVIQVTRDQAEALSDALMESGALSVSVEDADEGTVAEQPLFGEPGMEPTEAAWER 60 M WTEIVI+V RDQAE+LSDALME+GALSVSVEDADEGT AEQPLFGEPGMEP +AAWER Sbjct: 1 MSWTEIVIEVARDQAESLSDALMEAGALSVSVEDADEGTAAEQPLFGEPGMEPEQAAWER 60 Query: 61 SRVVALADVDADHATIVNDAAKAIGLDYA---LPFALRSVEEQDWVRLTQSQFEPIHIGK 117 SRVV L D +D ++ +A GL A LPF+LRSVEEQDWVRLTQSQF PIHIG Sbjct: 61 SRVVVLTDSGSDADALIAEAIVIAGLPLAAADLPFSLRSVEEQDWVRLTQSQFAPIHIGT 120 Query: 118 RIWVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQHAVDAATVLDYGCGSG 177 IWVVPSWHDAP+PD L+LELDPGLAFGTGSHPTTRLCMEWLE HA +VLDYGCGSG Sbjct: 121 NIWVVPSWHDAPDPDGLILELDPGLAFGTGSHPTTRLCMEWLEVHAPAELSVLDYGCGSG 180 Query: 178 ILALVARKLGAQHVIGVDIDPQALESARFNSERNACDIEYHLPEAFVRSYPENQTFAIVV 237 ILALVA KLGA VIGVDIDPQA+ESA FNSERN C+I+Y LP+ F Q F IVV Sbjct: 181 ILALVASKLGAATVIGVDIDPQAIESANFNSERNDCEIDYFLPDEF-HHDDVLQRFDIVV 239 Query: 238 ANILAGPLQLMAPMLAGRVAPGGSLVLSGVLDRQAQDVIAAYAPYLELSVWAEHEGWVAL 297 ANIL+GPL++MAPML +A +LVLSGVL QA DVIAAYAP+L LSVWAE EGWVAL Sbjct: 240 ANILSGPLKVMAPMLCAHLADDAALVLSGVLATQADDVIAAYAPFLHLSVWAEREGWVAL 299 Query: 298 AGR 300 +G+ Sbjct: 300 SGK 302 >A6T2B6.1 PRMA_JANMA Ribosomal protein L11 methyltransferase EC=2.1.1.- Length = 310 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/303 (73%), Positives = 254/303 (83%), Gaps = 2/303 (0%) Query: 1 MGWTEIVIQVTRDQAEALSDALMESGALSVSVEDADEGTVAEQPLFGEPGMEPTEAAWER 60 M WTEIVI+V R AEALSDALME+GALSVSVEDAD GT AEQPLFGEPGMEPTEAAWE Sbjct: 1 MSWTEIVIEVARTHAEALSDALMEAGALSVSVEDADFGTDAEQPLFGEPGMEPTEAAWEH 60 Query: 61 SRVVALADVDADHATIVNDAAKAIGLDYA-LPFALRSVEEQDWVRLTQSQFEPIHIGKRI 119 SRVVAL V+AD A IV +AA+A+GL + F LR+VEEQDWVRLTQSQFEPIHIGK I Sbjct: 61 SRVVALTPVEADQAAIVAEAAQAVGLAATDVAFTLRAVEEQDWVRLTQSQFEPIHIGKNI 120 Query: 120 WVVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQHAVDAATVLDYGCGSGIL 179 WVVPSWHDAP+P ALVLELDPGLAFGTGSHPTTRLCMEWLE H +VLDYGCGSGIL Sbjct: 121 WVVPSWHDAPDPQALVLELDPGLAFGTGSHPTTRLCMEWLEAHPPVGLSVLDYGCGSGIL 180 Query: 180 ALVARKLGAQHVIGVDIDPQALESARFNSERNACDIEYHLPEAFVRSYPENQTFAIVVAN 239 A+VA KLG+ VIG+DIDPQA++SA FN+ERN C++ Y+LP+ F S TF +VVAN Sbjct: 181 AMVAAKLGSTDVIGIDIDPQAIKSALFNTERNHCEVAYYLPDEFASSG-HAHTFDVVVAN 239 Query: 240 ILAGPLQLMAPMLAGRVAPGGSLVLSGVLDRQAQDVIAAYAPYLELSVWAEHEGWVALAG 299 ILA PL++MAPML+GRV PGG L+LSGVL Q ++V AAYAP+++LSVWAEHEGWVALAG Sbjct: 240 ILANPLKVMAPMLSGRVKPGGKLILSGVLATQVEEVSAAYAPFIKLSVWAEHEGWVALAG 299 Query: 300 RAP 302 + P Sbjct: 300 QLP 302 >B1JVC0.1 PRMA_BURCC Ribosomal protein L11 methyltransferase EC=2.1.1.- Length = 300 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 198/299 (66%), Positives = 232/299 (77%), Gaps = 5/299 (1%) Query: 1 MGWTEIVIQVTRDQAEALSDALMESGALSVSVEDADEGTVAEQPLFGEPGMEPTEAAWER 60 M + E+V+++ R+ AEALSDAL++ GALSVSVEDAD T EQPLFGEPG+ P AW+ Sbjct: 1 MSYRELVVELAREHAEALSDALLDLGALSVSVEDADADTPDEQPLFGEPGLVPDRTAWQH 60 Query: 61 SRVVALADVDADHATIVNDAAKAIGLDYALPFALRSVEEQDWVRLTQSQFEPIHIGKRIW 120 SRVVAL D + A ++ AA IGL F +R VEEQDWVRLTQSQFEPI IG+RIW Sbjct: 61 SRVVALLSADHEPAVLLAAAANEIGLAETPKFVVREVEEQDWVRLTQSQFEPIPIGERIW 120 Query: 121 VVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQHAVDAATVLDYGCGSGILA 180 VVPSWHDAP+PDALVLELDPGLAFGTGSHPTTRLCMEWLEQ +VLDYGCGSGILA Sbjct: 121 VVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQSVKPGQSVLDYGCGSGILA 180 Query: 181 LVARKLGAQHVIGVDIDPQALESARFNSERNACDIEYHLPEAFVRSYPENQTFAIVVANI 240 ++A+K GA VIG+DIDPQA+ESAR NSERN ++ Y LP+A PE + F IVVANI Sbjct: 181 ILAKKCGANPVIGIDIDPQAVESARQNSERNRAEVTYGLPDAC----PEGE-FDIVVANI 235 Query: 241 LAGPLQLMAPMLAGRVAPGGSLVLSGVLDRQAQDVIAAYAPYLELSVWAEHEGWVALAG 299 L+ PL+LMA MLA +V PGG + LSGVL RQA +V A YA Y+++SVW EHEGWV LAG Sbjct: 236 LSNPLKLMASMLASKVKPGGRIALSGVLARQADEVAAVYARYVDISVWREHEGWVCLAG 294