BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0029.p         (197 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IW96.1 D8IW96_HERSS RNA pyrophosphohydrolase EC=3.6.1.-             319   1e-85
A4G8R1.1 RPPH_HERAR RNA pyrophosphohydrolase EC=3.6.1.-               317   5e-85
A6T2D2.1 RPPH_JANMA RNA pyrophosphohydrolase EC=3.6.1.-               311   2e-83
F1VY73.1 F1VY73_9BURK Adenosine (5')-pentaphospho-(5'')-adenosin...   310   9e-83
A3NDS3.1 RPPH_BURP6 RNA pyrophosphohydrolase EC=3.6.1.-               293   1e-77

>D8IW96.1 D8IW96_HERSS RNA pyrophosphohydrolase EC=3.6.1.-
          Length = 194

 Score =  319 bits (817), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/171 (89%), Positives = 159/171 (92%)

Query: 1   MLDREGFRPNVGIILLNAQNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60
           MLDREGFRPNVGIILLNA NEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL
Sbjct: 1   MLDREGFRPNVGIILLNANNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60

Query: 61  KAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120
           +AEHVKIIGRTRDWLRYEVPDHFIKRE+RGHYRGQKQIWFLLRMVGRDCDVNLR TSHPE
Sbjct: 61  RAEHVKIIGRTRDWLRYEVPDHFIKREVRGHYRGQKQIWFLLRMVGRDCDVNLRGTSHPE 120

Query: 121 FDAWRWHDYWVPLDVVIEFKRDVYQQALKELSRFLARPHAAHRRPDAAGKT 171
           FDAWRWHDYWVPLDVVIEFKR+VYQQAL+ELSRFL RP    RR +   + 
Sbjct: 121 FDAWRWHDYWVPLDVVIEFKREVYQQALQELSRFLNRPGQGARRHEPTARA 171


>A4G8R1.1 RPPH_HERAR RNA pyrophosphohydrolase EC=3.6.1.-
          Length = 193

 Score =  317 bits (812), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 156/190 (82%), Positives = 166/190 (87%), Gaps = 3/190 (1%)

Query: 1   MLDREGFRPNVGIILLNAQNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60
           MLDREGFRPNVGIIL+NAQNEVWWGKRVREHSWQFPQGGIK GETPEQAMFRELEEE+GL
Sbjct: 1   MLDREGFRPNVGIILINAQNEVWWGKRVREHSWQFPQGGIKFGETPEQAMFRELEEEVGL 60

Query: 61  KAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120
           +AEHVKIIGRTRDWLRYEVPDHFIKREIRGHY+GQKQIWFLLRMVGRDCDVNLRLT HPE
Sbjct: 61  RAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYKGQKQIWFLLRMVGRDCDVNLRLTEHPE 120

Query: 121 FDAWRWHDYWVPLDVVIEFKRDVYQQALKELSRFLARP-HAA--HRRPDAAGKTEHASSD 177
           FDAWRWHDYWVPLDVVIEFKRDVYQ+AL+ELSRFL+RP H A  H       +T  A   
Sbjct: 121 FDAWRWHDYWVPLDVVIEFKRDVYQRALQELSRFLSRPAHPAPIHNTARYLRQTHSARKT 180

Query: 178 HPGNAQQADP 187
              + +Q  P
Sbjct: 181 DEPSTEQTKP 190


>A6T2D2.1 RPPH_JANMA RNA pyrophosphohydrolase EC=3.6.1.-
          Length = 194

 Score =  311 bits (798), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/158 (91%), Positives = 155/158 (98%)

Query: 1   MLDREGFRPNVGIILLNAQNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60
           MLDREGFRPNVGIIL+N +NEVWWGKRVREHSWQFPQGGIK GETPEQAM+RELEEE+GL
Sbjct: 1   MLDREGFRPNVGIILINTRNEVWWGKRVREHSWQFPQGGIKFGETPEQAMYRELEEEVGL 60

Query: 61  KAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120
           +AEHVKIIGRTRDWLRYEVPDHFIKREIRGHY+GQKQIWFLLRMVGRDCDVNLR+T HPE
Sbjct: 61  RAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYKGQKQIWFLLRMVGRDCDVNLRMTEHPE 120

Query: 121 FDAWRWHDYWVPLDVVIEFKRDVYQQALKELSRFLARP 158
           FDAWRWHDYWVPLDVVIEFKRDVYQ+AL+ELSRFL+RP
Sbjct: 121 FDAWRWHDYWVPLDVVIEFKRDVYQRALQELSRFLSRP 158


>F1VY73.1 F1VY73_9BURK Adenosine (5')-pentaphospho-(5'')-adenosine
           pyrophosphohydrolase
          Length = 194

 Score =  310 bits (793), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 154/195 (78%), Positives = 165/195 (84%), Gaps = 6/195 (3%)

Query: 1   MLDREGFRPNVGIILLNAQNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60
           MLDREGFRPNVGIILLN  NEVWWGKRVREHSWQFPQGGIK+GETPEQAMFRELEEEIGL
Sbjct: 1   MLDREGFRPNVGIILLNTHNEVWWGKRVREHSWQFPQGGIKYGETPEQAMFRELEEEIGL 60

Query: 61  KAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120
           +AEHVKI+GRTRDWLRYEVPD FIKR+IRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE
Sbjct: 61  RAEHVKIVGRTRDWLRYEVPDRFIKRDIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120

Query: 121 FDAWRWHDYWVPLDVVIEFKRDVYQQALKELSRFLARP--HAAHRRPDAAGKTEHASSDH 178
           FDAWRWH+YWVPLDVVIEFKRDVYQ+AL+ELSR+L+RP   A  R P    + +    D 
Sbjct: 121 FDAWRWHEYWVPLDVVIEFKRDVYQRALQELSRYLSRPLIDAPARPPHRHQRQDMIIDDE 180

Query: 179 PGNAQQADPCGSATP 193
           P    Q  P     P
Sbjct: 181 P----QPMPAAPQAP 191


>A3NDS3.1 RPPH_BURP6 RNA pyrophosphohydrolase EC=3.6.1.-
          Length = 216

 Score =  293 bits (749), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/202 (72%), Positives = 157/202 (77%), Gaps = 11/202 (5%)

Query: 1   MLDREGFRPNVGIILLNAQNEVWWGKRVREHSWQFPQGGIKHGETPEQAMFRELEEEIGL 60
           MLDREGFRPNVGIILLNA NEV+WGKR+REHSWQFPQGGIK+GETP QAM+REL EE GL
Sbjct: 1   MLDREGFRPNVGIILLNAHNEVFWGKRLREHSWQFPQGGIKYGETPMQAMYRELHEETGL 60

Query: 61  KAEHVKIIGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMVGRDCDVNLRLTSHPE 120
             EHVKIIGRTRDWLRYEVPD FIKRE+RGHYRGQKQIWFLLRMVGRDCD+ LR T HPE
Sbjct: 61  LPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATDHPE 120

Query: 121 FDAWRWHDYWVPLDVVIEFKRDVYQQALKELSRFLARPHA---------AHRRPDAAGKT 171
           FDAWRW++YWVPLD VIEFKRDVYQ AL ELSRFL RP           A R P  A   
Sbjct: 121 FDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAQRTDKSRGPRAPRYPRVANG- 179

Query: 172 EHASSDHPGNAQQADPCGSATP 193
            HA+S+ P     +  C    P
Sbjct: 180 -HAASETPAAIDTSAVCSEVEP 200