BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0024.p         (87 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G8R5.1 RL27_HERAR 50S ribosomal protein L27                         157   7e-37
F1VY69.1 F1VY69_9BURK LSU ribosomal protein L27p                      154   4e-36
A6T2D6.1 RL27_JANMA 50S ribosomal protein L27                         151   4e-35
D8IW92.1 D8IW92_HERSS 50S ribosomal protein L27                       146   1e-33
C3X549.1 C3X549_OXAFO 50S ribosomal protein L27                       146   1e-33

>A4G8R5.1 RL27_HERAR 50S ribosomal protein L27
          Length = 85

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 80/85 (94%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQ INAGGIIIRQRGTKVHPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQVINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          ALT+GKV FVIKG  +RQYVTVV A
Sbjct: 61 ALTDGKVAFVIKGALQRQYVTVVPA 85


>F1VY69.1 F1VY69_9BURK LSU ribosomal protein L27p
          Length = 85

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTK HPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKTHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          AL  GKVQF++KG  +RQ+VTVV A
Sbjct: 61 ALIPGKVQFLVKGATQRQFVTVVPA 85


>A6T2D6.1 RL27_JANMA 50S ribosomal protein L27
          Length = 85

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/85 (87%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGII+RQRGTK+HPGENVG+GKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIVRQRGTKMHPGENVGIGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          ALT+GKV FV KG  +R YVTVV A
Sbjct: 61 ALTDGKVAFVTKGALQRHYVTVVPA 85


>D8IW92.1 D8IW92_HERSS 50S ribosomal protein L27
          Length = 85

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 79/85 (92%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGRDSESKRLGVKVYGGQ INAGGII+RQRGT+VH GENVG+GKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQVINAGGIIVRQRGTRVHAGENVGVGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAA 85
          AL +GKV+FV+KG+ +RQY TVV A
Sbjct: 61 ALKDGKVKFVVKGLQQRQYATVVPA 85


>C3X549.1 C3X549_OXAFO 50S ribosomal protein L27
          Length = 88

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 79/87 (90%)

Query: 1  MAHKKGGGTTRNGRDSESKRLGVKVYGGQAINAGGIIIRQRGTKVHPGENVGMGKDHTLF 60
          MAHKKGGGTTRNGR+SESKRLGVKVYGGQ INAGGII+RQRGT +HPGENVGMGKDHTLF
Sbjct: 1  MAHKKGGGTTRNGRESESKRLGVKVYGGQTINAGGIIMRQRGTTIHPGENVGMGKDHTLF 60

Query: 61 ALTEGKVQFVIKGVAKRQYVTVVAAAA 87
          AL +G V+FV++G AK+ + TVV AAA
Sbjct: 61 ALIDGTVKFVVRGEAKKHFATVVPAAA 87