BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0009.p         (111 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZ53.1 D8IZ53_HERSS ABC-type amino acid transport system, ATPa...   182   1e-44
F1W2W9.1 F1W2W9_9BURK ABC transporter-like protein                    178   3e-43
A6GPF0.1 A6GPF0_9BURK ABC-type transporter, ATPase component: HA...   166   9e-40
Q46NP4.1 Q46NP4_CUPPJ ABC transporter related                         159   9e-38
D8NUZ2.1 D8NUZ2_RALSO Putative branched-chain amino acid transpo...   156   1e-36

>D8IZ53.1 D8IZ53_HERSS ABC-type amino acid transport system, ATPase component
           protein
          Length = 256

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 85/98 (86%), Positives = 93/98 (94%)

Query: 1   VPTSGQILFNGRDITMEAPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF 60
           VPTSGQILFNGRDITM+APAQIARQGIIRSFQISAVFPH+SV+ENVRIGLQR LGTSFHF
Sbjct: 56  VPTSGQILFNGRDITMDAPAQIARQGIIRSFQISAVFPHMSVLENVRIGLQRKLGTSFHF 115

Query: 61  WKSSDSLKQLNDRAMALLDEVDLTSFADTLTVDLPYGR 98
           WK+ +SLKQL++RAM LL+EVDLTSFA T TVDLPYGR
Sbjct: 116 WKNGESLKQLDERAMQLLEEVDLTSFAHTTTVDLPYGR 153


>F1W2W9.1 F1W2W9_9BURK ABC transporter-like protein
          Length = 233

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/98 (86%), Positives = 87/98 (88%)

Query: 1   VPTSGQILFNGRDITMEAPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF 60
           VPTSG ILFNG+DIT   PAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF
Sbjct: 33  VPTSGHILFNGKDITSAKPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF 92

Query: 61  WKSSDSLKQLNDRAMALLDEVDLTSFADTLTVDLPYGR 98
           WKS  SL  LNDRAMALL EVDL  FADT+TVDLPYGR
Sbjct: 93  WKSERSLASLNDRAMALLAEVDLAEFADTITVDLPYGR 130


>A6GPF0.1 A6GPF0_9BURK ABC-type transporter, ATPase component: HAAT family
           protein
          Length = 256

 Score =  166 bits (421), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 79/97 (81%), Positives = 84/97 (86%)

Query: 2   PTSGQILFNGRDITMEAPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHFW 61
           PTSGQILFNG+DIT   PAQIARQGIIRSFQISAVFPHL+V+ENVRIGLQR LG SFHFW
Sbjct: 57  PTSGQILFNGKDITSAKPAQIARQGIIRSFQISAVFPHLTVLENVRIGLQRPLGNSFHFW 116

Query: 62  KSSDSLKQLNDRAMALLDEVDLTSFADTLTVDLPYGR 98
           +S   L  LND+AMALL  VDL SFADTLTVDLPYGR
Sbjct: 117 RSEKKLSVLNDKAMALLALVDLESFADTLTVDLPYGR 153


>Q46NP4.1 Q46NP4_CUPPJ ABC transporter related
          Length = 256

 Score =  159 bits (403), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 85/98 (86%)

Query: 1   VPTSGQILFNGRDITMEAPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF 60
           VPTSG IL+NGRD+T   PAQ+A+ GIIRSFQISAVFPH++V+ENVRIGLQR LGTSFHF
Sbjct: 56  VPTSGSILYNGRDVTGSRPAQLAKDGIIRSFQISAVFPHMTVLENVRIGLQRALGTSFHF 115

Query: 61  WKSSDSLKQLNDRAMALLDEVDLTSFADTLTVDLPYGR 98
           W+SS  L+QL+ RAM LLDEVDL  FAD +TVDLPYGR
Sbjct: 116 WRSSRLLQQLDARAMELLDEVDLREFADMVTVDLPYGR 153


>D8NUZ2.1 D8NUZ2_RALSO Putative branched-chain amino acid transport system
           permease, ATP binding component EC=3.6.3.17
          Length = 256

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 84/98 (85%)

Query: 1   VPTSGQILFNGRDITMEAPAQIARQGIIRSFQISAVFPHLSVMENVRIGLQRTLGTSFHF 60
           VPT G ILFNG DIT E PAQIAR+G+IRSFQISAVFPHLSV+ENVR+GLQR LGT++ F
Sbjct: 57  VPTRGTILFNGTDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRVGLQRQLGTAYAF 116

Query: 61  WKSSDSLKQLNDRAMALLDEVDLTSFADTLTVDLPYGR 98
           W+S  +L  LNDRAM LLD+V LT FADT+TV+LPYGR
Sbjct: 117 WRSEKTLSVLNDRAMQLLDQVGLTQFADTVTVELPYGR 154