BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0008.p (307 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9Z2C0.1 B9Z2C0_9NEIS Transcriptional regulator, LysR family 299 4e-79 Q02TW5.1 Q02TW5_PSEAB Putative transcriptional regulator, LysR f... 292 4e-77 B7V433.1 B7V433_PSEA8 Probable transcriptional regulator 292 4e-77 A3KZY2.1 A3KZY2_PSEAE Putative uncharacterized protein 292 4e-77 Q9I670.1 Q9I670_PSEAE Probable transcriptional regulator 291 6e-77 >B9Z2C0.1 B9Z2C0_9NEIS Transcriptional regulator, LysR family Length = 302 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 144/295 (48%), Positives = 202/295 (68%) Query: 1 MRRKIPSITALMAFEAAARYQSFSRAADALSLTEGAISRQIAGLEEFLDLLLFHRVKKRV 60 MRRKIPSI AL AFEAAAR+QSF+RAA+ L+LT+ A+ +QIA LEE L + LF+R+K+RV Sbjct: 1 MRRKIPSIEALQAFEAAARHQSFTRAAEELALTQSAVCKQIATLEEMLGIALFNRIKRRV 60 Query: 61 QLTDIGKAYFAHVREDLNRLERNTLSAMAYQDGQQILELAVIPTFATKWLIPRLSEFSRL 120 L++ G+ Y VRE L+RLER+TLS MA+Q ++ELA IPTFAT+WLIPRL F Sbjct: 61 SLSEAGQVYAREVREHLDRLERSTLSIMAHQGSGGVIELAAIPTFATRWLIPRLPGFYAE 120 Query: 121 HPEIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQELLFEEELVPVCSPQLLGGKTA 180 HP I +N++ R+ F+F D+VFDA++H+ W G + LF EE++PVCSPQLL Sbjct: 121 HPNITINITTRSDTFIFADTVFDASIHFGTGVWPGAHADHLFGEEMIPVCSPQLLARHPC 180 Query: 181 LSIDELAAYPLLQKNTREDVWRHWFDMQGFQGRNPVGGPRHDLFSMIIQAACYGRGIALV 240 +L LL + R D W WF G N + GPR++LFSM+++AA G+ALV Sbjct: 181 PQPQDLVKLKLLHLSARHDAWHKWFAAAGASDLNAMVGPRYELFSMLVEAARAQMGVALV 240 Query: 241 PRLYVEDELRSGALLIPLDRPIRGLKKYCVVYPEHEEASPTLKLFIAWLMQAARE 295 PR V++E+RSG+L+ P D P++ Y +VYPE ++ + L+ F++WL++ A + Sbjct: 241 PRFLVQEEIRSGSLVTPFDIPMQSEMGYFLVYPESKQEAKVLQAFVSWLLEQAEQ 295 >Q02TW5.1 Q02TW5_PSEAB Putative transcriptional regulator, LysR family Length = 302 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 142/295 (48%), Positives = 198/295 (67%), Gaps = 1/295 (0%) Query: 1 MRRKIPSITALMAFEAAARYQSFSRAADALSLTEGAISRQIAGLEEFLDLLLFHRVKKRV 60 MRRKIPS AL++FE+AAR++SF++AA+ LSLT+ AI RQIA LEEFL + LF R ++ V Sbjct: 1 MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGV 60 Query: 61 QLTDIGKAYFAHVREDLNRLERNTLSAMAYQDGQQILELAVIPTFATKWLIPRLSEFSRL 120 +LT+ G +Y V L+ +ER+TL+ M +Q G I ELAV+PTF T+WL+PRL F RL Sbjct: 61 KLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAI-ELAVVPTFGTQWLLPRLKRFQRL 119 Query: 121 HPEIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQELLFEEELVPVCSPQLLGGKTA 180 HPE+ VNL+ R PFLF D+ FDAA+++ W+G L E VPVCSP+LLGG+ Sbjct: 120 HPEVTVNLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRT 179 Query: 181 LSIDELAAYPLLQKNTREDVWRHWFDMQGFQGRNPVGGPRHDLFSMIIQAACYGRGIALV 240 LS +++A PL+Q++TR WR WF QG + + GPR++LFSM+ QAA +G G+AL+ Sbjct: 180 LSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALI 239 Query: 241 PRLYVEDELRSGALLIPLDRPIRGLKKYCVVYPEHEEASPTLKLFIAWLMQAARE 295 P ++DEL G L++P+ Y ++ PE S L F WL++ AR+ Sbjct: 240 PPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQ 294 >B7V433.1 B7V433_PSEA8 Probable transcriptional regulator Length = 302 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 142/295 (48%), Positives = 198/295 (67%), Gaps = 1/295 (0%) Query: 1 MRRKIPSITALMAFEAAARYQSFSRAADALSLTEGAISRQIAGLEEFLDLLLFHRVKKRV 60 MRRKIPS AL++FE+AAR++SF++AA+ LSLT+ AI RQIA LEEFL + LF R ++ V Sbjct: 1 MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGV 60 Query: 61 QLTDIGKAYFAHVREDLNRLERNTLSAMAYQDGQQILELAVIPTFATKWLIPRLSEFSRL 120 +LT+ G +Y V L+ +ER+TL+ M +Q G I ELAV+PTF T+WL+PRL F RL Sbjct: 61 KLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAI-ELAVVPTFGTQWLLPRLKRFQRL 119 Query: 121 HPEIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQELLFEEELVPVCSPQLLGGKTA 180 HPE+ VNL+ R PFLF D+ FDAA+++ W+G L E VPVCSP+LLGG+ Sbjct: 120 HPEVTVNLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRT 179 Query: 181 LSIDELAAYPLLQKNTREDVWRHWFDMQGFQGRNPVGGPRHDLFSMIIQAACYGRGIALV 240 LS +++A PL+Q++TR WR WF QG + + GPR++LFSM+ QAA +G G+AL+ Sbjct: 180 LSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALI 239 Query: 241 PRLYVEDELRSGALLIPLDRPIRGLKKYCVVYPEHEEASPTLKLFIAWLMQAARE 295 P ++DEL G L++P+ Y ++ PE S L F WL++ AR+ Sbjct: 240 PPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQ 294 >A3KZY2.1 A3KZY2_PSEAE Putative uncharacterized protein Length = 302 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 142/295 (48%), Positives = 198/295 (67%), Gaps = 1/295 (0%) Query: 1 MRRKIPSITALMAFEAAARYQSFSRAADALSLTEGAISRQIAGLEEFLDLLLFHRVKKRV 60 MRRKIPS AL++FE+AAR++SF++AA+ LSLT+ AI RQIA LEEFL + LF R ++ V Sbjct: 1 MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGV 60 Query: 61 QLTDIGKAYFAHVREDLNRLERNTLSAMAYQDGQQILELAVIPTFATKWLIPRLSEFSRL 120 +LT+ G +Y V L+ +ER+TL+ M +Q G I ELAV+PTF T+WL+PRL F RL Sbjct: 61 KLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAI-ELAVVPTFGTQWLLPRLKRFQRL 119 Query: 121 HPEIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQELLFEEELVPVCSPQLLGGKTA 180 HPE+ VNL+ R PFLF D+ FDAA+++ W+G L E VPVCSP+LLGG+ Sbjct: 120 HPEVTVNLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRT 179 Query: 181 LSIDELAAYPLLQKNTREDVWRHWFDMQGFQGRNPVGGPRHDLFSMIIQAACYGRGIALV 240 LS +++A PL+Q++TR WR WF QG + + GPR++LFSM+ QAA +G G+AL+ Sbjct: 180 LSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALI 239 Query: 241 PRLYVEDELRSGALLIPLDRPIRGLKKYCVVYPEHEEASPTLKLFIAWLMQAARE 295 P ++DEL G L++P+ Y ++ PE S L F WL++ AR+ Sbjct: 240 PPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQ 294 >Q9I670.1 Q9I670_PSEAE Probable transcriptional regulator Length = 302 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 141/295 (47%), Positives = 198/295 (67%), Gaps = 1/295 (0%) Query: 1 MRRKIPSITALMAFEAAARYQSFSRAADALSLTEGAISRQIAGLEEFLDLLLFHRVKKRV 60 MRRKIPS AL++FE+AAR++SF++AA+ LSLT+ AI RQIA LEEFL + LF R ++ V Sbjct: 1 MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGV 60 Query: 61 QLTDIGKAYFAHVREDLNRLERNTLSAMAYQDGQQILELAVIPTFATKWLIPRLSEFSRL 120 +LT+ G +Y V L+ +ER+TL+ M +Q G I ELAV+PTF T+WL+PRL F RL Sbjct: 61 KLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAI-ELAVVPTFGTQWLLPRLKRFQRL 119 Query: 121 HPEIVVNLSERALPFLFGDSVFDAAVHYEHPAWAGNAQELLFEEELVPVCSPQLLGGKTA 180 HPE+ +NL+ R PFLF D+ FDAA+++ W+G L E VPVCSP+LLGG+ Sbjct: 120 HPEVTINLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRT 179 Query: 181 LSIDELAAYPLLQKNTREDVWRHWFDMQGFQGRNPVGGPRHDLFSMIIQAACYGRGIALV 240 LS +++A PL+Q++TR WR WF QG + + GPR++LFSM+ QAA +G G+AL+ Sbjct: 180 LSAEQVAGLPLMQQSTRPYAWRQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALI 239 Query: 241 PRLYVEDELRSGALLIPLDRPIRGLKKYCVVYPEHEEASPTLKLFIAWLMQAARE 295 P ++DEL G L++P+ Y ++ PE S L F WL++ AR+ Sbjct: 240 PPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQ 294