BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0073.p         (158 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q21WA8.1 Q21WA8_RHOFD Putative uncharacterized protein                 99   2e-19
B0SWI1.1 B0SWI1_CAUSK 2'-5' RNA ligase                                 96   1e-18
Q9A7S9.1 Q9A7S9_CAUCR Putative uncharacterized protein                 93   2e-17
B8GVK8.1 B8GVK8_CAUCN 2'-5' RNA ligase EC=6.5.1.-                      93   2e-17
E6V5X9.1 E6V5X9_VARPD Phosphoesterase HXTX                             92   2e-17

>Q21WA8.1 Q21WA8_RHOFD Putative uncharacterized protein
          Length = 205

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 14  HGVTGKRVGPERLHITLELVGHDSD--ERVVEAACRAADAVRFAAIDARFDAAMTFSAPS 71
           HG+ GK +   RLH+TL  +G  +     +V  A  A DAV   A D  FD AM+F + S
Sbjct: 61  HGLLGKPLLAHRLHVTLHDLGGYAQLPPDIVRTAREAGDAVAAPAFDVVFDHAMSFPS-S 119

Query: 72  GPFVLLGGKGLDGVRELRTALGCAMAEHGFTPQRSYEPHMTLGYDPRHRVERIAIDPIGF 131
           G +VL  G G   +   R +LG AM   G   +RS+ PHMT+ YD RH +   AI+PI +
Sbjct: 120 GTYVLCSGAGTAQLAAFRQSLGLAMDHAGLPVKRSFTPHMTVLYD-RHPIAEHAIEPIIW 178

Query: 132 RIAEFALVKSHIGLSRHEVLRVWPL 156
              EF L+KSH+G   HEVL  W L
Sbjct: 179 TAKEFVLIKSHVGQGVHEVLGRWSL 203


>B0SWI1.1 B0SWI1_CAUSK 2'-5' RNA ligase
          Length = 189

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 6/155 (3%)

Query: 7   AEKLLALHGVTGKRVGPERLHITLELVGHDSDER--VVEAACRAADAVRFAAIDARFDAA 64
           A +L A H ++G+ + PER H+TL  +G  +  R  +V  A  AA+ +   A D  FD A
Sbjct: 35  AAQLRAAHALSGRPLAPERFHVTLHHLGDHAGVRRDIVAMASEAAEMIATPAFDVTFDRA 94

Query: 65  MTF-SAPSGPFVLLGGKGLDGVRELRTALGCAMAEHGF--TPQRSYEPHMTLGYDPRHRV 121
            +F +  + P VL GG+GLD ++  +  LG AMA  G      +S+ PH+T+ YDPR   
Sbjct: 95  ASFHNGGNNPHVLQGGEGLDALKAFQRDLGLAMARAGLGRLADKSFTPHVTMLYDPRLVA 154

Query: 122 ERIAIDPIGFRIAEFALVKSHIGLSRHEVLRVWPL 156
           E+ A+ P+ +R+A F LV S +G + H  L+ W L
Sbjct: 155 EQ-AVAPVTWRVAGFTLVHSLLGRTEHVPLQRWAL 188


>Q9A7S9.1 Q9A7S9_CAUCR Putative uncharacterized protein
          Length = 192

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 7   AEKLLALHGVTGKRVGPERLHITLELVGHDS--DERVVEAACRAADAVRFAAIDARFDAA 64
           A +L    G+ G  +   RLHITL  +G  +     +V     A DAV   A +  FD A
Sbjct: 39  AARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGRFAGDAVEAGAFEVVFDRA 98

Query: 65  MTFSAPSG--PFVLLGGKGLDGVRELRTALGCAMAEHGFTPQRSYEPHMTLGYDPRHRVE 122
            +F+  SG  PF L GG+G+  +   + ALG  MA     P RS+ PH+TL YD R  + 
Sbjct: 99  ASFANRSGNNPFTLQGGEGIQPLIAFQKALGEKMAGAALRPDRSFTPHITLLYD-RQVMP 157

Query: 123 RIAIDPIGFRIAEFALVKSHIGLSRHEVLRVWPLG 157
             AI PI + ++ FALV+S +G ++H VLR W LG
Sbjct: 158 EQAITPISWTVSRFALVQSKLGRTQHIVLREWDLG 192


>B8GVK8.1 B8GVK8_CAUCN 2'-5' RNA ligase EC=6.5.1.-
          Length = 192

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 7   AEKLLALHGVTGKRVGPERLHITLELVGHDS--DERVVEAACRAADAVRFAAIDARFDAA 64
           A +L    G+ G  +   RLHITL  +G  +     +V     A DAV   A +  FD A
Sbjct: 39  AARLKRASGLAGPLLQTGRLHITLHHLGDYAGLPNDIVSKGRFAGDAVEAGAFEVVFDRA 98

Query: 65  MTFSAPSG--PFVLLGGKGLDGVRELRTALGCAMAEHGFTPQRSYEPHMTLGYDPRHRVE 122
            +F+  SG  PF L GG+G+  +   + ALG  MA     P RS+ PH+TL YD R  + 
Sbjct: 99  ASFANRSGNNPFTLQGGEGIQPLIAFQKALGEKMAGAALRPDRSFTPHITLLYD-RQVMP 157

Query: 123 RIAIDPIGFRIAEFALVKSHIGLSRHEVLRVWPLG 157
             AI PI + ++ FALV+S +G ++H VLR W LG
Sbjct: 158 EQAITPISWTVSRFALVQSKLGRTQHIVLREWDLG 192


>E6V5X9.1 E6V5X9_VARPD Phosphoesterase HXTX
          Length = 201

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 89/155 (57%), Gaps = 4/155 (2%)

Query: 3   LDAFAEKLLALHGVTGKRVGPERLHITL-ELVGHDSDE-RVVEAACRAADAVRFAAIDAR 60
           L A   +L   H + G      RLH+TL +L G+D+   + V+AA  AA AV   + D  
Sbjct: 48  LAALGAQLNDRHALKGTLSEAHRLHVTLHDLGGYDTVPCKKVQAALEAAAAVAPPSFDVV 107

Query: 61  FDAAMTFSAPSGPFVLLGGKGLDGVRELRTALGCAMAEHGFTPQRSYEPHMTLGYDPRHR 120
           FD AMT+ A S  FVL G +G   + + R  LG A+A+ G  P RS+ PHMTL Y  R +
Sbjct: 108 FDHAMTY-ANSKAFVLCGEEGTAALADFRQRLGEALADAGLKPDRSFTPHMTLAYT-RRK 165

Query: 121 VERIAIDPIGFRIAEFALVKSHIGLSRHEVLRVWP 155
           VE+ AI+P+ +    FAL+ SH+G   HEVL  WP
Sbjct: 166 VEKHAIEPVRWTAGSFALIDSHVGEGLHEVLGRWP 200