BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0022.p         (97 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T1C9.1 A6T1C9_JANMA SurF1 family protein                             88   3e-16
B4WEE5.1 B4WEE5_9CAUL SURF1 family                                     82   3e-14
A4G8I3.1 A4G8I3_HERAR Putative uncharacterized protein                 81   5e-14
D4XIF6.1 D4XIF6_9BURK SurF1 family protein                             81   5e-14
D8IWD9.1 D8IWD9_HERSS Surfeit 1 protein                                80   8e-14

>A6T1C9.1 A6T1C9_JANMA SurF1 family protein
          Length = 284

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 1   VPAIAVSRKLDHVAPYFIDAEDMHSA-ASEQQRAANGQAVGGLTVISFPNNHLVYALTWF 59
           V AIA   KL  VAPYFIDAE   +  A      A  + VGGLTVISF NNHLVYALTW+
Sbjct: 182 VQAIATQHKLAPVAPYFIDAEAGKAVVAKPATDPALAEPVGGLTVISFHNNHLVYALTWY 241

Query: 60  GLALMTGAAFFWIGRDEKR-RRLSAGQKNKDGKQG 93
            LALM   A FW+ R+E++ R  SA + ++D + G
Sbjct: 242 ALALMVAGAAFWLRREERKVRATSADRIDRDTEDG 276


>B4WEE5.1 B4WEE5_9CAUL SURF1 family
          Length = 226

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 8/80 (10%)

Query: 1   VPAIAVSRKLDHVAPYFIDAEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTWFG 60
           V AIA +++L +VAPYFIDA+   +         +G   GGLT++ FPN+HLVYALTWFG
Sbjct: 152 VAAIAAAKELSNVAPYFIDADATPNP--------DGWPRGGLTIVKFPNSHLVYALTWFG 203

Query: 61  LALMTGAAFFWIGRDEKRRR 80
           +ALMT   F+ + R+ +RRR
Sbjct: 204 MALMTLVGFWLVAREVRRRR 223


>A4G8I3.1 A4G8I3_HERAR Putative uncharacterized protein
          Length = 265

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 3/80 (3%)

Query: 1   VPAIAVSRKLDHVAPYFID--AEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTW 58
           V AIA ++ L  VAPYFID  A      AS   RAA    +GGLTVISF NNHLVYALTW
Sbjct: 184 VAAIAAAQHLSSVAPYFIDQDARPQSREASSVDRAAV-PPIGGLTVISFNNNHLVYALTW 242

Query: 59  FGLALMTGAAFFWIGRDEKR 78
           + LALM  AA +W+ R+E+R
Sbjct: 243 YVLALMVIAACWWVLREERR 262


>D4XIF6.1 D4XIF6_9BURK SurF1 family protein
          Length = 259

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 4/83 (4%)

Query: 1   VPAIAVSRKLDHVAPYFIDAEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTWFG 60
           +PAIA +R L  VAPYFIDA+    A+S   R      VGGLTV++FPNNHLVYA+TW+ 
Sbjct: 181 LPAIATARGLSDVAPYFIDAD----ASSSPSRDPAQDPVGGLTVLTFPNNHLVYAITWYA 236

Query: 61  LALMTGAAFFWIGRDEKRRRLSA 83
           LALM         R+++R R  A
Sbjct: 237 LALMIIVGVVIFVREDRRARAKA 259


>D8IWD9.1 D8IWD9_HERSS Surfeit 1 protein
          Length = 285

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%)

Query: 1   VPAIAVSRKLDHVAPYFIDAEDMHSAASEQQRAANGQAVGGLTVISFPNNHLVYALTWFG 60
           V AIA ++ L  VAPYF+DA+   + A+        + VGGLTVI+F N+HL+YALTW+ 
Sbjct: 192 VQAIAQAKGLTSVAPYFVDADKASAEANAAVAPDAQKPVGGLTVIAFHNSHLIYALTWYA 251

Query: 61  LALMTGAAFFWIGRDEKRRR 80
           LALM+  A +W+ RDE+R R
Sbjct: 252 LALMSLGAGYWLIRDERRWR 271