BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0240.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all2288 [M] COG0463 Glycosyltransferases involved in cell wall b...    64   3e-10
BH3713 [M] COG0463 Glycosyltransferases involved in cell wall bi...    63   4e-10

>all2288 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis
           Nos Nostoc sp. PCC 7120
          Length = 343

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 13  MKFSLVLATLGRTDEVARFLVSLHAQDYRNFELIVVDQNDDDRLVPLMAMYGEKMQIRHL 72
           M  S+++        VA  L S+ AQ YR+ E+I+VD    D+ + +   + ++ +IR +
Sbjct: 1   MNLSVIIPVYNSESSVAETLRSVLAQTYRDLEIIIVDDGSTDKSIDICKQFQDE-RIRII 59

Query: 73  RSAARGASRARNTGLSLAKGDVIAFPD-DDCWYPDGL 108
               RG + ARNTG+  A+G+ +AF D DD W P+ L
Sbjct: 60  HQQNRGLAGARNTGIRQARGEYLAFVDSDDLWLPEKL 96


>BH3713 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis
           Bha Bacillus halodurans
          Length = 303

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 13  MKFSLVLATLGRTDEVARFLVSLHAQDYRNFELIVVDQNDDDRLVPLMAMYGEKMQIRHL 72
           MK S+++ T  R   + R L S   Q Y+N E+IVV     D    +M  Y    ++  +
Sbjct: 1   MKVSIIIPTHNRAKLLKRALESTLNQTYKNIEVIVVSDGSTDNTDIVMDEYKRDSRVNFI 60

Query: 73  RS-AARGASRARNTGLSLAKGDVIAF-PDDDCWYPDGLLTQV 112
               A+G + ARNTG+  AKG+ IAF  DDD W PD L  Q+
Sbjct: 61  SYHPAKGGNYARNTGIKNAKGEFIAFLDDDDEWMPDKLELQI 102