BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0238.p (498 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF2362 [R] COG2244 Membrane protein involved in the export of O-... 132 2e-30 SMb21050 [R] COG2244 Membrane protein involved in the export of ... 114 6e-25 BS_tuaB [R] COG2244 Membrane protein involved in the export of O... 105 2e-22 Cgl0350 [R] COG2244 Membrane protein involved in the export of O... 100 9e-21 AGl2565 [R] COG2244 Membrane protein involved in the export of O... 99 2e-20 >XF2362 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Xfa Xylella fastidiosa 9a5c Length = 510 Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/387 (27%), Positives = 196/387 (50%), Gaps = 2/387 (0%) Query: 19 GSIWSIVDNLAQQVLSFLAFAVLARFLAPDAFGLLTVAHLFILFTRLVVFDAIAMPIVRA 78 G++ +++ A+ V+ F +LAR L P +GL+ + + ++ ++ ++A Sbjct: 23 GAVVTMLGQGARVVIQFSIIVLLARLLNPHDYGLMAMVTAIVGVADILRDFGLSSAAIQA 82 Query: 79 LAPNDRLYSWVFTCCSIAGLLLTMAMFFSAGLISSLFRTQDLQVVLQGMSISIFFFGLVR 138 + +F S+ GL L++ +F +A LI+ +R L + Q ++I+ G+ Sbjct: 83 KQITNAQRDNLFWINSVIGLALSLVVFVAAQLIADFYREPALVTITQVLAINFLLNGMAT 142 Query: 139 AYEARLVRNMMFRQLAIRSIASVMIGGVIGIAMAASGAGAISLVVQQVVASGLGLVLVVA 198 Y A L R M F QLA+ I + ++G ++G+++A G G +LV+QQVV + LV+ + Sbjct: 143 QYRANLSREMRFGQLALSDIGAQVLGLLVGVSVALVGWGVWALVLQQVVQAVANLVIAMV 202 Query: 199 QSRWLPTLAFDRAL-YKKYWDDIRQVGMSGLLNFANANGDSLLVGFLLGPYATGLYNLAK 257 +RWLP + R + + + ++ LL++AN + +++G+ LGP GLYN A Sbjct: 203 CARWLPG-GYRRGVPMGSFLSFGWNLMVAQLLSYANRSVGQVIIGYRLGPNVLGLYNRAF 261 Query: 258 RVTSAVYLVITSSMQRVALPMFSDALEDRIELQNRYLKIIGITLFFILPLFCFQGALATP 317 ++ + + VALP+ S +DR + L+ + L I+ LF F A ATP Sbjct: 262 QLLMMPLNQVIAPASSVALPVLSQLQDDRARFDSFLLRGQTMMLHVIVALFAFSCAQATP 321 Query: 318 LVQIVFGAKWLPAAPVIGVLALLYMLSSIVQLNDYLFFSLGKNRLPVWLSIAQLMLAITS 377 L+ +V G KW A + +L L M S + +LF + G R + SI + + Sbjct: 322 LIVLVLGEKWRSAVLLFQILTLAGMTQSASYASYWLFLARGLIRDHLLFSIVSHVFLVLC 381 Query: 378 AASVSRFGLVGMSMSFCGAYLVIFPIS 404 + +G+ G+++ + + +I+P+S Sbjct: 382 VCIGAYWGVFGVAIGYSISLALIWPLS 408 >SMb21050 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Sme Sinorhizobium meliloti Length = 517 Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 103/457 (22%), Positives = 203/457 (44%), Gaps = 3/457 (0%) Query: 10 TDMNGNLASGSIWSIVDNLAQQVLSFLAFAVLARFLAPDAFGLLTVAHLFILFTRLVVFD 69 T + + S + W+ V+ +QV F F +LAR L P+ FGL T+A + VV Sbjct: 38 TSLGKKVVSSAAWAAVETWGRQVAMFAVFVILARHLGPEEFGLATLAMIAPTILATVVTR 97 Query: 70 AIAMPIVRALAPNDRLYSWVFTCCSIAGLLLTMAMFFSAGLISSLFRTQDLQVVLQGMSI 129 I +V+ F G L+ ++ AG+++ F L+ +++ I Sbjct: 98 GIPDALVQRAEIEPIHLDSAFWLLVATGATLSALIWAFAGVVAEAFGEPLLEDLVRWTGI 157 Query: 130 SIFFFGLVRAYEARLVRNMMFRQLAIRSIASVMIGGVIGIAMAASGAGAISLVVQQVVAS 189 + L A L R + FR +R++ M+GG +G+ MA +G G SLV+ QV + Sbjct: 158 IVVVQSLAAVPTAVLKRELNFRLFTLRTLTGTMVGGTVGLTMAIAGYGMWSLVLMQVAKA 217 Query: 190 GLGLVLVVAQSRWLPTLAFDRALYKKYWDDIRQVGMSGLLNFANANGDSLLVGFLLGPYA 249 + +++ S W P +A+ A ++ + V + L F N +++G LGP A Sbjct: 218 IVETTVILLGSSWRPRMAYSYARCRELFGFAGPVIVQTLWTFVNEEIPKVILGLFLGPVA 277 Query: 250 TGLYNLAKRVTSAVYLVITSSMQRVALPMFSDALEDRIELQNRYLKIIGITLFFILPLFC 309 G+Y +A+R + + + + +P + + ++ + + + + P F Sbjct: 278 VGVYAIARRPLDLLGEFLLGPLAAITMPAVARVQREPDKIDHFFNTSVRMAAIAGFPAFV 337 Query: 310 FQGALATPLVQIVFGAKWLPAAPVIGVLALLYMLSSIVQLNDYLFFSLGKNRLPVWLSIA 369 A+A V +VFG +W A + +L +L + +I L Y +LG ++L + L++ Sbjct: 338 GFAAIAPVAVPLVFGPQWASAVVAVQILMILGLQRTIDSLCAYTILALGHSKLVLKLNMT 397 Query: 370 QLMLAITSAASVSRFGLVGMSMSFCGAYLVIFPISQWLLHRALGLNSRMVWFALAPPLVA 429 + ++ + ++ L + + L++ P+ + + ++ A+ P L Sbjct: 398 YTLFSLVLLTAAAQISLEAVIAALVACNLLLLPVFLFYVQHTAHIDVSKP-LAIFPRLAG 456 Query: 430 GVVLLLGL-EAYLALIPRHFT-SLTLAGGIVLVCLVY 464 L+ + A+L P ++T+A GI + +Y Sbjct: 457 AAALMFAIVSAWLLAAPDDLPQAVTVAAGIAIGAPIY 493 >BS_tuaB [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Bsu Bacillus subtilis Length = 483 Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 99/443 (22%), Positives = 213/443 (48%), Gaps = 6/443 (1%) Query: 11 DMNGNLASGSIWSIVDNLAQQVLSFLAFAVLARFLAPDAFGLLTVAHLFILFTRLVVFDA 70 + + SG+ W+ + + ++ + FA+L + FGL+ + +F ++V+ Sbjct: 3 SITKQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMG 62 Query: 71 IAMPIVRALAPNDRLYSWVFTCCSIAGLLLTMAMFFSAGLISSLFRTQDLQVVLQGMSIS 130 +++ +R S ++ + G+LL + ++ S+ +I+ ++ ++L +++ ++I Sbjct: 63 FGAALIQRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIM 122 Query: 131 IFFFGLVRAYEARLVRNMMFRQLA-IRSIASVMIGGVIGIAMAASGAGAISLVVQQVVAS 189 + + Y+ L + + F L+ I ++V+ G + IA+ A ++ Q ++ S Sbjct: 123 FLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVISQVLLQS 182 Query: 190 GLGLVL-VVAQSRWLPTLAFDRALYKKYWDDIRQVGMSGLLNFANANGDSLLVGFLLGPY 248 G++ V + +W P FD K ++ S L+N AN D +L+G +G Sbjct: 183 SKGILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAE 242 Query: 249 ATGLYNLAKRVTSAVYLVITSSMQRVALPMFSDALEDRIELQNRYLKIIGITLFFILPLF 308 A G+YNLA ++ + L I + RVA P+F+ + ++ +L + + PL Sbjct: 243 ALGIYNLAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLL 302 Query: 309 CFQGALATPLVQIVFGAKWLPAAPVIGVLALLYMLSSIVQLNDYLFFSLGKNRLP-VWLS 367 +++ + VFG KWL A P++ VLA++ +L ++ N + + G+ L W S Sbjct: 303 IGLVSVSDAFITAVFGEKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDS 362 Query: 368 IAQLMLAITSAASVSRFGLVGMSMSFCGAYLVIFPISQWLLHRALGLNSRMVWFALAPPL 427 L+ ++ A+V L+ ++ + +V F I +WLL + LN + ++ P Sbjct: 363 GVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLIGRWLLAYVIKLNLSAYFQSIMKPF 422 Query: 428 VAGVVLLLGLEAY-LALIPRHFT 449 + + +G+ A+ ++L HF+ Sbjct: 423 L--ITAAMGIIAFGVSLSTEHFS 443 >Cgl0350 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Cgl Corynebacterium glutamicum Length = 497 Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 111/440 (25%), Positives = 212/440 (48%), Gaps = 24/440 (5%) Query: 1 MAKMSKQA-QTDMNGNL----ASGSIWSIVDNLAQQVLSFLAFAVLARFLAPDAFGL--- 52 MA +A + +G+L A GS ++V + + ++ L+ +LAR + P FGL Sbjct: 1 MANTRDEATEVPEDGSLRKGAARGSAITLVGQITRILIQLLSVILLARLIPPADFGLYAM 60 Query: 53 -LTVAHLFILFTRLVVFDAIAMPIVRALAPNDRLYSWVFTCCSIAGLLLTMAMFFSAGLI 111 L V+ + +F L +M +R+ + +S +F + AG LL + +F A + Sbjct: 61 VLAVSGVAQIFLDL----GFSMAALRSRDLTKQQHSNLFWINTSAGFLLFIIIFSLAIPL 116 Query: 112 SSLFRTQDLQVVLQGMSISIFFFGLVRAYEARLVRNMMFRQLAIRSIASVMIGGVIGIAM 171 ++ + L V Q +SI G+ + L R++ F L++ + + ++ V+ + M Sbjct: 117 ATFYGDDRLIRVTQWISIVYLLGGITAQFRVHLNRHLRFGALSLADVLAPLVALVVAVIM 176 Query: 172 AASGAGAISLVVQQVVASGLGLVLVVAQSRWLPTLAFDRALYKKYWDDIRQVGMSGLLNF 231 A G G +LVVQ ++ + LVLVV +RW+P+ K +G + L++ Sbjct: 177 AMKGYGVQALVVQTILNYLVMLVLVVVMARWVPSFPRKTPGMKPLLTFGMGLGATRFLSY 236 Query: 232 ANANGDSLLVGFLLGPYATGLYNLAKRVTSAVYLVITSSMQRVALPMFSDALED--RIEL 289 N DS+++G ++GP G Y+ A R+ A + I+ RVA+P ++D + Sbjct: 237 LTQNIDSIIIGRVMGPVQLGFYDRAFRLAVAPVVQISFPFTRVAIPFLVRVMDDGKKYVA 296 Query: 290 QNRYLKIIGI--TLFFILPLFCFQGALATPLVQIVFGAKWLPAAPVIGVLALLYMLSSIV 347 R +++GI T F+L G +ATP+V ++FG W+ A ++ +L + + ++ Sbjct: 297 ALREAQMVGIYGTASFLLVF----GGMATPIVTLIFGPDWVEAGLLMTILCIGAIFRTLQ 352 Query: 348 QLNDYLFFSLGKNRLPVWLSIAQLMLAITSAASVSRFGLVGMSMSFCGAYLVIFPISQWL 407 Q+ ++F S G + + L++ + + +R+G VG++ + Y + + +S Sbjct: 353 QVATWVFMSKGLSGALLKLNLVMQPVIVLLIIGGARWGTVGVAWAGTLGYFLFWLVSIAW 412 Query: 408 LHRALGLNSRMVWFALAPPL 427 A LN +W + PL Sbjct: 413 ASYATNLN---LWSLVTNPL 429 >AGl2565 [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 493 Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/326 (27%), Positives = 155/326 (47%), Gaps = 14/326 (4%) Query: 9 QTDMNGNLASGSIWSIVDNLAQQVLSFLAFAVLARFLAPDAFGLLTVAHLFILFTRLVVF 68 Q + +G WSIV N ++ + + F VLARFL+P +G++ A L ++ +++ Sbjct: 5 QHSIGSAALTGVFWSIVQNWGGKLFTSILFIVLARFLSPTDYGMVATAGLVLMLIQMISE 64 Query: 69 DAIAMPIV--RALAPNDRLYSWVFTCCSIAGLLLTMAMFFSAGLISSLFRTQDLQVVLQG 126 IV R L P+D + + ++A LL FS+ L F + L ++ Sbjct: 65 FGFGDAIVQKRDLEPSDINLPF-YASVTVATLLAITVCVFSSEL-ERWFEVEGLAPIIVA 122 Query: 127 MSISIFFFGLVRAYEARLVRNMMFRQLAIRSIASVMIGGVIGIAMAASGAGAISLVVQQV 186 + I + E R + F+ LAIR+ S ++GG + IA A G G SLVVQ Sbjct: 123 ICILLPLNTASLFQEVNYRRALAFKPLAIRTFISNIVGGGVAIAFAIMGLGVWSLVVQTY 182 Query: 187 VASGLGLVLVVAQSRWLPTLAFD-RALYKKYWDDIRQVGMSGLLNFANANGDSLLVGFL- 244 VA+ + L+ + + WLP+ + R+ + + + G S L + + L+ F+ Sbjct: 183 VATIVTLIWLWRKPHWLPSTTLNLRSFIQLF-----RFGSSALSLRSVEFASTRLIDFII 237 Query: 245 LGPY---ATGLYNLAKRVTSAVYLVITSSMQRVALPMFSDALEDRIELQNRYLKIIGITL 301 LG Y A GLY + R+ + ++ S++ V+L + S +R + Y ++IGI+ Sbjct: 238 LGRYGVAAFGLYTVGSRLYQILMQLLQSALYDVSLTVLSRISHERERMAELYKQLIGISA 297 Query: 302 FFILPLFCFQGALATPLVQIVFGAKW 327 P F ALA + +++FG W Sbjct: 298 IVSTPAFVLFAALAPEICRVLFGLAW 323