BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0235.p         (219 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC1785 [MU] COG1538 Outer membrane protein Ccr Caulobacter vibri...   112   8e-25
RSc3208 [MU] COG1538 Outer membrane protein Rso Ralstonia solana...   109   4e-24

>CC1785 [MU] COG1538 Outer membrane protein Ccr Caulobacter vibrioides
          Length = 478

 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 81/114 (71%)

Query: 1   LAEYYPKLSLSALLGFESLGAAGLVSADSFQPQAALGLRWRLFDFGRIDAEVARAKGVNR 60
           L++Y+PK+SLS L+G  +  +A L    + Q Q  LGLRWRLFDFGR+ AEV  A+G   
Sbjct: 318 LSQYFPKVSLSGLVGTATTSSATLFEGSATQAQGVLGLRWRLFDFGRVGAEVKAARGRKA 377

Query: 61  EALARYRQSILRATEDVENAIVTLVQLEKQSAELADEVAARQRARSAAQDAYXA 114
           EALA Y+Q++LRA+EDVENA V+LV+ E Q+  L+   A+  +AR+A+Q AY A
Sbjct: 378 EALAAYQQAVLRASEDVENAFVSLVKREVQARALSGGEASLAKARTASQVAYEA 431


>RSc3208 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum
          Length = 486

 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)

Query: 1   LAEYYPKLSLSALLG-FESLGAAGLVSADSFQPQAALGLRWRLFDFGRIDAEVARAKGVN 59
           +AEYYPK SLS LLG   S+GA  L  + + Q    LGLRWRLFDFGRI+A++ +AKG  
Sbjct: 317 IAEYYPKFSLSGLLGSATSVGAGSLFGSGASQFAGVLGLRWRLFDFGRINAQIDQAKGQE 376

Query: 60  REALARYRQSILRATEDVENAIVTLVQLEKQSAELADEVAARQRARSAAQDAY 112
            E LA YR ++LRATEDVE+A   LV+ E+Q+A L   V +  RAR+A+  AY
Sbjct: 377 AEMLAAYRLAVLRATEDVEDAFSALVKREEQAAVLTQGVDSLGRARNASFAAY 429