BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0207.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transpo... 217 2e-56 BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transpo... 216 3e-56 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 216 5e-56 SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 214 2e-55 RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 213 2e-55 >BMEII0065 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 238 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/233 (45%), Positives = 154/233 (66%), Gaps = 4/233 (1%) Query: 2 ILNVQDIHGYYGKSHVLQGVSLQVAAGEVVTLLGRNGAGKSTTLKSIVGVVQPRQGKVMF 61 IL+V+++H +YGKSH+LQGV+ + GE ++LLGRNG+G+STT+K+I+G+V P G+V+ Sbjct: 6 ILDVRELHAHYGKSHILQGVTFDLKKGEAISLLGRNGSGRSTTMKAIMGLVPPTSGEVLL 65 Query: 62 EGNNVAGLPAYKIAARGVCLVPEHRGIFKLLTVEENLTMAARKD----SAWGLEDVYKIF 117 G N+AG ++KI G+ VPE R F LTV+ENL M ++ + W +E ++ F Sbjct: 66 NGKNLAGERSFKICRAGIGFVPEERETFLNLTVDENLQMGIQRGAEGATRWTVEQMFDYF 125 Query: 118 PRLKERRKNGGGQLSGGEQQMLAIARALMTHPKVLMLDEPVEGLAPVIVDEIVAQIKLIK 177 PRLKERR G LSGGEQQML + R L+ +P V+++DEP EGLAP IV + IK I Sbjct: 126 PRLKERRNTRAGSLSGGEQQMLTMCRTLLGNPLVMLIDEPTEGLAPKIVAVVGEMIKDIN 185 Query: 178 ATGMSIILVEQNLEVCTQLADRHYIVEQGRIAYTATNAEFLADDSAKDRYLGV 230 G+S++LVEQ L + +++ R ++ GRI + T E AD+ + +L V Sbjct: 186 RQGVSVVLVEQKLTIALKVSSRVCVMGHGRIVFEGTPDELTADEKLMEEWLAV 238 >BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 252 Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/234 (43%), Positives = 159/234 (67%), Gaps = 5/234 (2%) Query: 2 ILNVQDIHGYYGKSHVLQGVSLQVAAGEVVTLLGRNGAGKSTTLKSIVGVVQPRQGKVMF 61 +L ++ + YG++ +LQ VSL+V GE+VT++G NGAGK+TTL++IVG +QPR GK+ F Sbjct: 19 MLTLEHVDAGYGRTTILQDVSLEVKEGEIVTIVGANGAGKTTTLRTIVGQIQPRAGKITF 78 Query: 62 EGNNVAGLPAYKIAARGVCLVPEHRGIFKLLTVEENLTM-----AARKDSAWGLEDVYKI 116 G ++ LPA+++ RG+ L+PE R +F +TV ENL M AAR +E+V ++ Sbjct: 79 LGEDITHLPAHEVVDRGIILIPEGRQLFPDMTVRENLQMGTYRRAARAAQESRMEEVLEL 138 Query: 117 FPRLKERRKNGGGQLSGGEQQMLAIARALMTHPKVLMLDEPVEGLAPVIVDEIVAQIKLI 176 FPR++ER LSGGEQQM+AIAR +M +P++LM DEP GLAP++V ++ ++ I Sbjct: 139 FPRVRERLDQTASSLSGGEQQMVAIARGMMANPRILMFDEPSLGLAPIVVSQVFDVVRKI 198 Query: 177 KATGMSIILVEQNLEVCTQLADRHYIVEQGRIAYTATNAEFLADDSAKDRYLGV 230 ATG ++++VEQN+ ++A+R Y++E GR+ ++ L +D + YLG+ Sbjct: 199 AATGTTVLIVEQNVFTTLKVANRGYVLENGRVVLADSSEALLNNDHVRRAYLGI 252 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 113/235 (48%), Positives = 156/235 (66%), Gaps = 5/235 (2%) Query: 1 MILNVQDIHGYYGKSHVLQGVSLQVAAGEVVTLLGRNGAGKSTTLKSIVGVVQPRQGKVM 60 ++L VQ +H YYG H ++G+ L+V G++VTL+G NGAGK+TTL +I G+V+ ++GK++ Sbjct: 4 IVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKII 63 Query: 61 FEGNNVAGLPAYKIAARGVCLVPEHRGIFKLLTVEENLTMAA--RKDS---AWGLEDVYK 115 F G ++ PA+ I G+ LVPE R IF LTV ENL M A RKD LE ++ Sbjct: 64 FNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFS 123 Query: 116 IFPRLKERRKNGGGQLSGGEQQMLAIARALMTHPKVLMLDEPVEGLAPVIVDEIVAQIKL 175 +FPRLKER K GG LSGGEQQMLAI RALM+ PK+LM+DEP GLAP++V E+ I+ Sbjct: 124 LFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQK 183 Query: 176 IKATGMSIILVEQNLEVCTQLADRHYIVEQGRIAYTATNAEFLADDSAKDRYLGV 230 I G +I+LVEQN ++A Y++E G+I +E L ++ + YLGV Sbjct: 184 INQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLGV 238 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/209 (48%), Positives = 151/209 (72%), Gaps = 1/209 (0%) Query: 2 ILNVQDIHGYYGKSHVLQGVSLQVAAGEVVTLLGRNGAGKSTTLKSIVGVVQPRQGKVMF 61 +L V ++ +YG+SHVL GV + V GE+VTLLGRNG GK+TTL++I+G+V+ R+G++ F Sbjct: 4 LLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEISF 63 Query: 62 EGNNVAGLPAYKIAARGVCLVPEHRGIFKLLTVEENLTMA-ARKDSAWGLEDVYKIFPRL 120 G ++ +P +++A RG+ VPE RGIF LTV ENL + A +++++++FP L Sbjct: 64 AGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLLPPAVAKGGMTIDEIFELFPNL 123 Query: 121 KERRKNGGGQLSGGEQQMLAIARALMTHPKVLMLDEPVEGLAPVIVDEIVAQIKLIKATG 180 ERR + G +LSGGEQQMLAIAR L T ++++LDEP EGLAPVIV I +K +K G Sbjct: 124 HERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKERG 183 Query: 181 MSIILVEQNLEVCTQLADRHYIVEQGRIA 209 M+++LVEQN +++ADR Y+++ GR+A Sbjct: 184 MTVLLVEQNFRFASKVADRFYLMDHGRVA 212 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 104/234 (44%), Positives = 153/234 (65%), Gaps = 6/234 (2%) Query: 2 ILNVQDIHGYYGKSHVLQGVSLQVAAGEVVTLLGRNGAGKSTTLKSIVGVVQPRQGKVMF 61 +L V+ +H YYGKSH+L GV L V GE+V LLGRNG G+ST KSI+G+V+ +G ++ Sbjct: 7 MLEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRC-EGHILL 65 Query: 62 EGNNVAGLPAYKIAARGVCLVPEHRGIFKLLTVEENLTMAARKDSA-----WGLEDVYKI 116 G +V GL +++A RG+ VPE+R IF LTV +NL + +++ W +D+Y++ Sbjct: 66 RGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNPRQPRPRWQFDDMYRL 125 Query: 117 FPRLKERRKNGGGQLSGGEQQMLAIARALMTHPKVLMLDEPVEGLAPVIVDEIVAQIKLI 176 FPRLKER G LSGGEQQML + R LM P +++DEP EGLAP+IV ++ +K + Sbjct: 126 FPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVAQVGEYLKTL 185 Query: 177 KATGMSIILVEQNLEVCTQLADRHYIVEQGRIAYTATNAEFLADDSAKDRYLGV 230 KA G+S++LVEQ L + ++ R Y++ G+I + T A+ AD + +L V Sbjct: 186 KARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEWLEV 239