BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0202.p         (220 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprot...   122   5e-28
PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein...   112   7e-25
HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein...   106   5e-23
STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotei...   102   1e-21
yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein E...    97   2e-20

>RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprotein Rso
           Ralstonia solanacearum
          Length = 199

 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 113/193 (58%)

Query: 10  TLSKLRRPLAAAAVCGMLAIGLQGCFGVLAGGLLAGTFAATDRRTLGAQTEDKSIVIKGE 69
           T ++L+R +  AA+ G+ A  L  CF + AG +  G   ATDRR    QT D+ + ++ E
Sbjct: 7   TSARLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAE 66

Query: 70  ANIPGVVPQGSHVNVTSFNRKVLLSGEVPDEASKAAAEREIKSLPGVEGVFNELAVSGSS 129
            ++       +HVNVT +NRKVLL+GE  DE  K    +  + L     V NE+ +   S
Sbjct: 67  NSLIARYSGLAHVNVTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFS 126

Query: 130 NFSSRSGDALVTSKVLASLVDAKDLYSSAFKVTTERGIVYIMGRVTEREGKRAADIAAGV 189
           +F +R+ D  +T+KV A+L   + L  ++ KVTTE   VY+MG VTE EG+ A ++A  V
Sbjct: 127 SFGARTNDTYLTTKVKAALAGTEGLPWNSIKVTTEAQAVYLMGVVTESEGEHATEVARTV 186

Query: 190 SGVQKVVTLYEYI 202
            GV KVV +++Y+
Sbjct: 187 GGVGKVVKVFDYV 199


>PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein Pae
           Pseudomonas aeruginosa
          Length = 192

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 3/154 (1%)

Query: 53  RTLGAQTEDKSIVIKGEANIPGVVP---QGSHVNVTSFNRKVLLSGEVPDEASKAAAERE 109
           RT+G++ +D  I  K   NI    P   + SH+ V S+N  VL++G+ P    K+ AE+ 
Sbjct: 39  RTIGSKIDDSLIETKAAVNIAKADPALDKDSHIVVVSYNGIVLIAGQTPRADLKSKAEQA 98

Query: 110 IKSLPGVEGVFNELAVSGSSNFSSRSGDALVTSKVLASLVDAKDLYSSAFKVTTERGIVY 169
            +++  V+ V NEL V+  S+  +R+ DA +T+K+   ++   ++ SS  KV TE GIVY
Sbjct: 99  ARTVQKVKNVHNELQVTSPSSLLARNNDAWITTKLKTQMLSDPNVPSSRIKVVTENGIVY 158

Query: 170 IMGRVTEREGKRAADIAAGVSGVQKVVTLYEYIS 203
           +MG V ++E  +A  +A GV GVQK+V L+EYI+
Sbjct: 159 MMGLVNQQEAAQAVRVAQGVDGVQKIVKLFEYIN 192


>HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein Hin
           Haemophilus influenzae
          Length = 193

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 104/188 (55%), Gaps = 2/188 (1%)

Query: 17  PLAAAAVCGMLAIGLQGCFGVLAGGLLAGTFAATDRRTLGAQTEDKSIVIKGEANI--PG 74
           PL   A+     I LQGC   + GG       ATD RT G Q +D+++  K E  +    
Sbjct: 5   PLKKLAILLGATIFLQGCVAAVIGGGAVAAKVATDPRTTGTQIDDETLEFKVENAVEKDA 64

Query: 75  VVPQGSHVNVTSFNRKVLLSGEVPDEASKAAAEREIKSLPGVEGVFNELAVSGSSNFSSR 134
            +     VN  S+N +VLL G+VP+   K  A    K + GV  V+NEL VS   +F+  
Sbjct: 65  QIKAEGRVNAVSYNGRVLLIGQVPNSDVKDTATALAKGVEGVNEVYNELTVSPKISFAQI 124

Query: 135 SGDALVTSKVLASLVDAKDLYSSAFKVTTERGIVYIMGRVTEREGKRAADIAAGVSGVQK 194
           S D+ +T++V + +     + ++  KV +E G V+++G VT+ +   AADIA+ +SGV+K
Sbjct: 125 SKDSWLTTQVKSKMFVDGRVKATDVKVISENGEVFLLGNVTQSQANAAADIASKISGVKK 184

Query: 195 VVTLYEYI 202
           V+ +++Y+
Sbjct: 185 VIKVFKYL 192


>STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotein Sty
           Salmonella typhimurium LT2
          Length = 191

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 28  AIGLQGCFGVLAGGLLAGTF-AATDRRTLGAQTEDKSIVIKGEANIPG--VVPQGSHVNV 84
           A+ LQGC      G  A    AATD R++G Q +D ++ ++  + +     + + + +NV
Sbjct: 13  ALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINV 72

Query: 85  TSFNRKVLLSGEVPDEASKAAAEREIKSLPGVEGVFNELAVSGSSNFSSRSGDALVTSKV 144
           T++  KVLL G+ P+    A A++    + G   V+NE+         + S D  +T+KV
Sbjct: 73  TAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKV 132

Query: 145 LASLVDAKDLYSSAFKVTTERGIVYIMGRVTEREGKRAADIAAGVSGVQKVVTLYEYI 202
            + L+ +  + SS  KVTTE G V+++G VTEREGK AADIA+ VSGV++V T + YI
Sbjct: 133 RSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGVKRVTTAFTYI 190


>yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein Eco
           Escherichia coli K12
          Length = 191

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 28  AIGLQGCFGVLAGGLLAGTF-AATDRRTLGAQTEDKSIVIKGEANIPG--VVPQGSHVNV 84
           A+ LQGC      G  A    AATD R++G Q +D ++ ++  + +     + + + +NV
Sbjct: 13  ALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINV 72

Query: 85  TSFNRKVLLSGEVPDEASKAAAEREIKSLPGVEGVFNELAVSGSSNFSSRSGDALVTSKV 144
           T++  KVLL G+ P+    A A++    + G   V+NE+           S D  +T+KV
Sbjct: 73  TAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKV 132

Query: 145 LASLVDAKDLYSSAFKVTTERGIVYIMGRVTEREGKRAADIAAGVSGVQKVVTLYEYI 202
            + L+ +  + SS  KVTTE G V++MG VTERE K AADIA+ VSGV++V T + +I
Sbjct: 133 RSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFI 190