BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0190.p (292 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0832 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum 277 2e-74 SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti 175 1e-43 AGpA685_2 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefac... 172 7e-43 CC1805 Non COG 150 3e-36 AGl1336 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefacie... 150 4e-36 >RSp0832 [G] COG3386 Gluconolactonase Rso Ralstonia solanacearum Length = 296 Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/285 (52%), Positives = 184/285 (64%), Gaps = 8/285 (2%) Query: 6 LNDQRYDVAESPFWHATQSAWYWVDIPRKLICR-QTADGDCQQWQLLEMVACIAPDDDGG 64 + R V ESP WH + A YW DIP + + R A G W L EM CIA DDG Sbjct: 8 IGTMRCGVGESPVWHPREQALYWTDIPGRTLWRWNPATGHADAWPLPEMAGCIAMLDDGW 67 Query: 65 LIAGMHTGIFSVRLQDDGHAQLS--KLAQPAGLQADQRFNDGRCDRQGRFWSGVMCLDMS 122 +A M TG+F + + G + +LA + D RFNDGRCDRQGRFWSG M LD + Sbjct: 68 ALA-METGVFRIPQLEAGLPVPAPRQLASVQHARPDMRFNDGRCDRQGRFWSGTMVLDTA 126 Query: 123 LARADGKLYRYDD-AGLSAPMADGLIVQNGLAWSPDGKTMYLSDSHPSRRLVWAFDYDVD 181 L GKLYR D AG +A LIV NGLA+SPDG+T+YLSDSH SR+ VWAFDYD+D Sbjct: 127 LGVPAGKLYRLDSRAGRVEAVAGDLIVPNGLAFSPDGRTLYLSDSHASRQAVWAFDYDID 186 Query: 182 SGTPSRRRVFADLNHHRGRPDGAAMDVDGCYWICANDAGCVLRFTPDGKLDRTIELPAKK 241 +GTP RR+F D++ H GRPDGAA+D DGCYWIC NDAG V RFTP G+LDR++ +P K Sbjct: 187 TGTPHNRRLFIDMHAHPGRPDGAAVDADGCYWICGNDAGLVHRFTPQGRLDRSLPVPVAK 246 Query: 242 PSMCAFGGDDMKTMIVTSISLGAPAGDDGAGRIWTLNPGVAGMHD 286 P+MCAFGG + T+ VTSI + GD +G + L PG G+ + Sbjct: 247 PAMCAFGGPGLDTLFVTSIRVD---GDSLSGATFALCPGTRGLDE 288 >SMa0717_2 [G] COG3386 Gluconolactonase Sme Sinorhizobium meliloti Length = 302 Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 144/292 (49%), Gaps = 15/292 (5%) Query: 3 VLPLNDQRYDVAESPFWHATQSAWYWVDIPRKLICR-QTADGDCQQWQLLEMVACIAPDD 61 VLP Q + E+P W + YWVDI + R G + + ++V+ + P Sbjct: 19 VLPWGAQ---LGEAPVWVEREKRLYWVDILHPAVHRFDPVTGKNESCNVAKLVSAVLPTR 75 Query: 62 DGGLIAGMHTGIFSVRLQDDGHAQLSKLAQPAGLQADQRFNDGRCDRQGRFWSGVMCLDM 121 + GLI G V D + A+P + R ND + D GR W G M LD+ Sbjct: 76 NEGLIVASQDG---VEHFDFDRGDFNPFAEPEPGLPENRLNDAKVDPSGRLWVGSMRLDV 132 Query: 122 SLARADGKLYRYDDAGLSAPMADGLIVQNGLAWSPDGKTMYLSDSHPSRRLVWAFDYDVD 181 S R G LYR AG G V NGLAWSPD T Y D+ P +++A+D+D Sbjct: 133 S--RPTGSLYRLTSAGEVTRAGSGFTVANGLAWSPDSSTFYFVDTVPG--IIYAYDFDAR 188 Query: 182 SGTPSRRRVFADLNHHRGRPDGAAMDVDGCYWICANDAGCVLRFTPDGKLDRTIELPAKK 241 G+ + RRVF + GRPDG A+D DG W D V R+ PDG+LDR +ELP + Sbjct: 189 EGSIANRRVFVTVPEAEGRPDGLAVDADGGVWCAIWDGWRVNRYRPDGRLDRAVELPVPR 248 Query: 242 PSMCAFGGDDMKTMIVTSISLGAPAGD----DGAGRIWTLNPGVAGMHDAPF 289 P+ AFGGD++ T+ +TS PA +G I+ NPG G+ + F Sbjct: 249 PTSVAFGGDELATLFITSARTRLPASTLTEAPLSGGIFACNPGARGLPTSLF 300 >AGpA685_2 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 279 Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 104/282 (36%), Positives = 145/282 (51%), Gaps = 12/282 (4%) Query: 13 VAESPFWHATQSAWYWVDIPRKLICR-QTADGDCQQWQLLEMVACIAPDDDGGLIAGMHT 71 + ESP WH + A YWVDI + R A G + + ++V+ + P G L+ Sbjct: 3 LGESPVWHEGEDALYWVDILHPAVHRFDPATGRNETCETGKLVSAVIPVTGGRLLVASQD 62 Query: 72 GIFSVRLQDDGHAQLSKLAQPAGLQADQRFNDGRCDRQGRFWSGVMCLDMSLARADGKLY 131 G V D +L+ P AD R ND +C G W G M +D S + G LY Sbjct: 63 G---VEWLDFASGRLTPFVSPEAGIADNRLNDAKCGPDGAIWVGSMRIDAS--KPTGALY 117 Query: 132 RYDDAGLSAPMADGLIVQNGLAWSPDGKTMYLSDSHPSRRLVWAFDYDVDSGTPSRRRVF 191 R + G S G+IV NGL WSPDG+T Y D+ P L+ A+D D +G S+RR F Sbjct: 118 RINANGASERKEGGIIVSNGLGWSPDGRTFYFVDTVPG--LIHAYDCDPATGALSQRREF 175 Query: 192 ADLNHHRGRPDGAAMDVDGCYWICANDAGCVLRFTPDGKLDRTIELPAKKPSMCAFGGDD 251 A + GRPDG A+D +G W D CV R+ P+GKLD+ I++P +PS AFGG D Sbjct: 176 ARIPVADGRPDGLAVDAEGGVWCAIWDGWCVRRYLPNGKLDQVIDMPVPRPSSIAFGGPD 235 Query: 252 MKTMIVTSISLGAPAGDDG----AGRIWTLNPGVAGMHDAPF 289 + T+ +TS PA +G +++ PG++G A F Sbjct: 236 LSTLFITSARTRLPASTLADAPLSGGLFSCRPGISGARIAMF 277 >CC1805 Non COG Length = 293 Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 138/273 (50%), Gaps = 15/273 (5%) Query: 6 LNDQRYDVAESPFWHATQSAWYWVDIPRKLICRQTA-DGDCQQWQLLEMVACIAPDDDGG 64 + +R + ESP W A YWVD I R + + + + + G Sbjct: 8 IGKERCRLGESPLWDADAGVLYWVDSMAPAIWRYDPFTSEQRSIPAPKPIGSVVLGRPGE 67 Query: 65 LIAGMHTGIFSVRLQDDGHAQLSKLAQPAGLQADQRFNDGRCDRQGRFWSGVMCLDMSLA 124 LIAG+ G++ V+L D G + +A P L +RFNDG+ DRQGRF +G M + Sbjct: 68 LIAGLADGVYRVQL-DTG--AFTPIALPDTLAPIERFNDGKADRQGRFVTGTMAMHNETG 124 Query: 125 RADGKLYRYDDAGLSAPM-ADGLIVQNGLAWSPDGKTMYLSDSHPSRRLVWAFDYDVDSG 183 R GKLYR+ G + + + + N +SP G T+Y +DS R +VWAF YD +G Sbjct: 125 RI-GKLYRFSAGGAWEVLPTEPIEIANSTCFSPSGDTLYFADSL--RHMVWAFSYDPKTG 181 Query: 184 TPSRRRVFADLNHHRGRPDGAAMDVDGCYWICANDAGCVLRFTPDGKLDRTIELPAKKPS 243 +R F D PDGA +D +G W+ A ++R +PDG+LDR +E PA S Sbjct: 182 AVGEKRDFFDTTGFNSAPDGATVDAEGHIWLALVQAQKLIRISPDGRLDRVVESPAPFCS 241 Query: 244 MCAFGGDDMKTMIVTSISLGAPAGDDGAGRIWT 276 AFGG+D+ + VTSIS D GR+ T Sbjct: 242 CPAFGGEDLDILYVTSIS-------DSGGRLKT 267 >AGl1336 [G] COG3386 Gluconolactonase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 322 Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 129/256 (50%), Gaps = 7/256 (2%) Query: 6 LNDQRYDVAESPFWHATQSAWYWVDIPRKLICRQTADGDCQQWQLLEMVACIAPDDDGGL 65 L D V ESP W ++VDI I + G Q++ + + C+ + Sbjct: 43 LIDTPLRVGESPTWDERTGDLWFVDILAPAIFCLSPSGKLQRFDMPAQIGCLGLCQSNLI 102 Query: 66 IAGMHTGIFSVRLQDDGHAQLSKLAQPAGLQADQRFNDGRCDRQGRFWSGVMCLDMSLAR 125 +A + TG V L + + +L L P +AD R NDG+ G FW G + + Sbjct: 103 VAALKTG---VHLLNPQNGELELLCDPDEGRADSRLNDGKVGPDGHFWVGTRD-EADVPT 158 Query: 126 ADGKLYRYDDAGLSAPMADG-LIVQNGLAWSPDGKTMYLSDSHPSRRLVWAFDYDVDSGT 184 + +LYR +G DG ++ NGLAWSPD MY SDS S L+ FD+DV +G Sbjct: 159 GNARLYRVSSSGHVERFIDGDMLTSNGLAWSPDETRMYHSDS--SGLLLQVFDFDVQTGR 216 Query: 185 PSRRRVFADLNHHRGRPDGAAMDVDGCYWICANDAGCVLRFTPDGKLDRTIELPAKKPSM 244 + D GRPDGAA D +GCYW AG + RFTPDG+L ++P K P+M Sbjct: 217 LGPAKRLHDFQPDEGRPDGAATDSEGCYWSAGVQAGRLNRFTPDGELFEIYKMPFKGPTM 276 Query: 245 CAFGGDDMKTMIVTSI 260 FGG ++KT+ VTS+ Sbjct: 277 PCFGGPELKTLYVTSL 292