BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0189.p (198 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0831 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Rso... 224 1e-58 AGl3333 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu... 205 6e-53 SMc04145 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sm... 201 8e-52 AGl1767 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu... 167 1e-41 DRA0222 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Dra... 132 3e-31 >RSp0831 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Rso Ralstonia solanacearum Length = 282 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 105/195 (53%), Positives = 137/195 (70%) Query: 1 VLHFGGRSLEAPFEQLMHANIQGTYNLYEGVHKRGIRRVIYASSSHAVGYYPTTRRIDAD 60 ++H GG S+E PF++++ ANIQGTY+LYE + G++R+ +ASS+HA+G+Y IDA Sbjct: 85 IVHLGGISVERPFDEILPANIQGTYHLYEAARRHGVKRIAFASSNHAIGFYRQGEVIDAR 144 Query: 61 SPLRPDGLYGLTKCFGESLSRYYFDRFGVETVCLRIGSCFPEPRNARMLATFLSYDDFVE 120 P RPDG YGL+K FGE L +YFDR+G+ETV +RIGS FPE ++ RML T+L YDD + Sbjct: 145 VPTRPDGYYGLSKVFGEQLGSFYFDRYGIETVAIRIGSSFPEAKDRRMLVTWLGYDDLEQ 204 Query: 121 LVRCALFTPRVGHTIVYGVSDNRIAWWDNGKAGHLGFVAQDSADAFAERFPFGGAWPAAD 180 L+R ALF P VG TIVYG+S NR AWWDN A HLG+V S++AF + A D Sbjct: 205 LIRRALFVPNVGFTIVYGMSGNREAWWDNRHAAHLGYVPAQSSEAFRAQVEAQPPLAADD 264 Query: 181 DAGNFQGGPFILAGP 195 A FQGG F+ AGP Sbjct: 265 PAARFQGGAFVKAGP 279 >AGl3333 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 283 Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 126/192 (65%), Gaps = 1/192 (0%) Query: 1 VLHFGGRSLEAPFEQLMHANIQGTYNLYEGVHKRGIRRVIYASSSHAVGYYPTTRRIDAD 60 ++H GG S+E PFEQ++ NI G YNLYE G R+++ASS+H +GYYP T R+ D Sbjct: 84 IVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD 143 Query: 61 SPLRPDGLYGLTKCFGESLSRYYFDRFGVETVCLRIGSCFPEPRNARMLATFLSYDDFVE 120 P RPDGLYG++KCFGE+L+R YFD+FG ET +RIGSC PEP N RML+T+ S+DDFV Sbjct: 144 VPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNYRMLSTWFSHDDFVS 203 Query: 121 LVRCALFTPRVGHTIVYGVSDNRIAWWDNGKAGHLGFVAQDSADAFAERFPFGGAWPAAD 180 L+ P +G +V+G S N WWDN G LG+ +D+A+AF P + Sbjct: 204 LIEAVFRAPVLGCPVVWGASANDAGWWDNSHLGFLGWKPKDNAEAFRRHITETTPPPDPN 263 Query: 181 DA-GNFQGGPFI 191 DA FQGG F+ Sbjct: 264 DALVRFQGGTFV 275 >SMc04145 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sme Sinorhizobium meliloti Length = 261 Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 95/188 (50%), Positives = 127/188 (67%), Gaps = 2/188 (1%) Query: 1 VLHFGGRSLEAPFEQLMHANIQGTYNLYEGVHKRGIRRVIYASSSHAVGYYPTTRRIDAD 60 +LH G S+E+ F+ L+ ANI GTYNLYE K G+ R+++AS++H G++P +D Sbjct: 67 ILHLGAISVESDFDALLQANILGTYNLYEAARKAGVNRILFASTNHVTGFHPIGETLDHL 126 Query: 61 SPLRPDGLYGLTKCFGESLSRYYFDRFGVETVCLRIGSCFPEPRNARMLATFLSYDDFVE 120 SP RPD LYG++KCFGE LSR YFD++G+ET CLRIGSCF EP N RML+T+LS DF+ Sbjct: 127 SPRRPDSLYGVSKCFGEDLSRLYFDKYGMETACLRIGSCFAEPTNRRMLSTWLSPRDFLA 186 Query: 121 LVRCALFTPRVGHTIVYGVSDNRIAWWDNGKAGHLGFVAQDSADAFAERFPFGGAWPAAD 180 LVR L P++GH ++YGVS NR WW NG A LG+ QDS++ + P+ Sbjct: 187 LVRRLLDAPKIGHLVLYGVSANRDVWWSNGHADFLGWRPQDSSEPYRHEIEKREEEPS-- 244 Query: 181 DAGNFQGG 188 D +QGG Sbjct: 245 DGVRYQGG 252 >AGl1767 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 265 Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 79/192 (41%), Positives = 121/192 (63%), Gaps = 1/192 (0%) Query: 1 VLHFGGRSLEAPFEQLMHANIQGTYNLYEGVHKRGIRRVIYASSSHAVGYYPTTRRIDAD 60 ++H GG S+E F+ + AN++G YNLYE G+ R+++ASS+H +GYYP +++ D Sbjct: 67 IVHLGGVSVERAFDPIEAANLRGVYNLYEAARLNGMPRILFASSNHTIGYYPQGQQLAPD 126 Query: 61 SPLRPDGLYGLTKCFGESLSRYYFDRFGVETVCLRIGSCFPEPRNARMLATFLSYDDFVE 120 +P PDGLYG++K FGE+++ Y +FG ET +RIGSC +P N RML+T+LS+ DFV Sbjct: 127 TPFLPDGLYGVSKIFGEAMASLYHSKFGQETAIVRIGSCEEKPSNWRMLSTWLSHGDFVS 186 Query: 121 LVRCALFTPRVGHTIVYGVSDNRIAWWDNGKAGHLGFVAQDSADAFAERFPFGGAWPAAD 180 L+ P++G +++GVS N +WWDN LG+ +D+A + + P + Sbjct: 187 LIEATFRAPKLGCPVIWGVSANDDSWWDNSHVDFLGWQRRDNAADYRAEIERDVSRPDPE 246 Query: 181 DA-GNFQGGPFI 191 A +QGG FI Sbjct: 247 AAIAKYQGGIFI 258 >DRA0222 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Dra Deinococcus radiodurans Length = 288 Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 98/167 (58%) Query: 1 VLHFGGRSLEAPFEQLMHANIQGTYNLYEGVHKRGIRRVIYASSSHAVGYYPTTRRIDAD 60 V+H G E + + NI GTY++ E + G+RRV +ASS H VG+YP T I Sbjct: 72 VIHLAGIPDEDSYANIRAVNIDGTYHVLEAARQAGVRRVAFASSIHTVGFYPRTEIISPT 131 Query: 61 SPLRPDGLYGLTKCFGESLSRYYFDRFGVETVCLRIGSCFPEPRNARMLATFLSYDDFVE 120 P+RPD YG++K FGE+L R Y++R+G+E V +RI S P P++ R L+T+LS D + Sbjct: 132 VPVRPDTYYGVSKVFGEALGRMYWERYGLEFVGVRICSFQPRPKDRRHLSTWLSPRDATQ 191 Query: 121 LVRCALFTPRVGHTIVYGVSDNRIAWWDNGKAGHLGFVAQDSADAFA 167 L A+ P VG +V G+S N W LG+V QD A+ FA Sbjct: 192 LFARAVTAPDVGFLVVAGISGNTRRWMSPEGWDVLGYVPQDDAERFA 238