BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0143.p         (206 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0585 [GEPR] COG0477 Permeases of the major facilitator superf...    70   2e-12
AGc4938 [GEPR] COG0477 Permeases of the major facilitator superf...    67   2e-11
PA3532 [GEPR] COG0477 Permeases of the major facilitator superfa...    65   1e-10
SMc03889 [GEPR] COG0477 Permeases of the major facilitator super...    64   3e-10
BMEI0267 [GEPR] COG0477 Permeases of the major facilitator super...    62   1e-09

>RSc0585 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 408

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 4/132 (3%)

Query: 75  AGFAGMMLLARLVGDRLKERWGARKVVGFGSLLAAVGVFIAVAALDIPMAIFGFAIAGTG 134
           A F+G M LAR  GD  + RWG  +V+G   +LA  G+ +A+   D    + GFA+ G G
Sbjct: 272 AAFSGGMALARFGGDAARARWGNTRVLGVSGVLATGGILLALLWPDPAAVLAGFALMGVG 331

Query: 135 VAMVFPFVFSAAGRH----GAIALAGVATLSYSGGLIGPPVVGFLAHGFGLQAGLAFIGT 190
            A + P  F  A R      A  +A VA  +Y G LIGP  +G +AH   L+ GL+ +  
Sbjct: 332 AANMVPIFFVTASRMPGVPAAEGIAAVARFAYVGMLIGPVFIGMIAHHSNLRWGLSLVAL 391

Query: 191 LCIAVALAASRA 202
             + +A+A  RA
Sbjct: 392 TMMLIAVAGPRA 403


>AGc4938 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 398

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)

Query: 75  AGFAGMMLLARLVGDRLKERWGARKVVGFGSLLAAVGVFIAVAALDIPMAIFGFAIAGTG 134
           A F+  M   R  GD +++++GA   + F S ++ +G+ IA  A +  +AI GFAIAG G
Sbjct: 258 AAFSMTMAAMRFAGDLVRDKFGAVNTLRFCSAMSIIGLIIAGVAGNSTIAIIGFAIAGIG 317

Query: 135 VAMVFPFVFSAAGRHGAIA----LAGVATLSYSGGLIGPPVVGFLAHGFGLQA 183
           ++ + P  FSAAG    +A    L+ V T+ YSG L+ P  +GF+A   GL +
Sbjct: 318 ISNMVPIAFSAAGNMPGLAPGIGLSVVTTMGYSGILVAPSAIGFIAEHTGLAS 370


>PA3532 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
           Pseudomonas aeruginosa
          Length = 383

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 6/113 (5%)

Query: 75  AGFAGMMLLARLVGDRLKERWGARKVV-GFGSLLAAVGVFIAVAALDIPMAIFGFAIAGT 133
           A F+  M++ RL GDRL+ R     ++ G GSL A +G+ +A+ +    ++I GF + G 
Sbjct: 245 AAFSAAMVVGRLFGDRLRGRIDDAPLLRGLGSL-ATLGMLVALFSPWPALSIAGFGVVGL 303

Query: 134 GVAMVFPFVFSAAGRHG----AIALAGVATLSYSGGLIGPPVVGFLAHGFGLQ 182
           G++++ P V SAAG        I +A V+T+ Y G L+GPP++G LAH  GL+
Sbjct: 304 GLSVMVPIVISAAGNQPGIDPVIGVAAVSTVGYGGLLMGPPLIGLLAHEIGLR 356


>SMc03889 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 379

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 52  FQDDGVQASVRFAGMMLLARLVGAGFAGMMLLARLVGDRLKERWGARKVVGFGSLLAAVG 111
           +  D + ASV  +G         A F+  M   R  GD +++R GA   +   ++ A  G
Sbjct: 223 YLKDELGASVELSGFGF------AAFSATMAAMRFAGDHVRDRLGATLTLRICTVTALAG 276

Query: 112 VFIAVAALDIPMAIFGFAIAGTGVAMVFPFVFSAAGR----HGAIALAGVATLSYSGGLI 167
           + +A  A +  +AI GFA+AG G++ + P  FSAAG        I L+   T+ YSG L 
Sbjct: 277 MVLAGLAPNAVLAILGFALAGIGISNMVPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLF 336

Query: 168 GPPVVGFLAHGFGLQAGLAFIGTLCIAVALAASRA 202
            P ++GF+A   G     A +  L I V L +  A
Sbjct: 337 APSLIGFIAEHSGFAIIFACVPVLFIVVLLLSHHA 371


>BMEI0267 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
           Brucella melitensis
          Length = 397

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 6/113 (5%)

Query: 75  AGFAGMMLLARLVGDRLKERWGARKVVGFGSLLAAVGVFIAVAALDIPMAIFGFAIAGTG 134
           A F+G M + R  GD +++R+GA K +   + +A +G+ I         AI GFAI G G
Sbjct: 259 AAFSGSMAVMRFAGDLVRDRFGAVKTLRACTAIAIIGMLIVGFGNSSATAIIGFAICGIG 318

Query: 135 VAMVFPFVFSAAGR----HGAIALAGVATLSYSGGLIGPPVVGFLAH--GFGL 181
           ++ + P  FS AG     + ++ L+   TL YSG L+ P ++GF+A   GFG+
Sbjct: 319 ISNMVPIAFSMAGNMPGVNPSVGLSIATTLGYSGMLVAPSLIGFVARHSGFGV 371