BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0127.p         (293 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1514 [F] COG3194 Ureidoglycolate hydrolase Pae Pseudomonas aer...    84   3e-16
mll5130 Non COG                                                        81   3e-15
BMEI1430 [F] COG3194 Ureidoglycolate hydrolase Bme Brucella meli...    80   5e-15
SMb20873 [F] COG3194 Ureidoglycolate hydrolase Sme Sinorhizobium...    78   2e-14
SMb20677 [F] COG3194 Ureidoglycolate hydrolase Sme Sinorhizobium...    78   2e-14

>PA1514 [F] COG3194 Ureidoglycolate hydrolase Pae Pseudomonas aeruginosa
          Length = 169

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 11/159 (6%)

Query: 11  RVIVAQTLTPVAFAPFGDAILPPDNGNGCGNGSGNSSPINEGTAQRFDDLTQLDVSEQGG 70
           R +  + LT  AFAPFGD I              +   IN G+ +R+  L  ++ ++   
Sbjct: 2   RTLKIEPLTKEAFAPFGDVI---------ETAGSDYFMINNGSTRRYHKLATVETAQPED 52

Query: 71  EACVAIFRTQDGTHVAPYALTMFERHLLGSQSFVPMAQGRILVVVTQGIGAPDEDAIQAF 130
            A ++IF  +      P  + M ERH LGSQ+F+P+     LVVV      P    ++AF
Sbjct: 53  NAIISIFSAEKLE--MPLRIRMLERHPLGSQAFIPLLGNPFLVVVAPLGDVPVPGLVRAF 110

Query: 131 IVEPGQAVTLRRGVWHHPMITINNGXRRRIRDRATCGGS 169
           +    Q V   RGVWHHP++TI       + DR+  G +
Sbjct: 111 LTNGRQGVNYHRGVWHHPVLTIEKRDDFLVVDRSGSGNN 149


>mll5130 Non COG
          Length = 163

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 79/173 (45%), Gaps = 21/173 (12%)

Query: 13  IVAQTLTPVAFAPFGDAILPPDNGNGCGNGSGNSSPINEGTAQRFDDLTQLDVSEQGGEA 72
           I A+ LT  AFAPFGD I           G  N  PIN G A+R+ DL   + +  G  A
Sbjct: 4   ITARPLTREAFAPFGDVI---------DMGGDNHYPINGGKAERYHDLATAEAT--GPNA 52

Query: 73  CVAIFRTQDGTHVAPYALTMFERHLLGSQSFVPMAQGRILVVV----TQGIGAPDEDAIQ 128
            V I   +   +  P  LTM ERH  GSQ+F+P++    LVVV     +G G P      
Sbjct: 53  RVLISMVRGTPYELPLKLTMVERHPFGSQAFIPLSPRPFLVVVCHDGKEGPGEP-----Y 107

Query: 129 AFIVEPGQAVTLRRGVWHHPMITINNGXRRRIRDRATCGGSRLRDCAYRRPFR 181
           AFI  PGQ +   R +WH  +  +       I DR    GS L +  +   + 
Sbjct: 108 AFITAPGQGINYSRNLWHGVLTPLGEPQDFLIVDRG-GDGSNLEEFHFSHAYE 159


>BMEI1430 [F] COG3194 Ureidoglycolate hydrolase Bme Brucella melitensis
          Length = 169

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 16/171 (9%)

Query: 11  RVIVAQTLTPVAFAPFGDAILPPDNGNGCGNGSGNSSPINEGTAQRFDDLTQLDVSEQGG 70
             +  + LT  AFAPFGD I                  IN GT +R+ DL +++ +    
Sbjct: 4   ETLTVEPLTKEAFAPFGDVIEVE---------GAQLRLINNGTTERYHDLARVEAAGTQT 54

Query: 71  EACVAIFRTQDGTHVAPYALTMFERHLLGSQSFVPMAQGRILVVVTQGIGAPDEDAIQAF 130
            A + IFR Q  +  AP  + M ERH  GSQ+F+P+     LVVV +  GA      +AF
Sbjct: 55  RALINIFRGQ--SFAAPIDIMMMERHPFGSQAFIPLNGRPFLVVVAEDAGAGPARP-RAF 111

Query: 131 IVEPGQAVTLRRGVWHHPMITINNGXRRRIRDRA----TCGGSRLRDCAYR 177
           +    Q V   R +WHHP++ +       + DRA            D AYR
Sbjct: 112 LARGDQGVNYLRNIWHHPLLALEQKSDFLVVDRAGREDNLEEYFFSDYAYR 162


>SMb20873 [F] COG3194 Ureidoglycolate hydrolase Sme Sinorhizobium meliloti
          Length = 170

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 81/170 (47%), Gaps = 15/170 (8%)

Query: 12  VIVAQTLTPVAFAPFGDAILPPDNGNGCGNGSGNSSPINEGTAQRFDDLTQLDVSEQGGE 71
           ++  + LT  AFAPFG  I              +   IN G  +RF  L ++D + +G  
Sbjct: 4   MLSIEPLTREAFAPFGSVI---------EADPASMRFINGGNTERFHALARVDAAGEGAG 54

Query: 72  ACVAIFRTQDGTHVAPYALTMFERHLLGSQSFVPMAQGRILVVVTQGIGA-PDEDAIQAF 130
             + IFR Q    V PY++TM ERH LGSQSF P+     LVVV +  G  P    +  F
Sbjct: 55  VIINIFRGQ--PRVFPYSVTMMERHPLGSQSFSPLRDRPWLVVVAEDQGDRPGRPRV--F 110

Query: 131 IVEPGQAVTLRRGVWHHPMITINNGXRRRIRDRATCGGSRLRDCAYRRPF 180
           I +  Q V   R VWHHP++++       + DR   G + L +  Y   F
Sbjct: 111 IADGRQGVNYGRNVWHHPLMSVGAVSEFIVVDREGPGNN-LEEFHYDEAF 159


>SMb20677 [F] COG3194 Ureidoglycolate hydrolase Sme Sinorhizobium meliloti
          Length = 163

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 14/168 (8%)

Query: 18  LTPVAFAPFGDAILPPDNGNGCGNGSGNSSPINEGTAQRFDDLTQLDVSEQGGEACVAIF 77
           L+   FAPFGD I P D           S PIN G   R+ DL +++ S       V++ 
Sbjct: 9   LSHSEFAPFGDVIEPDD---------AKSFPINAGKCIRYHDLARVETSGPEARTLVSLL 59

Query: 78  RTQDGTHVAPYALTMFERHLLGSQSFVPMAQGRILVVVTQGIGAPDEDAIQAFIVEPGQA 137
           + +   +  P  L M ERH LGSQ+F+P+     LVVV    G    + I AF   PGQ 
Sbjct: 60  KGE--PYDIPLTLKMVERHPLGSQAFIPLTGNPFLVVVAPDEGGEPGEPI-AFETGPGQG 116

Query: 138 VTLRRGVWHHPMITINNGXRRRIRDRATCGGSRLRDCAYRRPFR-RYA 184
           V + + VWH  +  + +     + DR    G  L +  + +P++  YA
Sbjct: 117 VNIAQNVWHGILTPLRSTSEFVVIDRGGS-GCNLEEHFFEKPYQVEYA 163