BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0125.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans...   157   1e-38
BMEII0863 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tr...   150   9e-37
mlr5893 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran...   145   4e-35
CAC3629 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran...   142   4e-34
PH1959 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans...   140   1e-33

>DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport
           system, ATPase component Dra Deinococcus radiodurans
          Length = 386

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 8/154 (5%)

Query: 3   IXDEPTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKIIEQ 62
           I DEPTTALD T+Q QIL L+R+LQ+E+G+SI+F+TH++G  AE+ADR+ VMY G+++E+
Sbjct: 212 IADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYGGRVVEE 271

Query: 63  GPAAELLTRPRHPYTLSLLKS--------RSHGAMQKGQRLETIGGAPPDLSNLPAGCAF 114
           G   E+   PRHPYT+ LL S         +H   Q  +RLE I G  P+  NLP GC F
Sbjct: 272 GDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQPKKRLEAIPGNVPNPLNLPPGCTF 331

Query: 115 AERCKYAVAECSSVQPRDELLSPGHVVSCLRVHQ 148
             RCK+AV +CS   P  E    GH+  C+R  +
Sbjct: 332 EPRCKFAVPQCSQAVPALEDTGGGHMARCIRWRE 365


>BMEII0863 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport
           system, ATPase component Bme Brucella melitensis
          Length = 338

 Score =  150 bits (380), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 100/152 (65%), Gaps = 5/152 (3%)

Query: 3   IXDEPTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKIIEQ 62
           I DEPTTALD T+Q QIL L++ LQ E G+ ++FVTH++G  AE+A R+ VMYAG+I+E 
Sbjct: 185 IADEPTTALDVTIQAQILDLMQKLQSESGMGMLFVTHNLGVVAEIAQRVVVMYAGRIVES 244

Query: 63  GPAAELLTRPRHPYTLSLLKSR-----SHGAMQKGQRLETIGGAPPDLSNLPAGCAFAER 117
           GP  E+   PRHPYT+ LL+S      +    ++G++L TI G  P L+NLP+GCAFA R
Sbjct: 245 GPVKEVFRNPRHPYTMGLLRSMPRLGDATEMKRRGEKLNTIPGMVPGLANLPSGCAFAPR 304

Query: 118 CKYAVAECSSVQPRDELLSPGHVVSCLRVHQV 149
           C +AV  C +  P    ++  H   C+R  ++
Sbjct: 305 CSFAVEACHAAVPPLASVNKHHGSRCIRWQEI 336


>mlr5893 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport
           system, ATPase component Mlo Mesorhizobium loti
          Length = 343

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 98/146 (67%), Gaps = 6/146 (4%)

Query: 3   IXDEPTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKIIEQ 62
           I DEPTTALDATVQ QILLLL+D+Q++ G+++V ++HD+ A A V DR  VMYAG+I+E 
Sbjct: 196 IADEPTTALDATVQAQILLLLKDIQRDTGMALVMISHDLAAVAAVCDRACVMYAGQIVET 255

Query: 63  GPAAELLTRPRHPYTLSLLKS--RSHGAMQKGQRLETIGGAPPDLSNLPAGCAFAERCKY 120
            P   LLT P HPYT  L+ +   SHG      RL  I GAPP   NLP GCA+A RC++
Sbjct: 256 APKHTLLTAPEHPYTRDLIGAIPPSHGPR---MRLTAIAGAPPQ-RNLPPGCAYAPRCRH 311

Query: 121 AVAECSSVQPRDELLSPGHVVSCLRV 146
           A+A C + +P    ++  H V CLR+
Sbjct: 312 AIAVCRTSRPEPRQVAARHSVRCLRL 337


>CAC3629 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport
           system, ATPase component Cac Clostridium acetobutylicum
          Length = 339

 Score =  142 bits (358), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 90/144 (62%)

Query: 1   VQIXDEPTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKII 60
           + I DEPTTALD T+Q QI+ L+ +LQ++LG +I+ +THD+G  A VA RI VMY+G I+
Sbjct: 177 ILIADEPTTALDVTIQAQIMDLMHELQEKLGTAIILITHDLGVVASVAHRIQVMYSGIIV 236

Query: 61  EQGPAAELLTRPRHPYTLSLLKSRSHGAMQKGQRLETIGGAPPDLSNLPAGCAFAERCKY 120
           E+G   ++   P+HPYT +LL+S           L ++ G PPDL   PAGC FA RCKY
Sbjct: 237 ERGTTDDIFENPQHPYTWALLQSVPRLDTANKGELYSLNGTPPDLLKPPAGCPFAARCKY 296

Query: 121 AVAECSSVQPRDELLSPGHVVSCL 144
            +  C    P +  LS  H VSC 
Sbjct: 297 CMGICKEQMPEETKLSETHSVSCW 320


>PH1959 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport
           system, ATPase component Pho Pyrococcus horikoshii
          Length = 322

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 98/146 (67%), Gaps = 5/146 (3%)

Query: 1   VQIXDEPTTALDATVQIQILLLLRDLQKELGLSIVFVTHDIGAAAEVADRIAVMYAGKII 60
           + I DEPTTALD  VQ QI+ L++ L+K+LGLS++F+THD+   AE++DR+AVMYAGK++
Sbjct: 178 IVIADEPTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDRVAVMYAGKLV 237

Query: 61  EQGPAAELLTRPRHPYTLSLLKS--RSHGAMQKGQRLETIGGAPPDLSNLPAGCAFAERC 118
           E GP+ ++   P HPYT  LL +  R H  ++K   LE I G+PP+L N P+GC F  RC
Sbjct: 238 EIGPSEKIYYEPAHPYTQKLLAAIPRLHEDVEK---LEFIPGSPPNLINPPSGCRFHPRC 294

Query: 119 KYAVAECSSVQPRDELLSPGHVVSCL 144
            YA+ +C   +P+   +   H  +C 
Sbjct: 295 PYAMDKCKEEEPKMVEVDKDHYAACW 320