BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0104.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll5686 [GEPR] COG0477 Permeases of the major facilitator superf... 80 3e-15 AGl1729 [GEPR] COG0477 Permeases of the major facilitator superf... 74 2e-13 RSc2323 [GEPR] COG0477 Permeases of the major facilitator superf... 69 6e-12 RSp1417 [GEPR] COG0477 Permeases of the major facilitator superf... 67 5e-11 mll2542 [GEPR] COG0477 Permeases of the major facilitator superf... 65 2e-10 >mll5686 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 502 Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 4/173 (2%) Query: 5 FVPVELMQKRPMIDLRLFRHAPFVGAVLAMFGYASSAQVMMTFLPLYLQNAFSYSAIVAG 64 F+ E + KRPM D +FR PF GA++ S M +LP++ Y +I G Sbjct: 244 FLIAERISKRPMFDFSVFRIRPFSGAIVGSAAMNLSYWPFMIYLPIWFHAGLGYDSISTG 303 Query: 65 LAMLPFALAMIIFPRVGAALT-RYMPLHGVMGLGMALVCAGNVLVAI-AAYAGTYWMV-L 121 LA+L + L ++ P + L+ RY P ++ G+A++ G +L+ +A A W+ L Sbjct: 304 LALLAYTLPTLVMPPLAERLSLRYQP-GIIIPAGLAVIGVGFILMKFGSAAARPDWLTML 362 Query: 122 AGMLVTGSGAGLLNGNTQKAIMNCVPRERTGMASGISTTTRFSAIVLAIACLG 174 G L+ G+G G+ N V +R GMASGI + R ++ + IA +G Sbjct: 363 PGCLIAGAGLGITNTPVTNTTTGSVSSDRAGMASGIDMSARMVSLAVNIAVMG 415 >AGl1729 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 506 Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 4/186 (2%) Query: 5 FVPVELMQKRPMIDLRLFRHAPFVGAVLAMFGYASSAQVMMTFLPLYLQNAFSYSAIVAG 64 FV E +RPM D +FR PF GA++ S M +LP++ Q Y ++ AG Sbjct: 248 FVIAEKRTQRPMFDFSVFRIRPFSGAIIGSAAMNISFWPFMIYLPIWFQAGLGYDSVTAG 307 Query: 65 LAMLPFALAMIIFPRVGAALT-RYMPLHGVMGLGMALVCAGNVLVAI-AAYAGTYWM-VL 121 L +L + L ++ P + L+ RY P H V+ G+ + G +L+ + W+ +L Sbjct: 308 LGLLAYTLPALVMPPLAERLSLRYQP-HLVIPAGLFTIGLGFMLMKFGSGIENASWLTML 366 Query: 122 AGMLVTGSGAGLLNGNTQKAIMNCVPRERTGMASGISTTTRFSAIVLAIACLGXAALPAL 181 G ++ G G GL N V R+GMASGI + R ++ + I +G + + Sbjct: 367 PGCILAGIGLGLTNTPVTNTTTGAVSPARSGMASGIDMSARMISLAINIPIMGFILVEGV 426 Query: 182 GNSLEA 187 SL A Sbjct: 427 RASLRA 432 >RSc2323 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 521 Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 16/182 (8%) Query: 2 LALFVPVELMQKRPMIDLRLFRHAPFVGAVLAMFGYASSAQVMMTFLPLYLQNAFSYSAI 61 ALF+ VE+ PM D +FR F GA+L G S + +LP+Y Q+A A Sbjct: 254 FALFLIVEMRAAHPMFDFSVFRVRNFSGALLGSVGMNFSFWPFIIYLPIYFQSALGQGAA 313 Query: 62 VAGLAMLPFALAMIIFPRVGAALT-RYMPLHGV--------MGLGMALVCAGNVLVAIAA 112 AG+++L + L ++FP +G L RY P G+ +GLG L+ G+ + Sbjct: 314 AAGVSLLAYTLPTLVFPPIGERLALRYRP--GIVIPAGLFTIGLGFFLMLIGSSI----- 366 Query: 113 YAGTYWMVLAGMLVTGSGAGLLNGNTQKAIMNCVPRERTGMASGISTTTRFSAIVLAIAC 172 ++ VL G L+ G+G G+ N V R GMASGI + R ++ + IA Sbjct: 367 DQASWLTVLPGCLLAGAGLGITNTPVTNTTTGSVSPARAGMASGIDMSARMISLAINIAL 426 Query: 173 LG 174 +G Sbjct: 427 MG 428 >RSp1417 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 467 Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 10/208 (4%) Query: 5 FVPVELMQKRPMIDLRLFRHAPFVGAVLAMFGYASSAQVMMTFLPLYLQNAFSYSAIVAG 64 FV E K PMI +RLF F + A F + + ++ FLP + Q+A + AG Sbjct: 243 FVLWERRAKHPMIPMRLFASRAFSSGIAACFLFYAGMYGVVFFLPQFFQSAQGHDPFAAG 302 Query: 65 LAMLPFALAMIIFPRVGAALTRYMPLHGVMGLGMALVCAGNVLVAIAAYAGT-YWMVLAG 123 L +LP+ + + + ++ + VM G+ L G +A AA GT Y ++A Sbjct: 303 LRLLPWTVTLFFIAPLAGSMVDRIGERSVMVTGLLLQAIGFAWIAWAASPGTSYLNLVAP 362 Query: 124 MLVTGSGAGLLNGNTQKAIMNCVPRERTGMASGISTTTRF--SAIVLAIACLGXAALPAL 181 ++++G+G + QKA++ V + G ASG+ R A +AIA + + L Sbjct: 363 LVISGAGISMAGPAAQKAVLGAVTVQDIGKASGVFNMFRILGGATGIAIAVVAFSIWGNL 422 Query: 182 GNSLEALHIAQIGFAHAF---ALLTLAA 206 G+ + GFAH A+L++AA Sbjct: 423 GSEKDFSE----GFAHVMGVCAVLSMAA 446 >mll2542 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 505 Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%) Query: 2 LALFVPVELMQKRPMIDLRLFRHAPFVGAVLAMFGYASSAQVMMTFLPLYLQNAFSYSAI 61 LA+F+ E RPM+ L LFR F A +A F ++ + F ++LQ +S Sbjct: 237 LAVFLGFEARTPRPMLPLGLFRDVRFAVANVASFALGFTSYSCVFFFSMFLQQVQGWSPT 296 Query: 62 VAGLAMLP-FALAMIIFPRVGAALTRYMPLHGVMGLGMALVCAGNVLVAIA----AYAG- 115 GL M P F + +++ P +G RY H + L+ AG VL+ ++ +AG Sbjct: 297 QTGLRMAPAFLVQIVVSPWIGRLSARYG--HSL------LMTAGYVLIGLSMLGMCWAGP 348 Query: 116 --TYWMVLAGMLVTGSGAGLLNGNTQKAIMNCVPRERTGMASGISTTTRFSAIVLAIACL 173 Y ++ + G G L A M+ PRER+GM S + TR S + + IA L Sbjct: 349 STPYALLCVLFTINGLGNSLAIPTGSAAAMSYAPRERSGMVSAVINATRQSGLAIGIALL 408 Query: 174 G 174 G Sbjct: 409 G 409