BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0101.p         (515 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1727_2 [T] COG2199 FOG Pae Pseudomonas aeruginosa                   162   2e-39
CC3094_3 [T] COG2199 FOG Ccr Caulobacter vibrioides                   154   4e-37
all1175_3 [T] COG2199 FOG Nos Nostoc sp. PCC 7120                     154   6e-37
PA0575_3 [T] COG2199 FOG Pae Pseudomonas aeruginosa                   153   1e-36
slr1305_3 [T] COG2199 FOG Syn Synechocystis                           151   3e-36

>PA1727_2 [T] COG2199 FOG Pae Pseudomonas aeruginosa
          Length = 194

 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 16/195 (8%)

Query: 306 LARSEREKICLIEQLEKEKTRAYQLASHDYLTGIPNRMLFSELAGAELSRAKRSPNLYAL 365
           LAR+ RE I              QLA HD LT +PNRML  +     + +A R    +A+
Sbjct: 15  LARANRELI--------------QLALHDNLTKLPNRMLLDDRLEQAIQQAIRDDRRFAV 60

Query: 366 FFIDLDGFKPINDTLGHAVGDLLLKAVAQRLCTNLREYDLVARLGGDEFVVLLSDIKYQS 425
            F+DLDGFK +ND  GH +GDLLL  VA+R+  N+R  D +ARLGGDEFV+L+ + +  +
Sbjct: 61  LFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVRAQDTIARLGGDEFVLLI-EAREPA 119

Query: 426 QIADIADKLIKAVGAPYLNLGGHEVGTSLSIGIALYPDDGHTVDELLSKADAAMYAAKKD 485
             A +A+KL+K +  PY  +  HEV  S SIGIALYP DG T  EL+  ADAAMY AK  
Sbjct: 120 DAATLAEKLVKRISQPY-QISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQ 178

Query: 486 GKGAYRFHDSSVHSG 500
           G+  Y F +SS+++ 
Sbjct: 179 GRNGYCFFESSMNAN 193


>CC3094_3 [T] COG2199 FOG Ccr Caulobacter vibrioides
          Length = 197

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 1/176 (0%)

Query: 329 QLASHDYLTGIPNRMLFSELAGAELSRAKRSPNLYALFFIDLDGFKPINDTLGHAVGDLL 388
           +LA +D LT +PNR+LF +  G  L+R  R  +  A+ F+DLD FK +NDTLGH +GD L
Sbjct: 9   RLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDAL 68

Query: 389 LKAVAQRLCTNLREYDLVARLGGDEFVVLLSDIKYQSQIADIADKLIKAVGAPYLNLGGH 448
           LK  A+RL   +RE D VARLGGDEF ++ + +   +    +A ++++A+ AP+ +L GH
Sbjct: 69  LKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPF-DLQGH 127

Query: 449 EVGTSLSIGIALYPDDGHTVDELLSKADAAMYAAKKDGKGAYRFHDSSVHSGLSGR 504
            V    S+G++L P DG   DELL KAD A+Y AK DG+GAY F + ++   L  R
Sbjct: 128 HVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAMDEQLQAR 183


>all1175_3 [T] COG2199 FOG Nos Nostoc sp. PCC 7120
          Length = 183

 Score =  154 bits (388), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 120/188 (63%), Gaps = 7/188 (3%)

Query: 319 QLEKEKTRAYQLASHDYLTGIPNRMLFSELAGAELSRAKRSPNLYALFFIDLDGFKPIND 378
           Q  +EK R YQ A HD LTG+PNR+LF+EL    L+ A RS    A+ F+DLD FK IND
Sbjct: 3   QQVEEKIR-YQ-ALHDLLTGLPNRLLFNELLAKALANASRSQESLAVMFLDLDRFKVIND 60

Query: 379 TLGHAVGDLLLKAVAQRLCTNLREYDLVARLGGDEFVVLLSDIKYQSQIADIADKLIKAV 438
           TLGH +GD LL++VAQRL   LR  D V+R GGDEF +LL  I Y  ++   A +++KA+
Sbjct: 61  TLGHTLGDRLLQSVAQRLRDCLRSGDTVSRWGGDEFTILLPHISYIEEVTQAACRILKAL 120

Query: 439 GAPYLNLGGHEVGTSLSIGIALYPDDGHTVDELLSKADAAMYAAKKDGKGAYRFHDSSVH 498
              + +L GHE+  S S+GIAL        + L+  ADAA+Y AK +G+  Y+F+ +S  
Sbjct: 121 EEVF-HLDGHELYVSASLGIALLDHHSPDAEALIKHADAALYHAKDEGRNNYQFYTTS-- 177

Query: 499 SGLSGRLP 506
             LSG+ P
Sbjct: 178 --LSGKTP 183


>PA0575_3 [T] COG2199 FOG Pae Pseudomonas aeruginosa
          Length = 182

 Score =  153 bits (386), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 102/160 (63%), Gaps = 2/160 (1%)

Query: 328 YQLASHDYLTGIPNRMLFSELAGAELSRAKRSPNLYALFFIDLDGFKPINDTLGHAVGDL 387
           YQ A HD LTG+PNR+LF       L  A+      A+ FIDLD FK IND+LGH +GDL
Sbjct: 10  YQ-AHHDPLTGLPNRLLFESRLNHALDEAREESRPGAVLFIDLDRFKHINDSLGHPIGDL 68

Query: 388 LLKAVAQRLCTNLREYDLVARLGGDEFVVLLSDIKYQSQIADIADKLIKAVGAPYLNLGG 447
           LLKA+A+RL   LR+ D VARLGGDEF++LL  +  +S    +A KL+ A  AP+    G
Sbjct: 69  LLKAIAERLRDQLRDVDTVARLGGDEFIILLPGLHQESDAEHVARKLLNAFTAPF-QADG 127

Query: 448 HEVGTSLSIGIALYPDDGHTVDELLSKADAAMYAAKKDGK 487
           HE   S S+GIAL+P DG     L+  ADAAMY AK  G+
Sbjct: 128 HEFFVSASVGIALFPKDGDDAPTLVKNADAAMYRAKSRGR 167


>slr1305_3 [T] COG2199 FOG Syn Synechocystis
          Length = 188

 Score =  151 bits (382), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 4/187 (2%)

Query: 322 KEKTRA---YQLASHDYLTGIPNRMLFSELAGAELSRAKRSPNLYALFFIDLDGFKPIND 378
           KEK +A   +  A +D+LTG+PNR+L  +     +  A R  +++ L F+DLD FK +ND
Sbjct: 1   KEKQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIESALRQKHIFGLMFLDLDNFKKVND 60

Query: 379 TLGHAVGDLLLKAVAQRLCTNLREYDLVARLGGDEFVVLLSDIKYQSQIADIADKLIKAV 438
           TLGH  GD LL  V++RL   LR+ D VARLGGDEF+++L  + +  ++  IA +L++ +
Sbjct: 61  TLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIILDQVSHSRKLMAIAQRLLRVM 120

Query: 439 GAPYLNLGGHEVGTSLSIGIALYPDDGHTVDELLSKADAAMYAAKKDGKGAYRFHDSSVH 498
             P +NL G E     SIGI ++PDDG   D LL  AD AMYAAK  G+  +RF    ++
Sbjct: 121 RQP-VNLQGLEFFVHGSIGITVFPDDGFHADVLLRNADTAMYAAKLAGRNMFRFFTPHMN 179

Query: 499 SGLSGRL 505
                R+
Sbjct: 180 QAAQQRM 186