BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0090.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2868 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   129   1e-30
RSc1883 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   125   2e-29
AGpA365 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   121   3e-28
SMb21039 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tra...    97   8e-21
SMc02419 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tra...    82   2e-16

>RSc2868 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Rso Ralstonia solanacearum
          Length = 304

 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/76 (80%), Positives = 72/76 (94%)

Query: 1   LQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYMLSGEYWISFYPGIALLVVIVAI 60
           LQ+A AITLEATLSFLGLGVPITEPSLGLLI+NG+QYMLSG+YWISF+PG+ALL+ IV++
Sbjct: 227 LQVASAITLEATLSFLGLGVPITEPSLGLLIANGFQYMLSGKYWISFFPGLALLLTIVSM 286

Query: 61  NLVGDRLRDVMNPRWQ 76
           NLV D+LRDV+NPR Q
Sbjct: 287 NLVSDQLRDVLNPRLQ 302


>RSc1883 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Rso Ralstonia solanacearum
          Length = 311

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/74 (86%), Positives = 72/74 (97%)

Query: 1   LQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYMLSGEYWISFYPGIALLVVIVAI 60
           LQ+ARAITLEATLSFLGLGVPITEPSLGLLI+NGYQYMLSG+YWIS YPG+ALL+ +VAI
Sbjct: 235 LQVARAITLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAI 294

Query: 61  NLVGDRLRDVMNPR 74
           NLVGDRLR+V+NPR
Sbjct: 295 NLVGDRLREVLNPR 308


>AGpA365 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 318

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 70/77 (90%)

Query: 1   LQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYMLSGEYWISFYPGIALLVVIVAI 60
           +Q+ARAITLEATLSFLGLGVP+TEPSLGLLIS+GY+++LSG YWI+ +PGIALLV I AI
Sbjct: 241 MQVARAITLEATLSFLGLGVPVTEPSLGLLISSGYEFILSGTYWIALFPGIALLVTIFAI 300

Query: 61  NLVGDRLRDVMNPRWQK 77
           NLVGDRLR +++P+  +
Sbjct: 301 NLVGDRLRQLVDPKAAR 317


>SMb21039 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sme Sinorhizobium meliloti
          Length = 291

 Score = 97.1 bits (240), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 61/74 (82%)

Query: 1   LQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYMLSGEYWISFYPGIALLVVIVAI 60
           +++  A+ LEATLSFLGLGVPI +PSLG  ++NG+QY+L+G+YWIS +PG+AL  +I +I
Sbjct: 214 IEVGHAVALEATLSFLGLGVPIDKPSLGSAVANGFQYLLTGQYWISLFPGLALFGLIASI 273

Query: 61  NLVGDRLRDVMNPR 74
           NLVG+ +R  ++PR
Sbjct: 274 NLVGEDVRRSLDPR 287


>SMc02419 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sme Sinorhizobium meliloti
          Length = 316

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 54/74 (72%)

Query: 1   LQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYMLSGEYWISFYPGIALLVVIVAI 60
           L    AI  EATLSFLG+G+P ++PSLG LI  G Q++ SG +WI  +P I L +++VA+
Sbjct: 241 LNFGMAILTEATLSFLGIGMPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVIQLCLLVVAV 300

Query: 61  NLVGDRLRDVMNPR 74
           N++GD LRD +NP+
Sbjct: 301 NMLGDWLRDALNPK 314