BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0078.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr4772 [G] COG1175 ABC-type sugar transport systems, permease c... 375 e-104 BMEII0753 [G] COG1175 ABC-type sugar transport systems, permease... 365 e-101 SMc02872 [G] COG1175 ABC-type sugar transport systems, permease ... 355 7e-98 mlr7001 [G] COG1175 ABC-type sugar transport systems, permease c... 131 2e-30 BS_yurN [G] COG1175 ABC-type sugar transport systems, permease c... 119 1e-26 >mlr4772 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 334 Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/305 (60%), Positives = 232/305 (76%), Gaps = 3/305 (0%) Query: 1 VKTARP--WHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILF 58 ++ RP WHI FLAPAV++Y+ LPL TL+L + N FVGLDN+RT+ Sbjct: 30 IRPKRPFRWHIAIFLAPAVLVYTAIMILPLAGTLQLSLF-RNIEQHQVFVGLDNFRTLFG 88 Query: 59 DSDWSTAFWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSV 118 D +WS FWNA+ NNV FF IHML+QNPIG++LA L S LR A YRT IF+PT+LS Sbjct: 89 DPNWSVNFWNALRNNVWFFIIHMLVQNPIGVMLAALLSSPRLRFAAFYRTAIFVPTILSF 148 Query: 119 VIIGFIWQLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMML 178 VI+GF W+LI+SPLWGV +M LVGL F P+LG+E AL LSLISVWQ++GIPMML Sbjct: 149 VIVGFAWKLILSPLWGVAPHMMDLVGLKSLFTPWLGKEEYALTALSLISVWQFVGIPMML 208 Query: 179 IYAALLAVPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSV 238 IYAALL++P+EV+EAA +G + + FW+IKLPLI P++G+++ILTFV NFNAFDLIY+ Sbjct: 209 IYAALLSIPDEVIEAAECDGITGMSQFWKIKLPLILPSIGIISILTFVGNFNAFDLIYTA 268 Query: 239 KGALAGPNYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRK 298 +GALAGPNYS+D+LGTF YR FFG+Q QVG P MGAA+AT+MFL+IL GV Y +LVQ + Sbjct: 269 QGALAGPNYSTDILGTFLYRAFFGFQLQVGDPNMGAAIATMMFLIILGGVCVYLFLVQTR 328 Query: 299 LTRYE 303 L RY+ Sbjct: 329 LRRYQ 333 >BMEII0753 [G] COG1175 ABC-type sugar transport systems, permease components Bme Brucella melitensis Length = 339 Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/302 (58%), Positives = 232/302 (76%), Gaps = 1/302 (0%) Query: 2 KTARPWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDSD 61 K + WHI FL P V+IY+ LPL++TLR FY D G FVGL N+ + D + Sbjct: 38 KRPKRWHIAVFLLPCVLIYTAVMVLPLIETLRQAFYNVVD-GQRVFVGLANFEALFGDPN 96 Query: 62 WSTAFWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVII 121 WS FWNA+ NNV FF IHML+QNPIG+ LA + SL LR + YRT +FLPTLLS VI+ Sbjct: 97 WSRDFWNALKNNVIFFLIHMLVQNPIGIFLAAMLSLPRLRFSAFYRTALFLPTLLSFVIV 156 Query: 122 GFIWQLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYA 181 GFIW+LI+SP+WGV +M LVGL FAP+LG+ TAL T+SL+SVWQ++GIPMMLIYA Sbjct: 157 GFIWKLILSPIWGVAPWMMDLVGLKWAFAPWLGKADTALVTVSLVSVWQFVGIPMMLIYA 216 Query: 182 ALLAVPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGA 241 ALL +PEE++EAA +G + F++IKLPLI P++GL++++TFVANFNAFDLIYS++GA Sbjct: 217 ALLNIPEEIVEAAECDGITGWSQFFKIKLPLILPSIGLISVMTFVANFNAFDLIYSMQGA 276 Query: 242 LAGPNYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLTR 301 LAGP+ ++D+LGTF YRTFFG+Q Q+G+P+MGA +A +MFL+ILAGV Y + +QR++ R Sbjct: 277 LAGPDKATDILGTFLYRTFFGFQLQLGNPSMGATIAAVMFLIILAGVSLYLFGIQRRMRR 336 Query: 302 YE 303 Y+ Sbjct: 337 YQ 338 >SMc02872 [G] COG1175 ABC-type sugar transport systems, permease components Sme Sinorhizobium meliloti Length = 315 Score = 355 bits (911), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 174/303 (57%), Positives = 224/303 (73%), Gaps = 1/303 (0%) Query: 1 VKTARPWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDS 60 +K R WHI+ FL PA+++Y+ LPL +TLR FY + D G +FVGL N++ + D Sbjct: 13 IKRPRRWHILVFLLPALVVYTAVMILPLFETLRQSFYNTVD-GQLTFVGLGNFKVLFGDP 71 Query: 61 DWSTAFWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVI 120 W+ FWNA+ NN FF IHM +QNPIG+ LA + S+ LR YRT IFLPTLLS VI Sbjct: 72 RWAADFWNALKNNFVFFLIHMAVQNPIGIALAAMLSVPKLRFGAFYRTAIFLPTLLSFVI 131 Query: 121 IGFIWQLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIY 180 +GFIW+LI+SP+WGV L+ VGL F P+LG+ TAL +SLISVWQYIGIPMMLIY Sbjct: 132 VGFIWKLILSPIWGVAPYLLDTVGLRSLFGPWLGKPDTALIAVSLISVWQYIGIPMMLIY 191 Query: 181 AALLAVPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKG 240 AALL +P+EV EAA +G + FW+IKLPLI P +G+V+ILTFV NFNAFDLIY+V+G Sbjct: 192 AALLNIPDEVTEAAELDGVTGWSQFWKIKLPLILPAIGIVSILTFVGNFNAFDLIYTVQG 251 Query: 241 ALAGPNYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLT 300 ALAGP+ S+D+LGT YRTFFG+Q Q+G +MGA +A +MFL+ILAGV Y + +QR++ Sbjct: 252 ALAGPDKSTDILGTLLYRTFFGFQLQLGDRSMGATIAAIMFLIILAGVALYLFGIQRRMR 311 Query: 301 RYE 303 RY+ Sbjct: 312 RYQ 314 >mlr7001 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 317 Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 158/293 (53%), Gaps = 13/293 (4%) Query: 13 LAPAVIIYSMFSALPLLDTLRLGFYTSN--DAGVHSFVGLDNYRTILFDSDWSTAFWNAM 70 LAPAV+ Y++F+ P++D ++L F N +A H +VGLDNYR +L D FW A+ Sbjct: 36 LAPAVLAYAVFAFYPMIDVIQLSFMKWNGLNADKH-WVGLDNYRYVLHDD---PVFWVAL 91 Query: 71 WNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIWQLIIS 130 N + + + ++ IG LA + + + G R L ++P +++ + + +W+ + Sbjct: 92 KNTLIWTFLSVIFPPLIGFGLALGLN-QNIPGRSPLRALFYMPVIIAPIAVATMWRWMFD 150 Query: 131 PLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYAALLAVPEEV 190 P +G+ L++ G + +LG + AL+++ + VW+ G M+L A L V + + Sbjct: 151 PFFGLFNSLLSAAGWPNLIQDWLGDRNVALYSVFIAYVWEVAGFSMVLFLAGLQGVSQTL 210 Query: 191 LEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGALAGPNYSSD 250 +EAA +GA L++F + LP + PT+ +V IL+ + + AFD++Y + G GP S+ Sbjct: 211 VEAARIDGAGRLQLFRYVTLPALRPTITIVLILSLINSLKAFDIVYGMTG--GGPAQSTQ 268 Query: 251 LLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLTRYE 303 +L + Y Q+G G+A++ ++ L+ +A V Y ++ Y+ Sbjct: 269 MLAMWAYTQ----AMQLGDFGRGSAISVVLLLITVAIVIPYLRWTLKRQEAYQ 317 >BS_yurN [G] COG1175 ABC-type sugar transport systems, permease components Bsu Bacillus subtilis Length = 292 Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/279 (29%), Positives = 150/279 (53%), Gaps = 17/279 (6%) Query: 12 FLAPAVIIYSMFSALPLLDTLRLGFYT-SNDAGVHSFVGLDNYRTILFDSDWSTAFWNAM 70 FL PA +++ +F +P+ + + L + S+ + +F+GL NY + D F+ A+ Sbjct: 12 FLVPA-LVFLLFVYIPIFENVFLSLFQWSSFSPEKTFIGLKNYVELFHDP----VFYQAL 66 Query: 71 WNNVKFFCIHMLLQNPIGLLLATLFSLKGLRG-ARTYRTLIFLPTLLSVVIIGFIWQLII 129 NNV + I ++ Q GL+LA + K +R + +RT+ FLP ++S+ +I ++ I Sbjct: 67 TNNVLYAVISIVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIY 126 Query: 130 SPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYAALLAVPEE 189 +P G+ +L+ +GL +LG +STA+ ++ +S WQ +G ML ++ +P+E Sbjct: 127 NPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSVIFVSQWQSVGYIAMLYIVSIQKIPDE 186 Query: 190 VLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGALAGPNYSS 249 + EAA +GA ++ F+ I +P + ++T F F+ Y + G GP +S Sbjct: 187 LYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYILTG--GGPGKAS 244 Query: 250 DLLGTFFYRTFFGYQAQVGSPTMG--AAVATLMFLVILA 286 ++L TF Y++ F MG +A+AT++ ++ LA Sbjct: 245 EVLSTFLYKSAF------TKDMMGYASAIATVVLIITLA 277