BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0054.p (301 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZglpR [KG] COG1349 Transcriptional regulators of sugar metabolis... 199 6e-51 ECs4266 [KG] COG1349 Transcriptional regulators of sugar metabol... 199 6e-51 glpR [KG] COG1349 Transcriptional regulators of sugar metabolism... 199 7e-51 STM3523 [KG] COG1349 Transcriptional regulators of sugar metabol... 196 4e-50 YPO0120 [KG] COG1349 Transcriptional regulators of sugar metabol... 193 5e-49 >ZglpR [KG] COG1349 Transcriptional regulators of sugar metabolism EcZ Escherichia coli O157:H7 EDL933 Length = 252 Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 147/236 (62%), Gaps = 2/236 (0%) Query: 21 RHNEIIALFRQHGFLTMEALAEHFAVTTQTIRRDINALCDADILRRRHGGAELILSARNQ 80 RHN II L +Q G+++ E L EHF+V+ QTIRRD+N L + +++ R HGGA L S+ N Sbjct: 6 RHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPSSSVNT 65 Query: 81 PYDMRRINNLEQKAEIGAAVAALIPNSCSVLIGIGTTPEQVALALAKHDHLTVITNNLRA 140 P+ R+ E+K I VA IPN ++ I IGTTPE VA AL H +L ++TNNL Sbjct: 66 PWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVTNNLNV 125 Query: 141 ALALSTNQNNQVIVPGGTLRFPNPEILGNDADKLFRNFRADFGIYGVGGVDTDGTLLDFD 200 A L ++ ++I+ GG LR + I+G FR DFGI G+ G+D+DG+LL+FD Sbjct: 126 ANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFD 185 Query: 201 RMESSSRQALRESCRTQILVTDNSKFGRQAPVRGGHLSDPDILVTDSPLSPTLAAM 256 E +++A+ E+ R +LV D+SKFGR A V G +S D + TD+P P ++ M Sbjct: 186 YHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDTP--PPVSVM 239 >ECs4266 [KG] COG1349 Transcriptional regulators of sugar metabolism Ecs Escherichia coli O157:H7 Length = 252 Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 147/236 (62%), Gaps = 2/236 (0%) Query: 21 RHNEIIALFRQHGFLTMEALAEHFAVTTQTIRRDINALCDADILRRRHGGAELILSARNQ 80 RHN II L +Q G+++ E L EHF+V+ QTIRRD+N L + +++ R HGGA L S+ N Sbjct: 6 RHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPSSSVNT 65 Query: 81 PYDMRRINNLEQKAEIGAAVAALIPNSCSVLIGIGTTPEQVALALAKHDHLTVITNNLRA 140 P+ R+ E+K I VA IPN ++ I IGTTPE VA AL H +L ++TNNL Sbjct: 66 PWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVTNNLNV 125 Query: 141 ALALSTNQNNQVIVPGGTLRFPNPEILGNDADKLFRNFRADFGIYGVGGVDTDGTLLDFD 200 A L ++ ++I+ GG LR + I+G FR DFGI G+ G+D+DG+LL+FD Sbjct: 126 ANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFD 185 Query: 201 RMESSSRQALRESCRTQILVTDNSKFGRQAPVRGGHLSDPDILVTDSPLSPTLAAM 256 E +++A+ E+ R +LV D+SKFGR A V G +S D + TD+P P ++ M Sbjct: 186 YHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDTP--PPVSVM 239 >glpR [KG] COG1349 Transcriptional regulators of sugar metabolism Eco Escherichia coli K12 Length = 252 Score = 199 bits (506), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 147/236 (62%), Gaps = 2/236 (0%) Query: 21 RHNEIIALFRQHGFLTMEALAEHFAVTTQTIRRDINALCDADILRRRHGGAELILSARNQ 80 RHN II L +Q G+++ E L EHF+V+ QTIRRD+N L + +++ R HGGA L S+ N Sbjct: 6 RHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPSSSVNT 65 Query: 81 PYDMRRINNLEQKAEIGAAVAALIPNSCSVLIGIGTTPEQVALALAKHDHLTVITNNLRA 140 P+ R+ E+K I VA IPN ++ I IGTTPE VA AL H +L ++TNNL Sbjct: 66 PWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVTNNLNV 125 Query: 141 ALALSTNQNNQVIVPGGTLRFPNPEILGNDADKLFRNFRADFGIYGVGGVDTDGTLLDFD 200 A L ++ ++I+ GG LR + I+G FR DFGI G+ G+D+DG+LL+FD Sbjct: 126 ANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFD 185 Query: 201 RMESSSRQALRESCRTQILVTDNSKFGRQAPVRGGHLSDPDILVTDSPLSPTLAAM 256 E +++A+ E+ R +LV D+SKFGR A V G +S D + TD+P P ++ M Sbjct: 186 YHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAP--PPVSVM 239 >STM3523 [KG] COG1349 Transcriptional regulators of sugar metabolism Sty Salmonella typhimurium LT2 Length = 252 Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 148/240 (61%) Query: 21 RHNEIIALFRQHGFLTMEALAEHFAVTTQTIRRDINALCDADILRRRHGGAELILSARNQ 80 RH+ II L ++ G+++ E L EHF+V+ QTIRRD+N L + +++ R HGGA L S+ N Sbjct: 6 RHDAIIELVKKQGYVSTEELVEHFSVSPQTIRRDLNDLAEQNMILRHHGGAALPSSSVNT 65 Query: 81 PYDMRRINNLEQKAEIGAAVAALIPNSCSVLIGIGTTPEQVALALAKHDHLTVITNNLRA 140 P+ R+ E+K I VAA IPN ++ I IGTTPE VA AL H +L ++TNNL Sbjct: 66 PWHDRKATQTEEKERIARKVAAQIPNGSTLFIDIGTTPEAVAHALLGHSNLRIVTNNLNV 125 Query: 141 ALALSTNQNNQVIVPGGTLRFPNPEILGNDADKLFRNFRADFGIYGVGGVDTDGTLLDFD 200 A L ++ ++I+ GG LR + I+G FR DFGI G+ G+D+DG+LL+FD Sbjct: 126 ANTLMAKEDFRIILAGGELRSRDGGIIGEATQDFIAQFRLDFGILGISGIDSDGSLLEFD 185 Query: 201 RMESSSRQALRESCRTQILVTDNSKFGRQAPVRGGHLSDPDILVTDSPLSPTLAAMLAGN 260 E +++A+ E+ R +LV D+SKFGR A V G +S D + TD+ P + +L N Sbjct: 186 YHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDTLPPPGVMQVLTEN 245 >YPO0120 [KG] COG1349 Transcriptional regulators of sugar metabolism Ype Yersinia pestis Length = 252 Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 101/227 (44%), Positives = 143/227 (62%) Query: 21 RHNEIIALFRQHGFLTMEALAEHFAVTTQTIRRDINALCDADILRRRHGGAELILSARNQ 80 RH+ II L R G+++ E L EHFAV+ QTIRRD+N L D + + R HGGA L S+ N Sbjct: 6 RHDAIIELVRLQGYVSTEELVEHFAVSPQTIRRDLNELADQNKIHRHHGGAALPSSSVNA 65 Query: 81 PYDMRRINNLEQKAEIGAAVAALIPNSCSVLIGIGTTPEQVALALAKHDHLTVITNNLRA 140 Y+ R++ E+KA I VA+ IP+ ++ I IGTTPE VA AL H L V+TNNL Sbjct: 66 AYNDRKVMWSEEKARIAQRVASQIPDGATLFIDIGTTPEAVAHALMNHKGLRVVTNNLNV 125 Query: 141 ALALSTNQNNQVIVPGGTLRFPNPEILGNDADKLFRNFRADFGIYGVGGVDTDGTLLDFD 200 A L+ ++ ++I+ GG +R + I+G FR D+GI G+ G+D DG+LL+FD Sbjct: 126 ATLLTAKEDFRLILAGGEVRTRDGGIIGEATLDFISQFRLDYGILGISGIDMDGSLLEFD 185 Query: 201 RMESSSRQALRESCRTQILVTDNSKFGRQAPVRGGHLSDPDILVTDS 247 E +++A+ E+ R +LVTD+SKFGR A V G+++ D L TD Sbjct: 186 YHEVRTKRAIIENSRCVMLVTDHSKFGRNAMVNLGNMNLIDYLFTDQ 232