BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0041.p (290 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 347 3e-95 PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 280 3e-75 CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 120 4e-27 YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 114 2e-25 BH1210 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 108 1e-23 >RSp1508 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 298 Score = 347 bits (889), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 174/265 (65%), Positives = 212/265 (80%) Query: 25 VQRPLSAFEAIYRISWIRKTAILLVLALVWEIYGRWLDNSLLFPSFSETLHAFMSGISSG 84 +++PLS E +Y +W+RK AIL+ LAL WE RWLDN LL P+FS+T A +G++ G Sbjct: 33 IEKPLSMAERLYAQAWLRKLAILVALALAWEGGARWLDNPLLLPTFSDTARALWAGLADG 92 Query: 85 VLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISSRIGNDFLETLTSMFNPLPAIALLPLA 144 L R S+QTLL GY+LG+ L+ L L I SR+G DFLETLT+MFNPLPAIALLP+A Sbjct: 93 TLFARIGTSMQTLLAGYALGLALSCALVVLGIGSRLGQDFLETLTAMFNPLPAIALLPIA 152 Query: 145 LIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSVSATMRMVGQNYGLRRFALVRYILIPA 204 L+WFGLG GS+IFV+VHSV+WAV+LNTHAGF SVS T+RMVG+NYGL A + ILIPA Sbjct: 153 LVWFGLGNGSLIFVIVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMAYLTQILIPA 212 Query: 205 AFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTGGLGWYIFENRNQLETANVFSGLFFVI 264 AFPSILTGLKIGWAFAWRTLIA+ELVFGVSSG GGLGWYI+EN+N L+ VF+GL VI Sbjct: 213 AFPSILTGLKIGWAFAWRTLIASELVFGVSSGQGGLGWYIYENKNLLQIPEVFAGLLTVI 272 Query: 265 IIGLFVENMIFAKIEKRTIRRWGMQ 289 +IGL VEN++F +E RT++RWGMQ Sbjct: 273 LIGLLVENLVFRTLEARTVKRWGMQ 297 >PA2307 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 288 Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 169/290 (58%), Positives = 214/290 (73%), Gaps = 2/290 (0%) Query: 1 MTKNSTLFVRPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYGRW 60 M++ + + E+ +EP E + PLS + +++ SW+RK IL +LAL WE+ R Sbjct: 1 MSRVTRVREEYEVQLEPLLEVSLERRLPLS--QRLWQQSWLRKGLILALLALAWELAARV 58 Query: 61 LDNSLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISSRI 120 N LL P F +T A G++SG L +A +SL L GY LGI+LA +LT+LA+S+++ Sbjct: 59 QGNDLLLPGFLQTARALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQL 118 Query: 121 GNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSVSA 180 G D L TLT+MFNPLPAIALLPLAL+WFGLG S+IFVLVHSVLWA+ALNT+AGF VS Sbjct: 119 GRDLLGTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSE 178 Query: 181 TMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTGGL 240 T+RM G+NYGLR V IL+PAA PSIL GLKIGWAFAWRTLIAAELVFG SSG GGL Sbjct: 179 TLRMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWAFAWRTLIAAELVFGASSGKGGL 238 Query: 241 GWYIFENRNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 GWYIF+NRN+L T VF+GL V++IGL VEN++F IE+ T++RWG+Q Sbjct: 239 GWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVFGSIERLTVKRWGVQR 288 >CAC0108 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Cac Clostridium acetobutylicum Length = 265 Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 131/255 (51%), Gaps = 10/255 (3%) Query: 42 RKTAILLVLALVWE-IYGRWLD-----NSLLFPSFSETLHAFMSGISSGVLLQRAAVSLQ 95 R+ ++L +WE IY ++D + FPS E +A + L SL Sbjct: 13 RRVLFYIILIAIWELIYKVFVDILGVWKAYTFPSPGEVYNALAYLVKDNTLFIATGASLT 72 Query: 96 TLLIGYSLGILLAGLLTTLAISSRIGNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSI 155 L+IGY + + + L + I + ++ L L LP++ +P A++W+G+ SI Sbjct: 73 RLVIGYIIALFIGIALALVCIKYKYVDENLTPLMLGLQTLPSVCWIPFAILWYGIDERSI 132 Query: 156 IFVLVHSVLWAVALNTHAGFRSVSATMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKI 215 IFV V L+++A++T +G ++V+ + G R L ++IP+A P I++G++ Sbjct: 133 IFVTVVGSLFSIAISTISGVKNVNPIYVKAARTMGARGKNLYFDVVIPSALPEIISGMRQ 192 Query: 216 GWAFAWRTLIAAELVFGVSSGTGGLGWYIFENRNQLETANVFSGLFFVIIIGLFVENMIF 275 GW+FAWR L+A E++ S T GLG + R + + V + + +I GL + ++F Sbjct: 193 GWSFAWRALMAGEML----SATKGLGQVLTAGRELGDISQVMAVMIIIIAFGLIFDKLLF 248 Query: 276 AKIEKRTIRRWGMQH 290 K+EK + G++ Sbjct: 249 EKVEKNIRYKCGLEK 263 >YPO2287 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 273 Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 135/246 (54%), Gaps = 9/246 (3%) Query: 39 SWIRKTAILLVLALVWEIYGRWLDNSLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLL 98 WI+ T + +A+V RW D L + +++ ++ SG LL A S+ ++ Sbjct: 30 GWIQPTILPSPVAVV----VRWFDYFLPYEAYNPETSNWLMWSLSGELLHDAWASIYRVI 85 Query: 99 IGYSLGILLAGLLTTLAISSRIGNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFV 158 IG+ +G LLA L SS+IGND + L P+P IA +PLA++WFGLG F+ Sbjct: 86 IGFLIGALLALPLGLWVGSSKIGNDLMNPLIQFLRPIPPIAYIPLAMLWFGLGNPPAFFL 145 Query: 159 LVHSVLWAVALNTHAGFRSVSATMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWA 218 + + + +NT AG R+V + +N G + + R I++PAA P ILTG+++G Sbjct: 146 ISIGAFFPILINTIAGVRNVDGIYILAARNLGAGQATMFRRIILPAATPYILTGMRVGIG 205 Query: 219 FAWRTLIAAELVFGVSSGTGGLGWYIFENRNQLETANVFSGLFFVIIIGLFVENMIFAKI 278 A+ +I AE++ V+S G+G+ I E R + + V +G+F + +GL ++ + ++ Sbjct: 206 TAFICVIVAEMI-AVNS---GVGYRILEAREYMWSDKVIAGMFTIGFLGLVID-LCMDRL 260 Query: 279 EKRTIR 284 +R +R Sbjct: 261 NRRLLR 266 >BH1210 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bha Bacillus halodurans Length = 252 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 127/252 (50%), Gaps = 13/252 (5%) Query: 41 IRKTAILLVLALVWE-IYGRWLDNSLLFPS----FSETLHAFMSGISSGVLLQRAAVSLQ 95 +R+ L +WE +Y L + LFPS F E F +G+L SL Sbjct: 5 LRRLLFFAALFFIWELVYRLELFQTRLFPSPLLSFVELYKGFFE---TGILTVATFESLS 61 Query: 96 TLLIGYSLGILLAGLLTTLAISSRIGNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSI 155 + IG+++ +++ L L S+I ++ L +L +P+I LP+AL+ G +I Sbjct: 62 RIAIGFTIAVVVGSCLGILLALSKIADETLGSLVIALQSVPSIVWLPIALVVLQTGNTAI 121 Query: 156 IFVLVHSVLWAVALNTHAGFRSVSATMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKI 215 IF++V WA+ +N G ++V + + G R LV ++IPA+ PS LTG+++ Sbjct: 122 IFIIVLGGTWAMTMNMRMGIKNVQPLLIRAARTMGYRGAELVWKVMIPASIPSALTGMRL 181 Query: 216 GWAFAWRTLIAAELVFGVSSGTGGLGWYIFENRNQLETANVFSGLFFVIIIGLFVENMIF 275 WAF WR LIA EL+ G + + R+ V + + + ++GL VE +IF Sbjct: 182 AWAFGWRALIAGELLGRGGLGR-----TLLDARDFFNMELVIAIMMIIAVVGLIVEYLIF 236 Query: 276 AKIEKRTIRRWG 287 IE++ + RWG Sbjct: 237 NPIERKVLSRWG 248