BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0023.p         (91 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1504 [T] COG0589 Universal stress protein UspA and related nu...    80   2e-15
RSc0184 [T] COG0589 Universal stress protein UspA and related nu...    69   3e-12
RSc0179 [T] COG0589 Universal stress protein UspA and related nu...    67   1e-11
RSp1561 [T] COG0589 Universal stress protein UspA and related nu...    57   9e-09

>RSc1504 [T] COG0589 Universal stress protein UspA and related
           nucleotide-binding proteins Rso Ralstonia solanacearum
          Length = 151

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 59/87 (67%)

Query: 3   DVGQTILEQARSRIASAGLRSEIRLVEEPVALGDIPGAILKAAKDSKAELVVIGSHGRTG 62
           + G+  L  A +++ SAG+R   +L+E+P +LG +   I++ A  S A+L+V+G+HGR G
Sbjct: 62  EYGRETLAHAAAKLESAGVRHTTKLMEKPSSLGQVSSTIVEEANVSNADLIVLGTHGRRG 121

Query: 63  FRKLVLGSVAEKVMHQCPLPVWIIRGK 89
            R LV+GSVAE V+H+   PV ++R +
Sbjct: 122 LRHLVMGSVAESVVHKTNKPVLMVRSE 148


>RSc0184 [T] COG0589 Universal stress protein UspA and related
           nucleotide-binding proteins Rso Ralstonia solanacearum
          Length = 166

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 59/87 (67%)

Query: 1   VVDVGQTILEQARSRIASAGLRSEIRLVEEPVALGDIPGAILKAAKDSKAELVVIGSHGR 60
           +++ G+ I+  AR++   AG+R    +V++P+   DI  AI + A+D  A+++V+G+HGR
Sbjct: 60  LIEQGKRIVTDARAKAEKAGVRVRSVVVDDPIGSFDIGFAIEQTARDVGAQVIVLGTHGR 119

Query: 61  TGFRKLVLGSVAEKVMHQCPLPVWIIR 87
            GFR+L LGSVAE V  Q  LPV ++R
Sbjct: 120 RGFRRLFLGSVAESVARQSTLPVLLVR 146


>RSc0179 [T] COG0589 Universal stress protein UspA and related
           nucleotide-binding proteins Rso Ralstonia solanacearum
          Length = 151

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 57/89 (64%)

Query: 1   VVDVGQTILEQARSRIASAGLRSEIRLVEEPVALGDIPGAILKAAKDSKAELVVIGSHGR 60
           VV+ G+  L +  +++ +AG++   +L+E+ +  G I   I+  A ++  +L+V+G+HGR
Sbjct: 60  VVEFGRDTLAEVATKLEAAGVKHSTKLLEKSIVPGQISATIVAEANETGTDLIVLGTHGR 119

Query: 61  TGFRKLVLGSVAEKVMHQCPLPVWIIRGK 89
            G + LVLGSVAE V+ +   PV ++R +
Sbjct: 120 RGLKHLVLGSVAEGVVRKTNKPVLMVRSE 148


>RSp1561 [T] COG0589 Universal stress protein UspA and related
           nucleotide-binding proteins Rso Ralstonia solanacearum
          Length = 151

 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%)

Query: 2   VDVGQTILEQARSRIASAGLRSEIRLVEEPVALGDIPGAILKAAKDSKAELVVIGSHGRT 61
           +  G T+L    +R+   G+  +  L+E      D+ GA+ + A    A++VVIG+HGR 
Sbjct: 61  IQAGTTLLTDIETRLTKEGVPQQAALIETQGIGEDVAGALQREAVRWDADVVVIGTHGRR 120

Query: 62  GFRKLVLGSVAEKVMHQCPLPVWIIRG 88
           G    +LGSVAEK +    +PV ++RG
Sbjct: 121 GLAHAMLGSVAEKFIRLATMPVLLVRG 147