BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0016.p         (184 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr8412 [GEPR] COG0477 Permeases of the major facilitator superf...   128   9e-30
AGc2168 [GEPR] COG0477 Permeases of the major facilitator superf...   116   2e-26
SMc01779 [GEPR] COG0477 Permeases of the major facilitator super...   111   9e-25
PA1848 [GEPR] COG0477 Permeases of the major facilitator superfa...    99   4e-21
RSp0429 [GEPR] COG0477 Permeases of the major facilitator superf...    92   7e-19

>mlr8412 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 405

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 92/145 (63%)

Query: 14  APLAAVACHHGIDDGANIIQWHLVGMYAPSFFAGALIKRCGLGPVVLAGVALNLACALIA 73
           APLA V C    DD    I WH++ M+APSFF G+LI R G   +V  G+ L + CA +A
Sbjct: 244 APLAMVGCGLSEDDATLGISWHVMAMFAPSFFTGSLIHRFGAERIVAIGLILLIGCAAVA 303

Query: 74  MASTSLPAFYVALLCLGVGWNFMFVGGTTLLAQSYRPSERARAQGLSEFLRYAATALATL 133
           ++  +L  F+ +L+ LG+GWNF F+G T ++A SYRPSE+ + QG  +F+ + + A A+L
Sbjct: 304 LSGLALWQFWTSLILLGLGWNFGFIGATAMVAASYRPSEKGKVQGFHDFVLFGSVACASL 363

Query: 134 AAGPLLEHYGWSALNLAILPLLLIC 158
            +G +   +GW  LN  I P+ ++C
Sbjct: 364 LSGMVYNAWGWEMLNWIIFPVTVLC 388


>AGc2168 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 407

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%)

Query: 14  APLA-AVACHHGIDDGANIIQWHLVGMYAPSFFAGALIKRCGLGPVVLAGVALNLACALI 72
           APLA  V C    +     IQWH++ M+APSFF G LI R G   +V AG+ + +ACA++
Sbjct: 246 APLAMVVGCGFPTELATLGIQWHVLAMFAPSFFTGMLISRFGAEKIVAAGLIVLMACAIV 305

Query: 73  AMASTSLPAFYVALLCLGVGWNFMFVGGTTLLAQSYRPSERARAQGLSEFLRYAATALAT 132
           A     L  F+ AL+ LG+GWNF F+G T ++  SYRP E  + QG  + + +   AL++
Sbjct: 306 AHMGIELWNFWAALILLGLGWNFGFIGATAIITSSYRPHEADKVQGFHDIVLFGTVALSS 365

Query: 133 LAAGPLLEHYGWSALNLAILPL 154
            ++G +   +GWS +NL I P+
Sbjct: 366 FSSGKVFTAWGWSVMNLVIWPV 387


>SMc01779 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 408

 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 1/146 (0%)

Query: 14  APLA-AVACHHGIDDGANIIQWHLVGMYAPSFFAGALIKRCGLGPVVLAGVALNLACALI 72
           AP+A  V C    D     IQWH++ M+APSF  G LI R G   +V  G+ L +ACA +
Sbjct: 247 APVAMVVGCGFSSDLATLGIQWHVLAMFAPSFVTGWLISRFGAERIVACGLLLLMACAAV 306

Query: 73  AMASTSLPAFYVALLCLGVGWNFMFVGGTTLLAQSYRPSERARAQGLSEFLRYAATALAT 132
           A    +L  F+ AL  LG+GWNF F+G T ++AQSYRP E  + QG  + + ++A A ++
Sbjct: 307 AHLGVALWNFWGALSLLGLGWNFGFIGSTAIVAQSYRPHEADKVQGFHDIVLFSAVACSS 366

Query: 133 LAAGPLLEHYGWSALNLAILPLLLIC 158
            A+G +L  YGW  L+ A+ P+   C
Sbjct: 367 FASGKVLSGYGWDMLSAAVWPVAGFC 392


>PA1848 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
           Pseudomonas aeruginosa
          Length = 389

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 81/141 (57%)

Query: 13  AAPLAAVACHHGIDDGANIIQWHLVGMYAPSFFAGALIKRCGLGPVVLAGVALNLACALI 72
           A PLA   C   ++  + +IQWH++GM+ P+FFAG L+ R G   V L G  L  A A I
Sbjct: 229 ATPLAMSFCGLPLEQSSRVIQWHVLGMFLPAFFAGPLVDRIGNRRVALLGAFLLAASAGI 288

Query: 73  AMASTSLPAFYVALLCLGVGWNFMFVGGTTLLAQSYRPSERARAQGLSEFLRYAATALAT 132
           A+   S+  F ++ L LG GWN M + GTTLL + +  SER  AQGL E       AL +
Sbjct: 289 ALDGQSVTHFLLSSLALGSGWNLMLIAGTTLLGEGHAESERGAAQGLMEQGNSLVAALMS 348

Query: 133 LAAGPLLEHYGWSALNLAILP 153
             +G L+   GW+A+NL + P
Sbjct: 349 FGSGALITSLGWNAVNLLVWP 369


>RSp0429 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 399

 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 92/167 (55%)

Query: 13  AAPLAAVACHHGIDDGANIIQWHLVGMYAPSFFAGALIKRCGLGPVVLAGVALNLACALI 72
           +APLA   C        + I+ H+V MYAPSFF G LI R G   V LAG+AL    A+ 
Sbjct: 233 SAPLAMELCGISRAQANDGIEIHVVAMYAPSFFTGRLISRFGAPNVSLAGLALMALAAIT 292

Query: 73  AMASTSLPAFYVALLCLGVGWNFMFVGGTTLLAQSYRPSERARAQGLSEFLRYAATALAT 132
            M   ++  F+ AL+ LG+GWNF F+G + ++   + P+E  R Q + +F+ + A  + +
Sbjct: 293 GMTGLAVDHFWGALMLLGLGWNFGFLGASAMVLACHTPAEGPRVQSIYDFVVFGAMVVGS 352

Query: 133 LAAGPLLEHYGWSALNLAILPLLLICALVSVWWMLANAAAARNAAAN 179
            A+G LL  +GWS +   ILP +LI A  + W         + A+++
Sbjct: 353 FASGGLLTTFGWSLVCGLILPPVLIAAASAFWLRGKTPRTGQQASSD 399