BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0041.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2853 [S] COG2001 Uncharacterized protein conserved in bacteri...   143   1e-34
STM0119 [S] COG2001 Uncharacterized protein conserved in bacteri...    70   2e-12
yabB [S] COG2001 Uncharacterized protein conserved in bacteria E...    69   2e-12
ZyabB [S] COG2001 Uncharacterized protein conserved in bacteria ...    69   2e-12
ECs0085 [S] COG2001 Uncharacterized protein conserved in bacteri...    69   2e-12

>RSc2853 [S] COG2001 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 142

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 77/99 (77%)

Query: 1   LLFFPRPTWESHREQIAAWPMSARAWQRVFLGNASDVEIDSAGRILIAPELRAAVGLERD 60
           L+ FPRP WE  RE+IAA PM A  W+R+FLG+A+DVE+D+AGR+LI PELR A  LERD
Sbjct: 44  LMLFPRPEWERFRERIAALPMEAHWWKRIFLGSAADVELDTAGRVLITPELRLAATLERD 103

Query: 61  VMLLGMGSHFEIWDAAKLAENESEAVAAGMPDVLSNFSF 99
           VMLLGMGSHFEIWDAA     E  A+A GMPD L NFSF
Sbjct: 104 VMLLGMGSHFEIWDAATYTAKEQAAMAQGMPDALKNFSF 142


>STM0119 [S] COG2001 Uncharacterized protein conserved in bacteria Sty
           Salmonella typhimurium LT2
          Length = 152

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 1   LLFFPRPTWESHREQIAAW----PMSARAWQRVFLGNASDVEIDSAGRILIAPELRAAVG 56
           LL +P P WE   ++++      P+  R  QR+ LG+AS+ ++D AGR+LIAP LR   G
Sbjct: 45  LLLYPLPEWEIIEQKLSRLSSMNPVERRV-QRLLLGHASECQMDGAGRLLIAPVLRQHAG 103

Query: 57  LERDVMLLGMGSHFEIWDAAKLAENESEAVAA 88
           L ++VML+G  + FE+WD     +   E + A
Sbjct: 104 LTKEVMLVGQFNKFELWDETTWYQQVKEDIDA 135


>yabB [S] COG2001 Uncharacterized protein conserved in bacteria Eco
           Escherichia coli K12
          Length = 152

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 1   LLFFPRPTWESHREQIAAW----PMSARAWQRVFLGNASDVEIDSAGRILIAPELRAAVG 56
           LL +P P WE   ++++      P+  R  QR+ LG+AS+ ++D AGR+LIAP LR   G
Sbjct: 45  LLLYPLPEWEIIEQKLSRLSSMNPVERRV-QRLLLGHASECQMDGAGRLLIAPVLRQHAG 103

Query: 57  LERDVMLLGMGSHFEIWDAAKLAENESEAVAA 88
           L ++VML+G  + FE+WD     +   E + A
Sbjct: 104 LTKEVMLVGQFNKFELWDETTWHQQVKEDIDA 135


>ZyabB [S] COG2001 Uncharacterized protein conserved in bacteria EcZ
           Escherichia coli O157:H7 EDL933
          Length = 152

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 1   LLFFPRPTWESHREQIAAW----PMSARAWQRVFLGNASDVEIDSAGRILIAPELRAAVG 56
           LL +P P WE   ++++      P+  R  QR+ LG+AS+ ++D AGR+LIAP LR   G
Sbjct: 45  LLLYPLPEWEIIEQKLSRLSSMNPVERRV-QRLLLGHASECQMDGAGRLLIAPVLRQHAG 103

Query: 57  LERDVMLLGMGSHFEIWDAAKLAENESEAVAA 88
           L ++VML+G  + FE+WD     +   E + A
Sbjct: 104 LTKEVMLVGQFNKFELWDETTWHQQVKEDIDA 135


>ECs0085 [S] COG2001 Uncharacterized protein conserved in bacteria Ecs
           Escherichia coli O157:H7
          Length = 152

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 1   LLFFPRPTWESHREQIAAW----PMSARAWQRVFLGNASDVEIDSAGRILIAPELRAAVG 56
           LL +P P WE   ++++      P+  R  QR+ LG+AS+ ++D AGR+LIAP LR   G
Sbjct: 45  LLLYPLPEWEIIEQKLSRLSSMNPVERRV-QRLLLGHASECQMDGAGRLLIAPVLRQHAG 103

Query: 57  LERDVMLLGMGSHFEIWDAAKLAENESEAVAA 88
           L ++VML+G  + FE+WD     +   E + A
Sbjct: 104 LTKEVMLVGQFNKFELWDETTWHQQVKEDIDA 135