BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0014.p         (243 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3360 [S] COG4322 Uncharacterized protein conserved in bacteri...    87   4e-17

>RSc3360 [S] COG4322 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 317

 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 88/177 (49%), Gaps = 19/177 (10%)

Query: 81  GEAVQR----IGTYWQSVGKSFTGADTQQ------AWSAAFISYLMQAAGISSDDFLASD 130
           GEA  R       YW  VGK  T    QQ      AWSA FIS++M+ AG+ +D FL   
Sbjct: 146 GEATTRGCVLAKRYWGIVGKEPT---CQQLTTGGWAWSAVFISWIMRKAGLQNDQFLTGA 202

Query: 131 VHFNYLTYLKARQSLPAPLFVLRPAATEPIAPGDLICAPRDSNQ-AATLDDIRPGL-PGH 188
            H  Y+T  +      A   + R  A     PGDLIC+ R +++  +   +IR G+ P H
Sbjct: 203 THAEYVTDARDHLLRHAAFTLERTPAVP--RPGDLICSARGADRFMSDPAEIRSGMTPMH 260

Query: 189 CDLVYEIHPGRGWAGVIGGNVFNSVSESLIPIDANARLLPLARR--PWFVVAKNLMP 243
           CDLV E+ P R     IGGNV  S S S+  ++   +L P       WFV+ +N +P
Sbjct: 261 CDLVVEVDPLRHEVKSIGGNVQQSASMSITELNDANQLDPYTNSVMQWFVILRNQLP 317