BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0001.p (226 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2990 [OC] COG4232 Thiol Rso Ralstonia solanacearum 206 4e-53 STM4323 [OC] COG4232 Thiol Sty Salmonella typhimurium LT2 151 1e-36 ZdsbD [OC] COG4232 Thiol EcZ Escherichia coli O157:H7 EDL933 147 1e-35 ECs5117 [OC] COG4232 Thiol Ecs Escherichia coli O157:H7 147 1e-35 dsbD [OC] COG4232 Thiol Eco Escherichia coli K12 147 2e-35 >RSc2990 [OC] COG4232 Thiol Rso Ralstonia solanacearum Length = 608 Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 112/227 (49%), Positives = 141/227 (62%), Gaps = 15/227 (6%) Query: 10 RAGGWMESVKRFFGVLMLATALWMVSPVIPAWAFVAGWAALGIAYGAYLLW-------SK 62 RAG W+ K FG ++L ALW+V PV+PAW + WA L IA +L + Sbjct: 371 RAGYWLVVTKAIFGFILLGVALWIVQPVLPAWLAMVAWAVLLIAAAVFLRTFDSLPADAG 430 Query: 63 PGHWAARACGLAFAALGVLQLVSVATGGRDPLAPLSHLGGGKPAAHTD-----FVRVRSV 117 P + G+ A G +QLV VA GGRDPL PL+ + A D F RV+SV Sbjct: 431 PLPRLGKVVGVVLALAGAVQLVGVAAGGRDPLQPLAGVMRASAGAQPDARGVVFQRVKSV 490 Query: 118 AELDAAL--AQTGGKPALLDFYADWCVSCKEMEKFTFTDPRVREKFARMVLLQIDVTANN 175 +E+D A+ A G+P +LDFYADWCVSCKEME+ TFTD RVR A +VLLQ DVTA+ Sbjct: 491 SEVDEAVRAATATGRPVMLDFYADWCVSCKEMERLTFTDARVRAALADVVLLQADVTADG 550 Query: 176 ADDKAMLKRFQLFGPPGIILFDGQGRELAGKRVIGYQNAEQFLQSLQ 222 ADD+A+LKRF LFGPP I FD QG + A RV+G++ AE FL SL+ Sbjct: 551 ADDRALLKRFSLFGPPATIFFDAQGNQ-APVRVVGFERAETFLASLR 596 >STM4323 [OC] COG4232 Thiol Sty Salmonella typhimurium LT2 Length = 567 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 126/218 (57%), Gaps = 15/218 (6%) Query: 5 KRFXGRAGGWMESVKRFFGVLMLATALWMVSPVI-PAWAFVAGWAALGIAYGAYLLWSKP 63 R ++G WM VK FG ++LA ++++ +I AW W+ LG+A+ W+ Sbjct: 351 NRLLPKSGPWMAHVKTAFGFVILALPVFLLERIIGEAWGLRL-WSLLGVAFFG---WAFI 406 Query: 64 GHWAARACGLAFAALGVLQLVSVATGGRDPLAPLSHLGGGKPAA----HTDFVRVRSVAE 119 AR A + ++Q++ +A + PL G P+A H +F + +V E Sbjct: 407 TSLQARR-----AWMRIVQIILLA-AALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDE 460 Query: 120 LDAALAQTGGKPALLDFYADWCVSCKEMEKFTFTDPRVREKFARMVLLQIDVTANNADDK 179 L+ ALAQ GKP +LDFYADWCV+CKE EK+TF+DPRV++ VLLQ +VTANNA D Sbjct: 461 LNQALAQAKGKPVMLDFYADWCVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDV 520 Query: 180 AMLKRFQLFGPPGIILFDGQGRELAGKRVIGYQNAEQF 217 A+LK Q+ G P I+ F+ QG+E RV G+ +A F Sbjct: 521 ALLKHLQVLGLPTILFFNTQGQEQPQSRVTGFMDAATF 558 >ZdsbD [OC] COG4232 Thiol EcZ Escherichia coli O157:H7 EDL933 Length = 565 Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 16/219 (7%) Query: 5 KRFXGRAGGWMESVKRFFGVLMLATALWMVSPVIPAWAFVAGWAALGIAYGAYL----LW 60 R ++G WME VK FG ++LA ++++ VI + W+ALG+A+ + L Sbjct: 348 NRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQ 407 Query: 61 SKPGHW--AARACGLAFAALGVLQLVSVATGGRDPLAPLSHLGGGKPAAHTDFVRVRSVA 118 +K G W + LA A + V L A G +H + H +F ++++V Sbjct: 408 AKRG-WMRVVQIILLAAALVSVRPLQDWAFGA-------TH--TAQTQTHLNFTQIKTVD 457 Query: 119 ELDAALAQTGGKPALLDFYADWCVSCKEMEKFTFTDPRVREKFARMVLLQIDVTANNADD 178 EL+ AL + GKP +LD YADWCV+CKE EK+TF+DP+V++ A VLLQ +VTAN+A D Sbjct: 458 ELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQD 517 Query: 179 KAMLKRFQLFGPPGIILFDGQGRELAGKRVIGYQNAEQF 217 A+LK + G P I+ FDGQG+E RV G+ +AE F Sbjct: 518 VALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETF 556 >ECs5117 [OC] COG4232 Thiol Ecs Escherichia coli O157:H7 Length = 565 Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 16/219 (7%) Query: 5 KRFXGRAGGWMESVKRFFGVLMLATALWMVSPVIPAWAFVAGWAALGIAYGAYL----LW 60 R ++G WME VK FG ++LA ++++ VI + W+ALG+A+ + L Sbjct: 348 NRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQ 407 Query: 61 SKPGHW--AARACGLAFAALGVLQLVSVATGGRDPLAPLSHLGGGKPAAHTDFVRVRSVA 118 +K G W + LA A + V L A G +H + H +F ++++V Sbjct: 408 AKRG-WMRVVQIILLAAALVSVRPLQDWAFGA-------TH--TAQTQTHLNFTQIKTVD 457 Query: 119 ELDAALAQTGGKPALLDFYADWCVSCKEMEKFTFTDPRVREKFARMVLLQIDVTANNADD 178 EL+ AL + GKP +LD YADWCV+CKE EK+TF+DP+V++ A VLLQ +VTAN+A D Sbjct: 458 ELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQD 517 Query: 179 KAMLKRFQLFGPPGIILFDGQGRELAGKRVIGYQNAEQF 217 A+LK + G P I+ FDGQG+E RV G+ +AE F Sbjct: 518 VALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETF 556 >dsbD [OC] COG4232 Thiol Eco Escherichia coli K12 Length = 565 Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 16/219 (7%) Query: 5 KRFXGRAGGWMESVKRFFGVLMLATALWMVSPVIPAWAFVAGWAALGIAYGAYL----LW 60 R ++G WME VK FG ++LA ++++ VI + W+ALG+A+ + L Sbjct: 348 NRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQ 407 Query: 61 SKPGHWA--ARACGLAFAALGVLQLVSVATGGRDPLAPLSHLGGGKPAAHTDFVRVRSVA 118 +K G W + LA A + V L A G +H + H +F ++++V Sbjct: 408 AKRG-WMRIVQIILLAAALVSVRPLQDWAFGA-------TH--TAQTQTHLNFTQIKTVD 457 Query: 119 ELDAALAQTGGKPALLDFYADWCVSCKEMEKFTFTDPRVREKFARMVLLQIDVTANNADD 178 EL+ AL + GKP +LD YADWCV+CKE EK+TF+DP+V++ A VLLQ +VTAN+A D Sbjct: 458 ELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQD 517 Query: 179 KAMLKRFQLFGPPGIILFDGQGRELAGKRVIGYQNAEQF 217 A+LK + G P I+ FDGQG+E RV G+ +AE F Sbjct: 518 VALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETF 556