BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0446.p         (63 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2834 [K] COG0583 Transcriptional regulator Pae Pseudomonas aer...    67   1e-11
mll1141 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ...    65   3e-11
SMc02893 [K] COG0583 Transcriptional regulator Sme Sinorhizobium...    60   2e-09
mll4435 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ...    59   2e-09

>PA2834 [K] COG0583 Transcriptional regulator Pae Pseudomonas aeruginosa
          Length = 319

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 18 EGSVVGAAKRLHLSAPAMSRRLANLRNAVGDPLFVPAGRGLVPT 61
          EGSVVGAA+R+HLS PAMSR L+ +R AVGDP+ V AGR LVPT
Sbjct: 27 EGSVVGAARRMHLSPPAMSRTLSRIREAVGDPIMVRAGRKLVPT 70


>mll1141 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti
          Length = 296

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 41/61 (67%)

Query: 1  MRVLDFNMVLDLEALLREGSVVGAAKRLHLSAPAMSRRLANLRNAVGDPLFVPAGRGLVP 60
          M   D N++  L+ LL EGSV  AA+RL LS  AMSR LA LR A GDPL V AGRGLV 
Sbjct: 1  MTTPDLNLLFALDVLLAEGSVARAARRLRLSPSAMSRTLARLREATGDPLLVRAGRGLVA 60

Query: 61 T 61
          T
Sbjct: 61 T 61


>SMc02893 [K] COG0583 Transcriptional regulator Sme Sinorhizobium meliloti
          Length = 308

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 38/57 (66%)

Query: 5  DFNMVLDLEALLREGSVVGAAKRLHLSAPAMSRRLANLRNAVGDPLFVPAGRGLVPT 61
          + N+++ L+ LL EGSV  AAKRL LS  AMSR L  LR   GDPL V  GRGLV T
Sbjct: 5  NLNLLVTLDVLLAEGSVARAAKRLRLSPSAMSRALQRLRETTGDPLLVRTGRGLVAT 61


>mll4435 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti
          Length = 304

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 4  LDFNMVLDLEALLREGSVVGAAKRLHLSAPAMSRRLANLRNAVGDPLFVPA--GRGLVPT 61
          +D N+++ L+ LL E +V  AA+RLH+S PA+S +L  LR+   DPL VPA  GRG+ PT
Sbjct: 6  VDLNLLVSLDVLLEECNVTRAAQRLHVSQPALSAQLGRLRHLFDDPLLVPAIVGRGMTPT 65