BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0420.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0078 [GEPR] COG0477 Permeases of the major facilitator superf...    72   3e-13

>RSp0078 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 399

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 50/74 (67%)

Query: 38  FDLGVQATLVAHQTIVYSIEPGARSRLNAVLFVGMFVGMAAGAALGSLLLAQWGWIGVVG 97
           FD+GVQA LV+HQTI+Y++ P ARSR+NAV    MF+GM+AGA   SL  +   W G++ 
Sbjct: 317 FDVGVQAALVSHQTIIYALAPEARSRINAVFMTIMFIGMSAGAYGASLAWSYAHWTGLMA 376

Query: 98  LATVASLSALLVRL 111
             T AS   L +RL
Sbjct: 377 FCTAASSIGLGLRL 390