BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0337.p (392 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3041 [J] COG0050 GTPases - translation elongation factors Rso... 730 0.0 RSc3021 [J] COG0050 GTPases - translation elongation factors Rso... 730 0.0 NMB0139 [J] COG0050 GTPases - translation elongation factors Nme... 643 0.0 RC1008 [J] COG0050 GTPases - translation elongation factors Rco ... 639 0.0 NMB0124 [J] COG0050 GTPases - translation elongation factors Nme... 637 0.0 >RSc3041 [J] COG0050 GTPases - translation elongation factors Rso Ralstonia solanacearum Length = 396 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/388 (90%), Positives = 368/388 (94%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFERTKPHVNVGTIGHVDHGKTTLTAAIATVLS KFGGEAK YD+IDAAPEEKARG Sbjct: 1 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSSKFGGEAKKYDEIDAAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINTAH+EYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTAHIEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVFLNK DMVDD ELLELVEMEVRELL+KY+FPGDD PIIKGSAKLALE Sbjct: 121 LLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD G LGE AIM LA+ALD+YIPTPERAVDG FL+PVEDVFSISGRGTVVTGR+ERGI+K Sbjct: 181 GDKGELGEVAIMNLADALDSYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGIIK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVGI+ TQ T CTGVEMFRKLLDQGQAGDNVG+LLRGTKREDVERGQVL KPGS Sbjct: 241 VGEEIEIVGIKATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLCKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPH HFTGE+Y+LSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHTHFTGEVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGC 388 ITV LI PIAMEEGLRFAIREGGRTVG Sbjct: 361 ITVKLIAPIAMEEGLRFAIREGGRTVGA 388 >RSc3021 [J] COG0050 GTPases - translation elongation factors Rso Ralstonia solanacearum Length = 396 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/388 (90%), Positives = 368/388 (94%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFERTKPHVNVGTIGHVDHGKTTLTAAIATVLS KFGGEAK YD+IDAAPEEKARG Sbjct: 1 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSSKFGGEAKKYDEIDAAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINTAH+EYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTAHIEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVFLNK DMVDD ELLELVEMEVRELL+KY+FPGDD PIIKGSAKLALE Sbjct: 121 LLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD G LGE AIM LA+ALD+YIPTPERAVDG FL+PVEDVFSISGRGTVVTGR+ERGI+K Sbjct: 181 GDKGELGEVAIMNLADALDSYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGIIK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVGI+ TQ T CTGVEMFRKLLDQGQAGDNVG+LLRGTKREDVERGQVL KPGS Sbjct: 241 VGEEIEIVGIKATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLCKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPH HFTGE+Y+LSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHTHFTGEVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGC 388 ITV LI PIAMEEGLRFAIREGGRTVG Sbjct: 361 ITVKLIAPIAMEEGLRFAIREGGRTVGA 388 >NMB0139 [J] COG0050 GTPases - translation elongation factors Nme Neisseria meningitidis MC58 Length = 394 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/388 (81%), Positives = 348/388 (89%), Gaps = 2/388 (0%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFER+KPHVNVGTIGHVDHGKTTLTAA+ T+LSKKFGG AKAYDQID APEEKARG Sbjct: 1 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILSKKFGGAAKAYDQIDNAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINT+HVEYET RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVF+NK DMVDD ELLELVEME+R+LL+ Y+FPGDD PI++GSA ALE Sbjct: 121 LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD E+ I LA ALD+YIPTPERAVD FLLP+EDVFSISGRGTVVTGRVERGI+ Sbjct: 181 GDAAY--EEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIH 238 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VG+ ++IVG+++TQ T CTGVEMFRKLLD+GQAGDNVGVLLRGTKREDVERGQVLAKPG+ Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGT 298 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 I PH F E+YVLSK+EGGRHTPFF NYRPQFYFRTTDVTG++ L + EMVMPG+NV+ Sbjct: 299 ITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVT 358 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGC 388 ITV LI PIAMEEGLRFAIREGGRTVG Sbjct: 359 ITVELIAPIAMEEGLRFAIREGGRTVGA 386 >RC1008 [J] COG0050 GTPases - translation elongation factors Rco Rickettsia conorii Length = 394 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/388 (79%), Positives = 344/388 (88%), Gaps = 2/388 (0%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFERTKPHVN+GTIGHVDHGKT+LTAAI VL+K G +A AYDQIDAAPEEK RG Sbjct: 1 MAKAKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITI+TAHVEYET NRHYAHVDCPGHADYVKNMITGAAQMDGAILV SAADGPMPQTREHI Sbjct: 61 ITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL++QVGVP ++VFLNK DMVDD +LLELVEMEVRELL+KY FPGD++PIIKGSA ALE Sbjct: 121 LLAKQVGVPAMVVFLNKIDMVDDPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 G P GE+AI L +A+D+YIP P RA D FL+P+EDVFSISGRGTVVTGRVE GI+K Sbjct: 181 GK--PEGEKAINELMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIK 238 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVG++DTQ T CTGVEMFRKLLD+GQAGDNVG+LLRGTKRE+VERGQVLAKPGS Sbjct: 239 VGEEIEIVGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGS 298 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPH F E+YVLSK+EGGRHTPF N+YRPQFYFRTTDVTG+I+L DK+MVMPGDN + Sbjct: 299 IKPHDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLSADKQMVMPGDNAT 358 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGC 388 TV LI PIAM+EGL+F+IREGGRTVG Sbjct: 359 FTVELIKPIAMQEGLKFSIREGGRTVGA 386 >NMB0124 [J] COG0050 GTPases - translation elongation factors Nme Neisseria meningitidis MC58 Length = 394 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/388 (81%), Positives = 348/388 (89%), Gaps = 2/388 (0%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFER+KPHVNVGTIGHVDHGKTTLTAA+ T+L+KKFGG AKAYDQID APEEKARG Sbjct: 1 MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINT+HVEYET RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVF+NK DMVDD ELLELVEME+R+LL+ Y+FPGDD PI++GSA ALE Sbjct: 121 LLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALKALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD E+ I LA ALD+YIPTPERAVD FLLP+EDVFSISGRGTVVTGRVERGI+ Sbjct: 181 GDAAY--EEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIH 238 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VG+ ++IVG+++TQ T CTGVEMFRKLLD+GQAGDNVGVLLRGTKREDVERGQVLAKPG+ Sbjct: 239 VGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGT 298 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 I PH F E+YVLSK+EGGRHTPFF NYRPQFYFRTTDVTG++ L + EMVMPG+NV+ Sbjct: 299 ITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVT 358 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGC 388 ITV LI PIAMEEGLRFAIREGGRTVG Sbjct: 359 ITVELIAPIAMEEGLRFAIREGGRTVGA 386