BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0329.p (1359 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3034 [K] COG0085 DNA-directed RNA polymerase, beta subunit/14... 2360 0.0 NMA0142 [K] COG0085 DNA-directed RNA polymerase, beta subunit/14... 2092 0.0 NMB0132 [K] COG0085 DNA-directed RNA polymerase, beta subunit/14... 2092 0.0 PA4270 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140... 1873 0.0 XF2633 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140... 1828 0.0 >RSc3034 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit Rso Ralstonia solanacearum Length = 1368 Score = 2360 bits (6116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1138/1347 (84%), Positives = 1235/1347 (91%), Gaps = 4/1347 (0%) Query: 1 MHYSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQTFLQTDKTTSQRKNEGLQSAFTSI 60 M YSFTEKKRIRKSFAKRA VH VPFLLATQI+SY FLQ + +QRK+EGLQ+AF +I Sbjct: 1 MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIQSYAQFLQEHASVAQRKSEGLQAAFNAI 60 Query: 61 FPIVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVIK 120 FPIVSHNG AR+EF+SY L PPFDVKECQQRGLTF S LRAKVRL+I D+E+PTK +K Sbjct: 61 FPIVSHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTK--VK 118 Query: 121 EMKEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR 180 E+KEQEVYMGE+PLMT+TGSFVINGTERVIVSQLHRSPGVFFEHD+GKTHSSGKLLFSAR Sbjct: 119 EIKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR 178 Query: 181 IIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFTLHAE 240 IIPYRGSWLDFEFDPKDIL+FRVDRRRKMPVTILLK+IG+T EQILA+FFVFDNFTL ++ Sbjct: 179 IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLKSD 238 Query: 241 GAEMEFVAERLRGEVARFDILDKSGKPLVAKDKRINAKHVRDIEAAGIKQISVPEDYLLG 300 GA MEFV ERLRGEVARFDI DK+GK +V KDKRINAKH+RD++AAG K ISVPEDYLLG Sbjct: 239 GALMEFVPERLRGEVARFDISDKNGKVVVEKDKRINAKHIRDLDAAGTKLISVPEDYLLG 298 Query: 301 RVLAKNIVDGDTGEVIASANDELTEELLARLREADIDAVQTLYTNDLDQGGYISQTLRTD 360 RVLAKNIVD DTGEV+A+ANDELTE +L +LR+A + +QTLYTNDLDQG Y+SQTLRTD Sbjct: 299 RVLAKNIVDPDTGEVLANANDELTEGVLEKLRDAGVKEIQTLYTNDLDQGPYMSQTLRTD 358 Query: 361 DTADQTAARVAIYRMMRPGEPPTEDSVEALFNGLFYSEDRYDLSAVGRMKFNRRIGRDEL 420 DT DQTAAR+AIYRMMRPGEPPTED+VEALF LFYSED YDLS VGRMK N R+ R E Sbjct: 359 DTVDQTAARIAIYRMMRPGEPPTEDAVEALFQRLFYSEDSYDLSRVGRMKVNSRLNRSEG 418 Query: 421 TGAMTLSNEDILAVIKILVELRNGRGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA 480 TG M L+++DIL IK+LV LRNG+GEVDDIDHLGNRRVRCVGELAENQFRAGL RVERA Sbjct: 419 TGPMVLTDDDILDTIKLLVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERA 478 Query: 481 VKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG 540 VKERLGQAE +NLMPHDLINSKPIS+AIREFFGSSQLSQFMDQTNPLSE+THKRR+SALG Sbjct: 479 VKERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALG 538 Query: 541 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKV 600 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYA+LN+YGFLETPYRKV Sbjct: 539 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQLNDYGFLETPYRKV 598 Query: 601 EGSKVTNQIDYLSAIEEGRYIIAQANATIDASLKLSDELVSAREAGE--TILVSPERVQY 658 E SK+T+Q+DYLSAIEEG+Y++AQANAT+D L DELVSARE E T +V+P+RVQY Sbjct: 599 ENSKLTDQVDYLSAIEEGKYVVAQANATVDKDGNLVDELVSAREGSERETRMVTPDRVQY 658 Query: 659 MDVAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGIERTVAVDS 718 +DVAP Q+VS AASL+PFLEHDDANRALMGANMQRQAVPCLR +KPLVGTG+ERTVAVDS Sbjct: 659 IDVAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRADKPLVGTGVERTVAVDS 718 Query: 719 GTTVQALRGGIVDYVDAGRVVIRVNDEEAQAGEVGVDIYNLIKYTRSNQNTNINQRPIVK 778 GT VQA RGG+VDYVDA RVVIRVND+EA AGEVGVDIYNLIKYTRSNQNTNINQRP+VK Sbjct: 719 GTAVQATRGGLVDYVDANRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVK 778 Query: 779 VGDRVAKHDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIH 838 VGD VA+ DVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISE+VVA+DRYTSIH Sbjct: 779 VGDIVARGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIH 838 Query: 839 IEELSVVARDTKLGAEEITRDISNLAENQLARLDESGITYIGAEVEAGDTLVGKVTPKGE 898 IEELSVVARDTKLG EEITRDISNLAE QLARLDESGITYIGAEVEAGD +VGKVTPKGE Sbjct: 839 IEELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVMVGKVTPKGE 898 Query: 899 TQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFTREGIQRDKRAQQIIDDE 958 TQLTPEEKLLRAIFGEKASDVKDTSLRVPSGM GTVIDVQVFTREG+ RDKRAQ IID+E Sbjct: 899 TQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGVTRDKRAQSIIDEE 958 Query: 959 LKRYRLDLNDQLRIVEGDAFQRLEKMLIGKVANGGPKKLSKGTKLDKAYLDDLDKYHWFD 1018 LKRYRLDLNDQLRIVEGDAFQRLE++L+GKV NGGPKKL+KGT L K YL DLDK+HWFD Sbjct: 959 LKRYRLDLNDQLRIVEGDAFQRLERLLVGKVVNGGPKKLAKGTALTKEYLADLDKWHWFD 1018 Query: 1019 IRPADDDMATALEAIKESIAEKRHQFDLAFEEKRKKLTQGDELPPGVQKMVKVYLAVKRR 1078 IRP+DDD+AT LEA+KE+I +KRH FDLAFEEKRKKLTQGDELPPGV KMVKVYLAVKRR Sbjct: 1019 IRPSDDDVATQLEAVKEAIEQKRHDFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRR 1078 Query: 1079 LQPGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGW 1138 LQPGDKMAGRHGNKGVVS+I PIEDMP+MADGTPADIVLNPLGVPSRMNVGQ+LE HLGW Sbjct: 1079 LQPGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGW 1138 Query: 1139 AAKGLGLRIGEMLTAQVKIAELRKFLTTIYNESGKKEALDEFSDQEILELAANLKKGVPF 1198 AA+GLG RIG ML AQ K AE+RK L IYNESGK E LD SD E+LELA NLKKGVPF Sbjct: 1139 AARGLGERIGNMLKAQAKAAEMRKLLGQIYNESGKVEDLDSLSDAEVLELAENLKKGVPF 1198 Query: 1199 ATPVFDGAHEDETRRMLDLAYPDHIAKQLGMTPSKNQVTMYDGRTGEAFERSVTVGYMHY 1258 ATPVFDGAHEDE RRMLDLAYP+ IAK+ G+T SK QVT++DGRTGEAFER VT+G MH Sbjct: 1199 ATPVFDGAHEDEIRRMLDLAYPEDIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHM 1258 Query: 1259 LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLT 1318 LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLT Sbjct: 1259 LKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLT 1318 Query: 1319 VKSDDVNGRTKVYENLVKGDHVIDAGM 1345 VKSDDVNGRTKVYEN+VKG+H IDAGM Sbjct: 1319 VKSDDVNGRTKVYENIVKGEHSIDAGM 1345 >NMA0142 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit NmA Neisseria meningitidis Z2491 Length = 1392 Score = 2092 bits (5420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1013/1370 (73%), Positives = 1159/1370 (84%), Gaps = 26/1370 (1%) Query: 1 MHYSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQTFLQTDKTTSQRKNEGLQSAFTSI 60 M YSFTEKKRIRKSFAKR NV VPFLLATQI+SY FLQ + +R ++GLQ+AF SI Sbjct: 1 MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSI 60 Query: 61 FPIVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVIK 120 FPIVSHNG+ARLEF+ Y LG P FD+ ECQ RG+T+A+PLRA++RLVILDKE+ +KP +K Sbjct: 61 FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEA-SKPTVK 119 Query: 121 EMKEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR 180 E++E EVYMGE+PLMT +GSFVINGTERVIVSQLHRSPGVFFEHD+GKTHSSGKLLFSAR Sbjct: 120 EVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR 179 Query: 181 IIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFTLHAE 240 IIPYRGSWLDFEFDPKD+L+FR+DRRRKMPVTILLKA+G +EQIL F+ + F L + Sbjct: 180 IIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSN 239 Query: 241 GAEMEFVAERLRGEVARFDILDKSGKPLVAKDKRINAKHVRDIEAAGIKQISVPEDYLLG 300 G + + VA RL+GE A+ DILDK G LVAK KRI AK++RDI AG+ ++ V + LLG Sbjct: 240 GVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLG 299 Query: 301 RVLAKNIVDGDTGEVIASANDELTEELLARLREADIDAVQTLYTNDLDQGGYISQTLRTD 360 + LA +++D +TGEV+ASANDE+TEELLA+ + + TLY N+LDQG YIS TLRTD Sbjct: 300 KALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTD 359 Query: 361 DTADQTAARVAIYRMMRPGEPPTEDSVEALFNGLFYSEDRYDLSAVGRMKFNRRIGRDEL 420 +TA + AARVAIYRMMRPGEPPTE++VE LFN LF+SED YDLS VGRMKFN R +L Sbjct: 360 ETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKL 419 Query: 421 T----------------------GAMTLSNEDILAVIKILVELRNGRGEVDDIDHLGNRR 458 + G LS EDI+A I LVELRNG GEVDDIDHLGNRR Sbjct: 420 SEAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRR 479 Query: 459 VRCVGELAENQFRAGLVRVERAVKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLS 518 VR VGEL ENQFR+GL RVERAVKERL QAE++NLMPHDLIN+KP+SAAI+EFFGSSQLS Sbjct: 480 VRSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLS 539 Query: 519 QFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI 578 QFMDQTNPLSE+THKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI Sbjct: 540 QFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI 599 Query: 579 NSLALYARLNEYGFLETPYRKVEGSKVTNQIDYLSAIEEGRYIIAQANATIDASLKLSDE 638 NSL++YAR N+YGFLETPYR+V KVT +IDYLSAIEEGRY+IAQANA +D+ L + Sbjct: 600 NSLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGD 659 Query: 639 LVSAREAGETILVSPERVQYMDVAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC 698 LV+ RE GETI+ +P+RVQYMDVA GQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC Sbjct: 660 LVTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC 719 Query: 699 LRPEKPLVGTGIERTVAVDSGTTVQALRGGIVDYVDAGRVVIRVNDEEAQAGEVGVDIYN 758 LRPEKP+VGTGIER+VAVDS T + A RGG+V+YVDA RVV+RV+D+EA AGEVGVDIYN Sbjct: 720 LRPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVVRVHDDEATAGEVGVDIYN 779 Query: 759 LIKYTRSNQNTNINQRPIVKVGDRVAKHDVIADGASTDLGELALGQNMLVAFMPWNGYNF 818 L+K+TRSNQ+TNINQRP VK GD + + D++ADGASTDLGELALGQNM +AFMPWNGYN+ Sbjct: 780 LVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNY 839 Query: 819 EDSILISEKVVADDRYTSIHIEELSVVARDTKLGAEEITRDISNLAENQLARLDESGITY 878 EDSILISEKV ADDRYTSIHIEEL+VVARDTKLGAE+ITRDI NL+E RLDESGI Y Sbjct: 840 EDSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVY 899 Query: 879 IGAEVEAGDTLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQ 938 IGAEVEAGD LVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLR+P+GM GTVIDVQ Sbjct: 900 IGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQ 959 Query: 939 VFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLEKMLIGKVANGGPKKLS 998 VFTREGIQRDKRAQ IID ELKRYRLDLNDQLRI + DAF R+E+M++G+ ANGGP KL+ Sbjct: 960 VFTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLA 1019 Query: 999 KGTKLDKAYLDDLDKYH-WFDIRPADDDMATALEAIKESIAEKRHQFDLAFEEKRKKLTQ 1057 KG+++ YL L H WFDIR D+D+A LE IK S+ +KR + D +E K+KKLTQ Sbjct: 1020 KGSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQ 1079 Query: 1058 GDELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVL 1117 GDEL PGVQKMVKV++A+KRRLQ GDKMAGRHGNKGVVSRILP+EDMP+MADG P DIVL Sbjct: 1080 GDELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVL 1139 Query: 1118 NPLGVPSRMNVGQVLEVHLGWAAKGLGLRIGEMLTAQVKIAELRKFLTTIYNESGKKEAL 1177 NPLGVPSRMN+GQ+LEVHLGWAAKG+G RI ML Q K ELR+FL +YN SGKKE L Sbjct: 1140 NPLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDL 1199 Query: 1178 DEFSDQEILELAANLKKGVPFATPVFDGAHEDETRRMLDLAYP--DHIAKQLGMTPSKNQ 1235 D +D+EI+ELA+NL+KG FA+PVFDGA E E R ML+LAYP D ++LG SK Q Sbjct: 1200 DALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQ 1259 Query: 1236 VTMYDGRTGEAFERSVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQR 1295 +T+YDGR+GEAF+R VTVG MHYLKLHHLVD+KMHARSTGPYSLVTQQPLGGKAQFGGQR Sbjct: 1260 ITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQR 1319 Query: 1296 FGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENLVKGDHVIDAGM 1345 FGEMEVWALEAYGA+Y LQEMLTVKSDDVNGRTK+YEN+VKG+H IDAGM Sbjct: 1320 FGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGM 1369 >NMB0132 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit Nme Neisseria meningitidis MC58 Length = 1394 Score = 2092 bits (5419), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1013/1370 (73%), Positives = 1160/1370 (84%), Gaps = 26/1370 (1%) Query: 1 MHYSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQTFLQTDKTTSQRKNEGLQSAFTSI 60 M+YSFTEKKRIRKSFAKR NV VPFLLATQI+SY FLQ + +R ++GLQ+AF SI Sbjct: 3 MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSI 62 Query: 61 FPIVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVIK 120 FPIVSHNG+ARLEF+ Y LG P FD+ ECQ RG+T+A+PLRA++RLVILDKE+ +KP +K Sbjct: 63 FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEA-SKPTVK 121 Query: 121 EMKEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR 180 E++E EVYMGE+PLMT +GSFVINGTERVIVSQLHRSPGVFFEHD+GKTHSSGKLLFSAR Sbjct: 122 EVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR 181 Query: 181 IIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFTLHAE 240 IIPYRGSWLDFEFDPKD+L+FR+DRRRKMPVTILLKA+G +EQIL F+ + F L + Sbjct: 182 IIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSN 241 Query: 241 GAEMEFVAERLRGEVARFDILDKSGKPLVAKDKRINAKHVRDIEAAGIKQISVPEDYLLG 300 G + + VA+RL+GE A+ DILDK G LVAK KRI AK++RDI AG+ ++ V + LLG Sbjct: 242 GVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLG 301 Query: 301 RVLAKNIVDGDTGEVIASANDELTEELLARLREADIDAVQTLYTNDLDQGGYISQTLRTD 360 + LA +++D +TGEV+ASANDE+TEELLA+ + + TLY N+LDQG YIS TLRTD Sbjct: 302 KALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTD 361 Query: 361 DTADQTAARVAIYRMMRPGEPPTEDSVEALFNGLFYSEDRYDLSAVGRMKFNRRIGRDEL 420 +TA + AARVAIYRMMRPGEPPTE++VE LFN LF+SED YDLS VGRMKFN R +L Sbjct: 362 ETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKL 421 Query: 421 T----------------------GAMTLSNEDILAVIKILVELRNGRGEVDDIDHLGNRR 458 + G LS EDI+A I LVELRNG GEVDDIDHLGNRR Sbjct: 422 SEAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRR 481 Query: 459 VRCVGELAENQFRAGLVRVERAVKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLS 518 VR VGEL ENQFR+GL RVERAVKERL QAE++NLMPHDLIN+KP+SAAI+EFFGSSQLS Sbjct: 482 VRSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLS 541 Query: 519 QFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI 578 QFMDQTNPLSE+THKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI Sbjct: 542 QFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI 601 Query: 579 NSLALYARLNEYGFLETPYRKVEGSKVTNQIDYLSAIEEGRYIIAQANATIDASLKLSDE 638 NSL++YAR N+YGFLETPYR+V KVT +IDYLSAIEEGRY+IAQANA +D+ L + Sbjct: 602 NSLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGD 661 Query: 639 LVSAREAGETILVSPERVQYMDVAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC 698 LV+ RE GETI+ +P+RVQYMDVA GQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC Sbjct: 662 LVTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPC 721 Query: 699 LRPEKPLVGTGIERTVAVDSGTTVQALRGGIVDYVDAGRVVIRVNDEEAQAGEVGVDIYN 758 LRPEKP+VGTGIER+VAVDS T + A RGG+V+YVDA RVVIRV+D+EA AGEVGVDIYN Sbjct: 722 LRPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYN 781 Query: 759 LIKYTRSNQNTNINQRPIVKVGDRVAKHDVIADGASTDLGELALGQNMLVAFMPWNGYNF 818 L+K+TRSNQ+TNINQRP VK GD + + D++ADGASTD GELALGQNM +AFMPWNGYN+ Sbjct: 782 LVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDFGELALGQNMTIAFMPWNGYNY 841 Query: 819 EDSILISEKVVADDRYTSIHIEELSVVARDTKLGAEEITRDISNLAENQLARLDESGITY 878 EDSILISEKV ADDRYTSIHIEEL+VVARDTKLGAE+ITRDI NL+E RLDESGI Y Sbjct: 842 EDSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVY 901 Query: 879 IGAEVEAGDTLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQ 938 IGAEVEAGD LVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLR+P+GM GTVIDVQ Sbjct: 902 IGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQ 961 Query: 939 VFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLEKMLIGKVANGGPKKLS 998 VFTREGIQRDKRAQ IID ELKRYRLDLNDQLRI + DAF R+E+M++G+ ANGGP KL+ Sbjct: 962 VFTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLA 1021 Query: 999 KGTKLDKAYLDDLDKYH-WFDIRPADDDMATALEAIKESIAEKRHQFDLAFEEKRKKLTQ 1057 KG+++ YL L H WFDIR D+D+A LE IK S+ +KR + D +E K+KKLTQ Sbjct: 1022 KGSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQ 1081 Query: 1058 GDELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVL 1117 GDEL PGVQKMVKV++A+KRRLQ GDKMAGRHGNKGVVSRILP+EDMP+MADG P DIVL Sbjct: 1082 GDELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVL 1141 Query: 1118 NPLGVPSRMNVGQVLEVHLGWAAKGLGLRIGEMLTAQVKIAELRKFLTTIYNESGKKEAL 1177 NPLGVPSRMN+GQ+LEVHLGWAAKG+G RI ML Q K ELR+FL +YN SGKKE L Sbjct: 1142 NPLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDL 1201 Query: 1178 DEFSDQEILELAANLKKGVPFATPVFDGAHEDETRRMLDLAYP--DHIAKQLGMTPSKNQ 1235 D +D+EI+ELA+NL+KG FA+PVFDGA E E R ML+LAYP D ++LG SK Q Sbjct: 1202 DALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQ 1261 Query: 1236 VTMYDGRTGEAFERSVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQR 1295 +T+YDGR+GEAF+R VTVG MHYLKLHHLVD+KMHARSTGPYSLVTQQPLGGKAQFGGQR Sbjct: 1262 ITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQR 1321 Query: 1296 FGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENLVKGDHVIDAGM 1345 FGEMEVWALEAYGA+Y LQEMLTVKSDDVNGRTK+YEN+VKG+H IDAGM Sbjct: 1322 FGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGM 1371 >PA4270 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit Pae Pseudomonas aeruginosa Length = 1357 Score = 1873 bits (4852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 910/1346 (67%), Positives = 1084/1346 (80%), Gaps = 13/1346 (0%) Query: 1 MHYSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQTFLQTDKTTSQRKNEGLQSAFTSI 60 M YS+TEKKRIRK F+K +V +VP+LLA Q++SY+ FLQ T Q ++ GL +AF S+ Sbjct: 1 MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKEQFRDVGLHAAFKSV 60 Query: 61 FPIVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVIK 120 FPI+S++G A LE++ Y LG P FDVKEC RG+TFA PLR KVRL+I D+ES K IK Sbjct: 61 FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDRESSNK-AIK 119 Query: 121 EMKEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR 180 ++KEQEVYMGE+PLMT G+F+INGTERVIVSQLHRSPGVFF+HDRGKTHSSGKLL+SAR Sbjct: 120 DIKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSAR 179 Query: 181 IIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFTLHAE 240 IIPYRGSWLDFEFDPKD +F R+DRRRK+P ++LL+A+G ++E+IL F+ + F + E Sbjct: 180 IIPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALGYSTEEILNAFYATNVFHIKGE 239 Query: 241 GAEMEFVAERLRGEVARFDILDKSGKPLVAKDKRINAKHVRDIEAAGIKQISVPEDYLLG 300 +E V +RLRGEVA DI D SGK +V + +RI A+H+ +E AG+ Q+ VP DYL+G Sbjct: 240 TLNLELVPQRLRGEVASIDIKDGSGKVIVEQGRRITARHINQLEKAGVSQLEVPFDYLIG 299 Query: 301 RVLAKNIVDGDTGEVIASANDELTEELLARLREADIDAVQTLYTNDLDQGGYISQTLRTD 360 R +AK IV TGE+IA N ELT +LLA++ +A + ++TLYTND+D G +IS TL+ D Sbjct: 300 RTIAKAIVHPATGEIIAECNTELTLDLLAKVAKAQVVRIETLYTNDIDCGPFISDTLKID 359 Query: 361 DTADQTAARVAIYRMMRPGEPPTEDSVEALFNGLFYSEDRYDLSAVGRMKFNRRIGRDEL 420 +T++Q A V IYRMMRPGEPPT+++ E LF LF+S +RYDLSAVGRMKFNRRIGR E+ Sbjct: 360 NTSNQLEALVEIYRMMRPGEPPTKEAAETLFGNLFFSAERYDLSAVGRMKFNRRIGRTEI 419 Query: 421 TGAMTLSNEDILAVIKILVELRNGRGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA 480 G LS EDI+ V+K LV++RNG+G VDDIDHLGNRRVRCVGE+AENQFR GLVRVERA Sbjct: 420 EGPGVLSKEDIIDVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERA 479 Query: 481 VKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG 540 VKERL AE++ LMP DLIN+KP++AAI+EFFGSSQLSQFMDQ NPLSEITHKRRVSALG Sbjct: 480 VKERLSMAESEGLMPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALG 539 Query: 541 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKV 600 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLA YAR N+YGFLE+PYR V Sbjct: 540 PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNKYGFLESPYRVV 599 Query: 601 EGSKVTNQIDYLSAIEEGRYIIAQANATIDASLKLSDELVSAREAGETILVSPERVQYMD 660 + S VT++I +LSAIEE ++IAQA+AT++ +L DELV+ R E + +PE V MD Sbjct: 600 KDSLVTDEIVFLSAIEEADHVIAQASATLNEKGQLVDELVAVRHLNEFTVKAPEDVTLMD 659 Query: 661 VAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPLVGTGIERTVAVDSGT 720 V+P QVVSVAASLIPFLEHDDANRALMG+NMQRQAVP LR +KPLVGTG+ER VA DSG Sbjct: 660 VSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGV 719 Query: 721 TVQALRGGIVDYVDAGRVVIRVNDEEAQAGEVGVDIYNLIKYTRSNQNTNINQRPIVKVG 780 V A RGG++D VDA RVV+RV D+E + GE GVDIYNL KYTRSNQNT INQRP+V G Sbjct: 720 CVVARRGGVIDSVDASRVVVRVADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKG 779 Query: 781 DRVAKHDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE 840 D VA+ D++ADG STD+GELALGQNM VAFMPWNG+NFEDSI +SE+VV +DR+T+IHI+ Sbjct: 780 DVVARGDILADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQ 839 Query: 841 ELSVVARDTKLGAEEITRDISNLAENQLARLDESGITYIGAEVEAGDTLVGKVTPKGETQ 900 EL+ VARDTKLG EEIT DI N+ E L +LDE+GI Y+GAEV+AGD LVGKVTPKGETQ Sbjct: 840 ELTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVQAGDILVGKVTPKGETQ 899 Query: 901 LTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFTREGIQRDKRAQQIIDDELK 960 LTPEEKLLRAIFGEKASDVKDTSLRVP+G GTVIDVQVFTR+G++RD RA I +L Sbjct: 900 LTPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALSIEKMQLD 959 Query: 961 RYRLDLNDQLRIVEGDAFQRLEKMLIGKVANGGPKKLSKGTKLDKAYLDDLDKYHWFDIR 1020 + R DLN++ RIVEG F+RL L+G A GGP L KGT++ YLD L++ WF +R Sbjct: 960 QIRKDLNEEFRIVEGATFERLRAALVGAKAEGGP-ALKKGTEITDDYLDGLERGQWFKLR 1018 Query: 1021 PADDDMATALEAIKESIAEKRHQFDLAFEEKRKKLTQGDELPPGVQKMVKVYLAVKRRLQ 1080 ADD + LE + I+++R D FE+K++KL QGD+L PGV K+VKVYLA+KRR+Q Sbjct: 1019 MADDALNEQLEKAQAYISDRRQLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQ 1078 Query: 1081 PGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAA 1140 PGDKMAGRHGNKGVVS I+P+EDMPH A+GTP DIVLNPLGVPSRMNVGQ+LE HLG AA Sbjct: 1079 PGDKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILETHLGLAA 1138 Query: 1141 KGLGLRIGEMLTAQVKIAELRKFLTTIYNE-SGKKEALDEFSDQEILELAANLKKGVPFA 1199 KGLG +I ML Q K+AELRKFL IYNE G++E LDE D EIL LA NL+ GVP A Sbjct: 1139 KGLGEKINRMLEEQRKVAELRKFLHEIYNEIGGREENLDELGDNEILALAKNLRGGVPMA 1198 Query: 1200 TPVFDGAHEDETRRMLDLAYPDHIAKQLGMTPSKNQVTMYDGRTGEAFERSVTVGYMHYL 1259 TPVFDGA E E + ML LA P Q+ ++DGRTG FER TVGYM+ L Sbjct: 1199 TPVFDGAKEREIKAMLKLAD----------LPESGQMRLFDGRTGNQFERPTTVGYMYML 1248 Query: 1260 KLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTV 1319 KL+HLVDDKMHARSTG YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGA+Y LQEMLTV Sbjct: 1249 KLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTV 1308 Query: 1320 KSDDVNGRTKVYENLVKGDHVIDAGM 1345 KSDDVNGRTK+Y+N+V GDH ++AGM Sbjct: 1309 KSDDVNGRTKMYKNIVDGDHRMEAGM 1334 >XF2633 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit Xfa Xylella fastidiosa 9a5c Length = 1388 Score = 1828 bits (4735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 891/1371 (64%), Positives = 1079/1371 (78%), Gaps = 41/1371 (2%) Query: 3 YSFTEKKRIRKSFAKRANVHNVPFLLATQIESYQTFLQTDKTTSQRKNEGLQSAFTSIFP 62 YSFTEKKRIRK F K ++ VPFLLA Q++SY+ FLQ D +SQRK+ GL +A S+FP Sbjct: 8 YSFTEKKRIRKDFGKHRSILKVPFLLAIQVDSYRAFLQGDVESSQRKDIGLHAALKSVFP 67 Query: 63 IVSHNGFARLEFLSYVLGAPPFDVKECQQRGLTFASPLRAKVRLVILDKESPTKPVIKEM 122 IVS++G A LE++ Y LG P FD +EC+QRG+++ +PLR VRLVI D+ES TK V K + Sbjct: 68 IVSYSGNAALEYVGYKLGEPMFDERECRQRGMSYGAPLRVTVRLVIYDRESSTKAV-KYI 126 Query: 123 KEQEVYMGELPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARII 182 KEQEVY+GE+PLMT G+F++NGTERVIVSQLHRSPGVFF+HDRGKTHSSGKLL+SARII Sbjct: 127 KEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARII 186 Query: 183 PYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGMTSEQILANFFVFDNFTLHAE-G 241 P RGSWLDFEFDPKD LF R+DRRRK+PV+ILL+A+G ++E+IL FF + F ++ + G Sbjct: 187 PCRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYSNEEILGEFFEINTFHINPDKG 246 Query: 242 AEMEFVAERLRGEVARFDILDKSGKPLVAKDKRINAKHVRDIEAAGIKQISVPEDYLLGR 301 ++E V ERLRGE+ F++ D G +V KRI A+HV+ +EA+GI ++VP++YL+GR Sbjct: 247 VQLELVPERLRGEILSFNLTDGGGV-IVEAGKRITARHVKQLEASGISALAVPDEYLIGR 305 Query: 302 VLAKNIVDGDTGEVIASANDELTEELLARLREADIDAVQTLYTNDLDQGGYISQTLRTDD 361 +L+ +++D TGE++ASAN E+ E+ + R+A ID+V TL+ NDLD+G Y+S TLR D Sbjct: 306 ILSHDVIDATTGELLASANSEVNEDRIVAFRKAGIDSVGTLWVNDLDRGAYLSNTLRIDP 365 Query: 362 TADQTAARVAIYRMMRPGEPPTEDSVEALFNGLFYSEDRYDLSAVGRMKFNRRIGRDELT 421 T Q A+V IYRMMRPGEPPT+++ + LF+ LF++ DRYDLS VGRMKFNRR+GR E+ Sbjct: 366 TRTQLEAQVEIYRMMRPGEPPTKEAAQNLFHNLFFTFDRYDLSMVGRMKFNRRVGRKEVA 425 Query: 422 GAMTLSNE----------------------DILAVIKILVELRNGRGEVDDIDHLGNRRV 459 G L ++ DIL VIK L E+RNGRG VDDIDHLGNRRV Sbjct: 426 GEPVLYDKKYFSDRNDEESRRLVSKLGETSDILDVIKGLCEIRNGRGVVDDIDHLGNRRV 485 Query: 460 RCVGELAENQFRAGLVRVERAVKERLGQAEADNLMPHDLINSKPISAAIREFFGSSQLSQ 519 R VGE+AEN FR GLVRVERAVKERL AE++ L P +LIN+KP++AAI+EFFGSSQLSQ Sbjct: 486 RSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQ 545 Query: 520 FMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN 579 FMDQ NPLSE+THKRR+SALGPGGLTRERAGFEVRDVH +HYG +C IETPEGPNIGLIN Sbjct: 546 FMDQNNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHLSHYGCLCTIETPEGPNIGLIN 605 Query: 580 SLALYARLNEYGFLETPYRKVEGSKVTNQIDYLSAIEEGRYIIAQANATIDASLKLSDEL 639 SLA++AR N+YGFLETPYRKV +VT++++YLSAIEE +Y+IAQAN D + +L++ Sbjct: 606 SLAVFARTNQYGFLETPYRKVVEGRVTDEVEYLSAIEENQYVIAQANTLTDDNGQLTESF 665 Query: 640 VSAREAGETILVSPERVQYMDVAPGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL 699 V R GE++L P V YMDV+P Q VSVAA+L+PFLEHDDANRALMGANMQRQAVP L Sbjct: 666 VPCRFQGESLLKPPSYVHYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTL 725 Query: 700 RPEKPLVGTGIERTVAVDSGTTVQALRGGIVDYVDAGRVVIRVNDEE-AQAGEVGVDIYN 758 R +KPLVGTGIERTVA DSG TV A RGG++D VDAGR+V++VN+ E A + GVDIY Sbjct: 726 RAQKPLVGTGIERTVARDSGVTVNARRGGVIDQVDAGRIVVKVNESEIIGATDAGVDIYG 785 Query: 759 LIKYTRSNQNTNINQRPIVKVGDRVAKHDVIADGASTDLGELALGQNMLVAFMPWNGYNF 818 LIKYTRSNQNT INQRP+V VGD V DV+ADG STD+GELALGQNML+AFMPWNGYNF Sbjct: 786 LIKYTRSNQNTCINQRPLVNVGDIVTSGDVLADGPSTDIGELALGQNMLIAFMPWNGYNF 845 Query: 819 EDSILISEKVVADDRYTSIHIEELSVVARDTKLGAEEITRDISNLAENQLARLDESGITY 878 EDSIL+SE+VV +DRYT+IHIEEL+ +ARDTKLG+EEI+ DI N++E L RLDESG+ Y Sbjct: 846 EDSILLSERVVEEDRYTTIHIEELTCIARDTKLGSEEISADIPNVSEQALNRLDESGVVY 905 Query: 879 IGAEVEAGDTLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQ 938 IGAEV AGD LVGKVTPKGE+QLTPEEKLLRAIFGEKASDVKD+SLRVP GM GTVIDVQ Sbjct: 906 IGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQ 965 Query: 939 VFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEGDAFQRLEKMLIGKVANGGPKKLS 998 VFTR+GI++DKRA QI + E+KR + D +DQ RI+EG + RL ++GKV N G + Sbjct: 966 VFTRDGIEKDKRAHQIEEYEIKRVKKDFDDQFRILEGAIYARLRSQIVGKVVNSG-VDIK 1024 Query: 999 KGTKLDKAYLDDLDKYHWFDIRPADDDMATALEAIKESIAEKRHQFDLAFEEKRKKLTQG 1058 KG + AYLD L K WF +R D+ A++ ++ I + +FD F +KR K+TQG Sbjct: 1025 KGEVITGAYLDGLKKSDWFALRMKDEVAVEAIDRAQKQIQAYQKEFDQRFSDKRSKITQG 1084 Query: 1059 DELPPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRILPIEDMPHMADGTPADIVLN 1118 D+L PGV KMVKV+LAVKR +QPGDKMAGRHGNKGVVS ++P+EDMP M DGTP DIVLN Sbjct: 1085 DDLAPGVLKMVKVFLAVKRCIQPGDKMAGRHGNKGVVSNVVPVEDMPFMEDGTPVDIVLN 1144 Query: 1119 PLGVPSRMNVGQVLEVHLGWAAKGLGLRIGEMLTAQVKIAELRKFLTTIYNES----GKK 1174 PLGVPSRMN+GQ+LEVHLGWAAKGLG RI ML A IA+LRKFL IYN G++ Sbjct: 1145 PLGVPSRMNIGQILEVHLGWAAKGLGHRIQRMLEANAAIADLRKFLNEIYNHDKSVVGER 1204 Query: 1175 EALDEFSDQEILELAANLKKGVPFATPVFDGAHEDETRRMLDLAYPDHIAKQLGMTPSKN 1234 L +FSD E+L +A NL GVP A+PVFDGA E E +RMLDLA P+ Sbjct: 1205 VDLSQFSDDELLNMAKNLTDGVPMASPVFDGASEQEIKRMLDLAE----------LPTGG 1254 Query: 1235 QVTMYDGRTGEAFERSVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQ 1294 Q +YDG TGE F+R TVGYMHYLKL+HLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQ Sbjct: 1255 QTQLYDGHTGEPFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQ 1314 Query: 1295 RFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENLVKGDHVIDAGM 1345 RFGEMEVWALEAYGA+Y LQEMLTVKSDDV GR ++Y+N+V GDH + AGM Sbjct: 1315 RFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGDHQMVAGM 1365