BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0328.p (1412 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2405 0.0 NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2180 0.0 NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 2176 0.0 PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/16... 1939 0.0 XF2632 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/16... 1876 0.0 >RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Rso Ralstonia solanacearum Length = 1409 Score = 2405 bits (6233), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1182/1380 (85%), Positives = 1266/1380 (91%), Gaps = 6/1380 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK 60 MKALLDLF+QVQQ EQFDAIKIGLASPEKIRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKALLDLFRQVQQEEQFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELA+PTAHIWFLKSL Sbjct: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGD-DFTAF 179 PSRLGMVLDMTLRDIERVLYFEA+VV +PGMTPLKK QIMSEDDY AK +EYG+ +F A Sbjct: 121 PSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLKKSQIMSEDDYLAKCDEYGEGEFVAL 180 Query: 180 MGAEGIRELLRSIDIDRDAETLRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIM 239 MGAEGIRELLR IDI++ ET+R EL+ + SEAKIKK+AKRLKVLEAFQRSGIKPDWMI+ Sbjct: 181 MGAEGIRELLRGIDIEKQIETIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPDWMIL 240 Query: 240 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRML 299 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL+APEII RNEKRML Sbjct: 241 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML 300 Query: 300 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 359 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP Sbjct: 301 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 360 Query: 360 QLKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEDVIREH 419 LKLHQCGLPKLMALELFKPFIF+KLE MG+ATTIKAAKK VE Q PVVWDILE+VIREH Sbjct: 361 TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH 420 Query: 420 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME 479 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQME Sbjct: 421 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME 480 Query: 480 ARTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKNEGMLFQDVSEVIRAYDN 539 ARTLMLASNN+LFP+NG+PSIVPSQD+VLGLYY TR+ IN + EGM F D+SEVIRAY+N Sbjct: 481 ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGRGEGMTFADISEVIRAYEN 540 Query: 540 KEVELATRVTVRIVE----NPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNR 595 KEVELA+RV VRI E NP+ F + TTVGRAILSEILPKGLPFSVLN+ Sbjct: 541 KEVELASRVNVRITEYDLVNPEADGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK 600 Query: 596 ALKKKEISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATII 655 LKKKEIS+LINT+FRKCGLR TV+FAD+L+QSGFRLATRAGISI +DDMLVPP K II Sbjct: 601 PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPAKEKII 660 Query: 656 ATAEQEVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDDVGKAMMDQLKVEDVVRRDGTKG 715 + A +VK+ ++QY SGLVT ERYN VVDIWG AGD VGKAMM+QL+ EDVV R G Sbjct: 661 SEAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQTEDVVDRHGKTV 720 Query: 716 TQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 775 QESFN+IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI Sbjct: 721 KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 780 Query: 776 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGASMKAMVEGGEVIEA 835 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTSNG +MKA+VEGGEVIEA Sbjct: 781 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVIEA 840 Query: 836 LRDRILGRVAATDIINPETQATLYEAGTLMDEDTVEEVERLGIDEVKVRTPLTCDTRYGL 895 LRDRILGRV D++NPETQ T EAGTL+DED VE ++ +G+DEVKVRTPLTCDTRYGL Sbjct: 841 LRDRILGRVVVNDVVNPETQETAIEAGTLLDEDLVELIDSIGVDEVKVRTPLTCDTRYGL 900 Query: 896 CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKS 955 CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAK+ Sbjct: 901 CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA 960 Query: 956 NGTIRFTATMRYVTNGKGELIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGMVIKA 1015 GT+RFTATMRYVTN KGE IVISRSGE LITDD GRERERHK+PYGATL+V DG IKA Sbjct: 961 TGTVRFTATMRYVTNAKGEQIVISRSGEALITDDHGRERERHKIPYGATLLVHDGQSIKA 1020 Query: 1016 GTALATWDPLTRPIITEYTGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSAAK 1075 GT LATWDPLTRPII+EY+GT+KFENVEEG TVAKQ+DEVTGLSTLVVIDAKRR +SA+K Sbjct: 1021 GTQLATWDPLTRPIISEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRR-TSASK 1079 Query: 1076 VLRPQVKLLNEQGEEVKIAGTEHAVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTR 1135 +RPQVKLL+ G EVKI GT+H+VTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTR Sbjct: 1080 GIRPQVKLLDSSGAEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTR 1139 Query: 1136 DITGGLPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGAKHEFLITKD 1195 DITGGLPRVAELFEARSPKDA +LAEVTGT +FGK+TKGKQRL ITD+DG HEFLI K+ Sbjct: 1140 DITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKE 1199 Query: 1196 KQVLVHDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHI 1255 KQVLVHDGQVVNKGEMIV+GPADP DILRL G+E LA YIVDEVQDVYRLQGVKINDKHI Sbjct: 1200 KQVLVHDGQVVNKGEMIVEGPADPHDILRLKGVEELATYIVDEVQDVYRLQGVKINDKHI 1259 Query: 1256 EVIVRQMLRRVQVVDPGDTNYITGEQVERSELLDENDRVNAATKIPATYENVLLGITKAS 1315 EVIVRQMLRRVQ+VD GDT +I GEQVERSELLDEND+V A K PATYEN+LLGITKAS Sbjct: 1260 EVIVRQMLRRVQIVDVGDTKFIPGEQVERSELLDENDKVIAEGKRPATYENLLLGITKAS 1319 Query: 1316 LSTDSFISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKD 1375 LSTDSFISAASFQETTRVLTEAAIMGK D LRGLKENVIVGRLIPAGTGLA+HRARK K+ Sbjct: 1320 LSTDSFISAASFQETTRVLTEAAIMGKVDDLRGLKENVIVGRLIPAGTGLAYHRARKAKE 1379 >NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit NmA Neisseria meningitidis Z2491 Length = 1391 Score = 2180 bits (5648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1070/1382 (77%), Positives = 1206/1382 (87%), Gaps = 6/1382 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASPE IRSWSYGEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFTAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDRDAETLRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAEGIRELLR++++ + E LR EL+ + S+ KIKK AKRLKVLEAF RSG+K +WMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEDVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GLA+T+KAAKKLVE + P VWDILE+VIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKNEGMLFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ INAK EG LF DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRVTVRIVENPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T++TVR+ E K+ GEF V RYETTVGRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATIIATAEQ 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA ++A A Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDDVGKAMMDQLKVEDVVRRDGTKGTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD + KAMMD L + V+ RDG + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGASMKAMVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIINPETQATLYEAGTLMDEDTVEEVERLGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+++P + TL EAGTL+ E V+ +++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTIR 960 GRDL RG LVN+GEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 961 FTATMRYVTNGKGELIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGMVIKAGTALA 1020 F++ MRYV N KGEL+VI RS EV+I DD+GRERERHKVPYGA L+V+DGM IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1021 TWDPLTRPIITEYTGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSAAKVLRPQ 1080 TWDP TRP+ITE+ G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR SSA+K+LRP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1081 VKLLNEQGEEVKIAGTEHAVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1140 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1141 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGAKHEFLITKDKQVLV 1200 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD+DG +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1201 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1260 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1261 QMLRRVQVVDPGDTNYITGEQVERSELLDENDRVNAATKIPATYENVLLGITKASLSTDS 1320 QMLRRV + D G+T +ITGEQVER +++ N++ K PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1321 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAD 1380 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQGV 1379 Query: 1381 ER 1382 E+ Sbjct: 1380 EQ 1381 >NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Nme Neisseria meningitidis MC58 Length = 1391 Score = 2176 bits (5638), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1069/1382 (77%), Positives = 1205/1382 (87%), Gaps = 6/1382 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASPE IRSWSYGEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFTAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDRDAETLRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAEGIRELLR++++ + E LR EL+ + S+ KIKK AKRLKVLEAF RSG+K +WMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEDVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GLA+T+KAAKKLVE + P VWDILE+VIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKNEGMLFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ INAK EG LF DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRVTVRIVENPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T++TVR+ E K+ GEF V RYETTVGRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATIIATAEQ 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA ++A A Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDDVGKAMMDQLKVEDVVRRDGTKGTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD + KAMMD L + V+ R G + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGASMKAMVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIINPETQATLYEAGTLMDEDTVEEVERLGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+++P + TL EAGTL+ E V+ +++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTIR 960 GRDL RG LVN+GEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 961 FTATMRYVTNGKGELIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGMVIKAGTALA 1020 F++ MRYV N KGEL+VI RS EV+I DD+GRERERHKVPYGA L+V+DGM IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1021 TWDPLTRPIITEYTGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSAAKVLRPQ 1080 TWDP TRP+ITE+ G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR SSA+K+LRP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1081 VKLLNEQGEEVKIAGTEHAVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1140 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1141 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGAKHEFLITKDKQVLV 1200 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD+DG +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1201 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1260 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1261 QMLRRVQVVDPGDTNYITGEQVERSELLDENDRVNAATKIPATYENVLLGITKASLSTDS 1320 QMLRRV + D G+T +ITGEQVER +++ N++ K PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1321 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAD 1380 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQEV 1379 Query: 1381 ER 1382 E+ Sbjct: 1380 EQ 1381 >PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Pae Pseudomonas aeruginosa Length = 1399 Score = 1939 bits (5024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 939/1390 (67%), Positives = 1136/1390 (81%), Gaps = 4/1390 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK 60 MK LL+L K Q E+FDAI+IGLASPE IRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLKHRGVICEKCGVEV LAKVRRERMGHIELASP AHIWFLKSL Sbjct: 61 IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFTAFM 180 PSR+G++LDMTLRDIERVLYFE+YVV DPGMT L+K Q+++++ Y EE+GDDF A M Sbjct: 121 PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM 180 Query: 181 GAEGIRELLRSIDIDRDAETLRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAE + ELL +ID++ + LR E+ ++ SE KIKK +KRLK++EAFQ SG KP+WM++ Sbjct: 181 GAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNKPEWMVLT 240 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL++L AP+II RNEKRMLQ Sbjct: 241 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ 300 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVD+LLDNGRRG+A+TG+NKRPLKSLA+MIKGK GRFRQNLLGKRVDYSGRSVI VGP Sbjct: 301 EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT 360 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEDVIREHP 420 L+LHQCGLPK MALELFKPFIF KLE G+ATTIKAAKK+VE + P VWD+L +VIREHP Sbjct: 361 LRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHP 420 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAA+NADFDGDQMAVHVPL++EAQ+EA Sbjct: 421 VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA 480 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKNEGMLFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+V+GLYY TREAINAK EGM F D+ EV RAY + Sbjct: 481 RALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSG 540 Query: 541 EVELATRVTVRIVENPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNRALKKK 600 + L RV VRI E K G+ + +TTVGRA+L +++P GLPF V+N+++KKK Sbjct: 541 QASLHARVKVRINEKIKGE-DGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKK 599 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATIIATAEQ 660 ISKLIN +R GL+ TV+FADQLM +GF +T +G+SI V+D ++P +KA II A Sbjct: 600 AISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIINAATD 659 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDDVGKAMMDQLKVEDVVRRDGTKGTQESF 720 EVK+IE QY+SGLVT GE+YNKV+D+W KA D+V KAMM L E VV R+G + QESF Sbjct: 660 EVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESF 719 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N++YMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA Sbjct: 720 NSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 779 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGASMKAMVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDV QDLVV E DCGT +G M +EGG+V+E L +R+ Sbjct: 780 RKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERV 839 Query: 841 LGRVAATDIINPETQATLYEAGTLMDEDTVEEVERLGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A D+ P + + AGTL+DE V+ +E + +DEV VR+P+TC+TR+G+CA CY Sbjct: 840 LGRVIARDVFKPGSDEVIVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCY 899 Query: 901 GRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTIR 960 GRDL RG VN GEAVGVIAAQSIGEPGTQLTMRTFHIGGAASR + A +V+ K+ GTIR Sbjct: 900 GRDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIR 959 Query: 961 FTATMRYVTNGKGELIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGMVIKAGTALA 1020 +++V G L+ +SRSGE+ + DD GRERER+K+PYGA + VK+G + G +A Sbjct: 960 LH-NLKHVVRADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVA 1018 Query: 1021 TWDPLTRPIITEYTGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSAAKVLRPQ 1080 WDP T PI+TE GTV F +EEG TV +Q DE+TGL+ + V+D K R +A K +RP Sbjct: 1019 KWDPHTHPIVTEVDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDR-PAAGKDIRPA 1077 Query: 1081 VKLLNEQGEEVKIAGTEHAVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1140 VKL++ G+++ + GT+ AL+ + DG +V +G+V+ARIP E+ KTRDITGG Sbjct: 1078 VKLIDAAGKDLLLPGTDVPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGG 1137 Query: 1141 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGAK-HEFLITKDKQVL 1199 LPRVA+LFEAR PK+ +LAE++GT++FGKETKGK+RL IT DG+ +E LI K + + Sbjct: 1138 LPRVADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLN 1197 Query: 1200 VHDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIV 1259 V +G+ VN+GE+I DGP++P DILRLLG+ +LA+YIV+E+QDVYRLQGVKINDKHIE I+ Sbjct: 1198 VFEGEQVNRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETIL 1257 Query: 1260 RQMLRRVQVVDPGDTNYITGEQVERSELLDENDRVNAATKIPATYENVLLGITKASLSTD 1319 RQMLR+V+V + GD+++I G+QVE +++L+EN+++ K PA YE VLLGITKASLST+ Sbjct: 1258 RQMLRKVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTE 1317 Query: 1320 SFISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEA 1379 SFISAASFQETTRVLTEAA+ GK+D LRGLKENV+VGRLIPAGTGLA+H RK + Sbjct: 1318 SFISAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGK 1377 Query: 1380 DERAALLESE 1389 +R + E+E Sbjct: 1378 PQRVSASEAE 1387 >XF2632 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Xfa Xylella fastidiosa 9a5c Length = 1430 Score = 1876 bits (4859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 908/1373 (66%), Positives = 1104/1373 (80%), Gaps = 4/1373 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK 60 MK LL+LF Q +Q FDAIKIGLASP IRSWS+GEVKKPETINYRTFKPERDGLFCA Sbjct: 24 MKDLLNLFNQQRQTLDFDAIKIGLASPALIRSWSFGEVKKPETINYRTFKPERDGLFCAA 83 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGPIKDYECLCGKYKR+KHRGV+CEKCG EVTLAKVRRERMG IELASP AHIWFLKSL Sbjct: 84 IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGSIELASPVAHIWFLKSL 143 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFTAFM 180 PSR+G++LDMTLRDIERVLYFEAYVVT+PG+TPL++ Q+++E+ Y +E+ DDF A M Sbjct: 144 PSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTPLERRQLLTEEQYLQARQEHADDFDATM 203 Query: 181 GAEGIRELLRSIDIDRDAETLRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAE + ELLR ID+ + LR E+ + SE K+K+ KR+K++EAF SG +P+WMI+ Sbjct: 204 GAEAVYELLRMIDLQSEMARLREEIVVTGSETKLKRLTKRIKLIEAFIESGNRPEWMILT 263 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRL RL+EL AP+II RNEKRMLQ Sbjct: 264 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLCRLLELSAPDIIVRNEKRMLQ 323 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 E+VD+LLDNGRRG+A+TG NKRPLKSLA+MIKGK GRFRQNLLGKRVDYS RSVI+VGP Sbjct: 324 ESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSARSVIIVGPN 383 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEDVIREHP 420 L+LHQCGLPK MALELFKPF+F KL+ GLATTIKAAKKLVE +E VWDILE+VI EHP Sbjct: 384 LRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVISEHP 443 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHR GIQAFEPVLIEGKAIQLHPLVC AFNADFDGDQMAVHVPLS+EAQ+EA Sbjct: 444 VVLNRAPTLHRQGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA 503 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKNEGMLFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+VLGLYY +R N K EGM+F + SE+ RAYDN Sbjct: 504 RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSELKRAYDNS 563 Query: 541 EVELATRVTVRIVENPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNRALKKK 600 VEL +V VRI E D G + +TTVGRA+LSEILP+GLPF ++N + KK Sbjct: 564 VVELHAKVKVRITEIETDD-RGLRSKASLIVDTTVGRALLSEILPEGLPFVLVNTEMTKK 622 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATIIATAEQ 660 IS+LIN+S+R GL+ TVVFAD+LM +G+ ATRAG+SIC+DDML+P +K I+ AEQ Sbjct: 623 NISRLINSSYRMLGLKDTVVFADKLMYTGYAYATRAGVSICIDDMLIPIEKKEILGEAEQ 682 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDDVGKAMMDQLKVEDVVRRDGTKGTQESF 720 EV +I++QY SGLVTAGERYNKVVDIW + + + KAMMD + E VV DG Q+S Sbjct: 683 EVLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTEKVVNTDGEIVDQKSM 742 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N++Y+MADSGARGS QIRQLA MRGLM +PDGSIIETPI ANFREGL+V +YF STHGA Sbjct: 743 NSLYIMADSGARGSPQQIRQLAAMRGLMVRPDGSIIETPIKANFREGLSVQEYFNSTHGA 802 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGASMKAMVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDL V++ DCGT+ G +M +VEGG+V+E L+DR+ Sbjct: 803 RKGLADTALKTANSGYLTRRLVDVTQDLCVVQLDCGTAGGLTMTPIVEGGDVVEPLKDRV 862 Query: 841 LGRVAATDIINP-ETQATLYEAGTLMDEDTVEEVERLGIDEVKVRTPLTCDTRYGLCAKC 899 LGRV A D+ P + TL+DE V ++E G+ VKVR+P+TC++ +G+CA C Sbjct: 863 LGRVVAEDVFLPGNDDEPIVTRSTLLDEQWVAKLEEAGVQSVKVRSPITCESPFGVCALC 922 Query: 900 YGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTI 959 YGRDL RG LVN GEAVGVIAAQSIGEPGTQLTMRTFHIGG A AA ++ K++G++ Sbjct: 923 YGRDLARGHLVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTALSAAAVDNITVKTSGSV 982 Query: 960 RFTATMRYVTNGKGELIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGMVIKAGTAL 1019 +FT ++YV + G L+ +SRSGE+ + D GRERER+K+PYGAT+ VKD +K+G L Sbjct: 983 KFT-NLKYVEHVNGTLVAVSRSGEISVLDTHGRERERYKLPYGATINVKDMAEVKSGQIL 1041 Query: 1020 ATWDPLTRPIITEYTGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGSSAAKVLRP 1079 A WDP PI++E G V+F + +G TV ++ D++TGLS+ + D KRRGS K LRP Sbjct: 1042 ANWDPHNHPIVSEVAGFVRFIDFVDGVTVIEKTDDLTGLSSREIADLKRRGSQ-GKDLRP 1100 Query: 1080 QVKLLNEQGEEVKIAGTEHAVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITG 1139 V++++++G ++ I GT+ + +++ ++DG V +G+V+A+IP E+ KTRDITG Sbjct: 1101 LVRIVDKKGNDLTIPGTDLSAQYLLPPRSIVNLQDGAPVGIGDVVAKIPQEASKTRDITG 1160 Query: 1140 GLPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGAKHEFLITKDKQVL 1199 GLPRVA+LFEAR PKD +LAE +G ++FGK+TKGKQRL I D DG++HE LI K +Q++ Sbjct: 1161 GLPRVADLFEARRPKDPAILAERSGVISFGKDTKGKQRLIIKDADGSEHEELIPKYRQII 1220 Query: 1200 VHDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIV 1259 V +G+ V KGE IVDG PQDILRLLGIE LA Y+V E+QDVYRLQGVKINDKHIEVI Sbjct: 1221 VFEGEHVTKGETIVDGEPSPQDILRLLGIEPLAAYLVKEIQDVYRLQGVKINDKHIEVIT 1280 Query: 1260 RQMLRRVQVVDPGDTNYITGEQVERSELLDENDRVNAATKIPATYENVLLGITKASLSTD 1319 RQMLR+V++VD G++ ++ GEQVER ++DEN ++ A ++PA Y VLLGITKASL+T+ Sbjct: 1281 RQMLRKVEIVDQGNSKFLNGEQVERQRVIDENAKLIARNELPAKYNPVLLGITKASLATE 1340 Query: 1320 SFISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARK 1372 SFISAASFQETTRVLTEAA+ G +D LRGLKENVIVGRLIPAGTG +H R+ Sbjct: 1341 SFISAASFQETTRVLTEAAVRGTRDNLRGLKENVIVGRLIPAGTGQRYHSQRR 1393