BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0299.p         (59 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3001 [J] COG1841 Ribosomal protein L30/L7E Rso Ralstonia sola...    99   2e-21
VC2578 [J] COG1841 Ribosomal protein L30/L7E Vch Vibrio cholerae       70   9e-13
NMB0160 [J] COG1841 Ribosomal protein L30/L7E Nme Neisseria meni...    70   1e-12
NMA0111 [J] COG1841 Ribosomal protein L30/L7E NmA Neisseria meni...    70   1e-12
HI0796 [J] COG1841 Ribosomal protein L30/L7E Hin Haemophilus inf...    69   2e-12

>RSc3001 [J] COG1841 Ribosomal protein L30/L7E Rso Ralstonia solanacearum
          Length = 60

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 53/54 (98%)

Query: 5  IKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVV 58
          +KVQLV+ LIGTR+DHRATVRGLGLRR+NSVSELQDTP+VRGMINKVSYLVKV+
Sbjct: 6  VKVQLVRSLIGTREDHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVI 59


>VC2578 [J] COG1841 Ribosomal protein L30/L7E Vch Vibrio cholerae
          Length = 58

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 40/54 (74%)

Query: 4  TIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKV 57
          TIKV   K  IG    H+AT+RGLGLR++N   EL+DTP VRGMINKV Y+VKV
Sbjct: 3  TIKVTQTKSSIGRLPKHKATLRGLGLRKINHTVELEDTPCVRGMINKVYYMVKV 56


>NMB0160 [J] COG1841 Ribosomal protein L30/L7E Nme Neisseria meningitidis
          MC58
          Length = 61

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 40/55 (72%)

Query: 5  IKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          I+V LVK LIGT + HRA  RGLGLRR     E+ DTP  RGMINK+SYL+KV S
Sbjct: 7  IRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTPENRGMINKISYLLKVES 61


>NMA0111 [J] COG1841 Ribosomal protein L30/L7E NmA Neisseria meningitidis
          Z2491
          Length = 61

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 40/55 (72%)

Query: 5  IKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          I+V LVK LIGT + HRA  RGLGLRR     E+ DTP  RGMINK+SYL+KV S
Sbjct: 7  IRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTPENRGMINKISYLLKVES 61


>HI0796 [J] COG1841 Ribosomal protein L30/L7E Hin Haemophilus influenzae
          Length = 59

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 42/57 (73%)

Query: 1  MANTIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKV 57
          MA TIKV  V+  I     H+AT+RGLGLR ++   EL DTP+VRGMIN+VSY+VKV
Sbjct: 1  MAKTIKVTQVRSSIARLPKHKATLRGLGLRHIHHTVELIDTPAVRGMINQVSYMVKV 57