BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0298.p         (143 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMB0161 [J] COG0200 Ribosomal protein L15 Nme Neisseria meningit...   203   7e-53
NMA0110 [J] COG0200 Ribosomal protein L15 NmA Neisseria meningit...   201   5e-52
RSc3000 [J] COG0200 Ribosomal protein L15 Rso Ralstonia solanace...   195   3e-50
YPO0228 [J] COG0200 Ribosomal protein L15 Ype Yersinia pestis         167   6e-42
PM1396 [J] COG0200 Ribosomal protein L15 Pmu Pasteurella multocida    164   7e-41

>NMB0161 [J] COG0200 Ribosomal protein L15 Nme Neisseria meningitidis MC58
          Length = 144

 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 103/142 (72%), Positives = 116/142 (81%)

Query: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M LNTIQPA GA H  RRVGRGIGSGLGKT GRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 1   MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLAAPYKAEVRLSDLESLPVTEIDILALKQAGVIGELAKVVRIILSGELTKKV 120
           LPKRGFKSL A   A++RLS+LES+ V EIDIL LKQAG+I      V++I SGE++K V
Sbjct: 61  LPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIASTVSNVKVIASGEISKAV 120

Query: 121 TVKGLIATKGAKAAIEAAGGSV 142
            +KG+  TKGA+AAIEA GG +
Sbjct: 121 ALKGIKVTKGARAAIEAVGGKI 142


>NMA0110 [J] COG0200 Ribosomal protein L15 NmA Neisseria meningitidis Z2491
          Length = 144

 Score =  201 bits (510), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 102/142 (71%), Positives = 115/142 (80%)

Query: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M LNTIQPA GA H  RRVGRGIGSGLGKT GRGHKGQKSRSGGFHKVGFEGGQMPLQRR
Sbjct: 1   MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60

Query: 61  LPKRGFKSLAAPYKAEVRLSDLESLPVTEIDILALKQAGVIGELAKVVRIILSGELTKKV 120
           LPKRGFKSL A   A++RLS+LES+ V EIDIL LKQAG+I      V++I  GE++K V
Sbjct: 61  LPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIASTVSNVKVIAFGEISKAV 120

Query: 121 TVKGLIATKGAKAAIEAAGGSV 142
            +KG+  TKGA+AAIEA GG +
Sbjct: 121 ALKGIKVTKGARAAIEAVGGKI 142


>RSc3000 [J] COG0200 Ribosomal protein L15 Rso Ralstonia solanacearum
          Length = 143

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/128 (75%), Positives = 108/128 (84%)

Query: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M+LN ++PA G+KH KRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPL RR
Sbjct: 1   MQLNNLKPAAGSKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLHRR 60

Query: 61  LPKRGFKSLAAPYKAEVRLSDLESLPVTEIDILALKQAGVIGELAKVVRIILSGELTKKV 120
           LPKRGF SL   + AEVRL DL  LPV EID+L LKQAG++GEL K  ++ILSG + KKV
Sbjct: 61  LPKRGFTSLTKEFTAEVRLGDLAGLPVAEIDLLTLKQAGLVGELVKSAKVILSGSIDKKV 120

Query: 121 TVKGLIAT 128
           T+KGL AT
Sbjct: 121 TLKGLGAT 128


>YPO0228 [J] COG0200 Ribosomal protein L15 Ype Yersinia pestis
          Length = 144

 Score =  167 bits (423), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 107/142 (75%)

Query: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M LNT+ PA+GAKH  +RVGRGIGSGLGKTAGRGHKGQ SRSGG  + GFEGGQMPL RR
Sbjct: 1   MRLNTLSPAEGAKHAPKRVGRGIGSGLGKTAGRGHKGQNSRSGGGVRRGFEGGQMPLYRR 60

Query: 61  LPKRGFKSLAAPYKAEVRLSDLESLPVTEIDILALKQAGVIGELAKVVRIILSGELTKKV 120
           LPK GF S  A   AEVRLS+L  +    ID+  LK A V+G   + V++ILSGE+ + V
Sbjct: 61  LPKFGFTSRKAMITAEVRLSELALVEGDVIDLNTLKAANVVGIQMEFVKVILSGEVNRAV 120

Query: 121 TVKGLIATKGAKAAIEAAGGSV 142
           T++GL  TKGA+AAIEAAGG +
Sbjct: 121 TLRGLRVTKGARAAIEAAGGKI 142


>PM1396 [J] COG0200 Ribosomal protein L15 Pmu Pasteurella multocida
          Length = 144

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 107/142 (75%)

Query: 1   MELNTIQPADGAKHYKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRR 60
           M LNT+ PA+GAKH  +R+GRGIGSGLGKT GRGHKGQKSR+GG  + GFEGGQMPL RR
Sbjct: 1   MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR 60

Query: 61  LPKRGFKSLAAPYKAEVRLSDLESLPVTEIDILALKQAGVIGELAKVVRIILSGELTKKV 120
           LPK GF S+ A   AEVRL+DL  +    + + +LK A VI +  + V+IIL+GE+   V
Sbjct: 61  LPKFGFTSMKAAVTAEVRLNDLAKVEGGVVTLESLKAANVITKDIQFVKIILAGEVKGAV 120

Query: 121 TVKGLIATKGAKAAIEAAGGSV 142
            V+GL  TKGAKAAIEAAGGSV
Sbjct: 121 VVRGLRVTKGAKAAIEAAGGSV 142