BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0267.p         (207 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2980 [S] COG2717 Predicted membrane protein Rso Ralstonia sol...   233   2e-61
CC2747 [S] COG2717 Predicted membrane protein Ccr Caulobacter vi...   150   2e-36
BMEII0304 [S] COG2717 Predicted membrane protein Bme Brucella me...   132   4e-31
DR2537 [S] COG2717 Predicted membrane protein Dra Deinococcus ra...   123   3e-28
SMc01282 [S] COG2717 Predicted membrane protein Sme Sinorhizobiu...   122   4e-28

>RSc2980 [S] COG2717 Predicted membrane protein Rso Ralstonia solanacearum
          Length = 217

 Score =  233 bits (594), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 115/199 (57%), Positives = 151/199 (75%)

Query: 7   LKPRQVGILKGVLFVLALLPFVRLIAFGFLDRLGANPIEFITRNTGDWTLYFLCITLAVT 66
           L P+ +  ++  +++LAL+PF+RL+  G  DR GANP+EF+TR+TG WTL  LC TLAVT
Sbjct: 6   LPPKSLRAVRIAVWLLALVPFLRLVVLGATDRYGANPLEFVTRSTGTWTLVLLCCTLAVT 65

Query: 67  PLRRLTGWNWLIRLRRMLGLFSFFYVVLHFMTFFWFDHFFDVEEMWRDVIKRPFITVGFI 126
           PLRRLTG NWLIR+RRMLGL++FFY  LHF+ +   D   D   M +D+ KRPFITVGF 
Sbjct: 66  PLRRLTGMNWLIRIRRMLGLYTFFYGTLHFLIWLLVDRGLDPASMVKDIAKRPFITVGFA 125

Query: 127 AFVLLIPLAATSTNAMVRRLGAKRWLWLHRLMYLILPLGILHFWWMKAGKNLLAQPILFA 186
           AFVL+IPLAATSTNAMVRRLG +RW WLHRL+Y+   LGILH+WW KAGK+  A+  ++A
Sbjct: 126 AFVLMIPLAATSTNAMVRRLGGRRWQWLHRLVYVTGVLGILHYWWHKAGKHDFAEVSIYA 185

Query: 187 TIVTSLLLLRMFFKFRSRK 205
            ++  LL LR+++ +R  +
Sbjct: 186 AVMAVLLGLRVWWVWRGAR 204


>CC2747 [S] COG2717 Predicted membrane protein Ccr Caulobacter vibrioides
          Length = 253

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 123/199 (61%), Gaps = 4/199 (2%)

Query: 11  QVGILKGVLFVLALLPFVRLIAFGFLDRLGANPIEFITRNTGDWTLYFLCITLAVTPLRR 70
           Q  ++ G++++    P   L   G+   LGANPI+ + R  G+W L  L + LA+TP  R
Sbjct: 57  QDTLVYGLVWLACFAPLAWLAWRGYAGELGANPIDKLIRELGEWGLRLLLVGLAITPAAR 116

Query: 71  LTGWNWLIRLRRMLGLFSFFYVVLHFMTFFWFDHFFDVEEMWRDVIKRPFITVGFIAFVL 130
           +     L+R RR +GLF+F YV LH + +   D FFD  ++W+D++KRPFIT+G + F+L
Sbjct: 117 ILKMPRLVRFRRTVGLFAFAYVALHLLAYVGIDLFFDWNQLWKDILKRPFITLGMLGFML 176

Query: 131 LIPLAATSTNAMVRRLGAKRWLWLHRLMYLILPLGILHFWWMKAGKNLLAQPILFATIVT 190
           LIPLA TSTN  V R+G   W  LHRL+YLI+PLG+ H++ +    +    PI++  +  
Sbjct: 177 LIPLAVTSTNGWVIRMGRAAWSRLHRLVYLIVPLGVAHYYLLVKADH--RPPIIYGAVFV 234

Query: 191 SLLLLRMFFKFR--SRKTP 207
           +L+L R++   R  S+ +P
Sbjct: 235 ALMLWRVWEGRRTASKSSP 253


>BMEII0304 [S] COG2717 Predicted membrane protein Bme Brucella melitensis
          Length = 220

 Score =  132 bits (333), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 5/189 (2%)

Query: 18  VLFVLALLPFVRLIAFGFLDRLGANPIEFITRNTGDWTLYFLCITLAVTPLRRLTGWNWL 77
           +L+    +P V     G   +LGA+P++      G W L FL +TL VTP+R LTG   L
Sbjct: 22  LLYTAGFVPAVWTFYLGATGQLGADPVKTFEHLLGLWALRFLILTLLVTPMRDLTGIT-L 80

Query: 78  IRLRRMLGLFSFFYVVLHFMTFFWFDHFFDVEEMWRDVIKRPFITVGFIAFVLLIPLAAT 137
           +R RR LGL +F+Y ++HF T+   D   ++  +  D+++RPFIT+G I+  LL+PLA T
Sbjct: 81  LRYRRALGLLAFYYALMHFTTYMVLDQGLNLSAIITDIVRRPFITIGMISLALLVPLALT 140

Query: 138 STNAMVRRLGAKRWLWLHRLMYLILPLGILHFWWMKAGKNLLAQPILFATIVTSLLLLRM 197
           S N  +R+LG +RW  LH+L+Y+ +    +HF  + + K+  A+P+++A IV +LLL R+
Sbjct: 141 SNNWSIRKLG-RRWSSLHKLVYIAIAGSAVHF--LMSVKSWPAEPVIYAAIVAALLLWRL 197

Query: 198 FFKF-RSRK 205
              + R+RK
Sbjct: 198 ARPYLRTRK 206


>DR2537 [S] COG2717 Predicted membrane protein Dra Deinococcus radiodurans
          Length = 202

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 23  ALLPFVRLIAFGFLDRLGANPIEFITRNTGDWTLYFLCITLAVTPLRRLTGWNWLIRLRR 82
            LLP V L+       LGANP++  T  TG   L  L ++LA TP R   GW W  R+R+
Sbjct: 19  GLLPTVFLLWDALSGGLGANPVKQATHQTGQLALIVLTLSLACTPARVWLGWTWAARIRK 78

Query: 83  MLGLFSFFYVVLHFMTFFWFDHFFDVEEMWRDVIKRPFITVGFIAFVLLIPLAATSTNAM 142
            LGL + FY VLHF  +      F +  +W DV +RPFIT GF A +LL+PL  TS    
Sbjct: 79  ALGLLAAFYAVLHFGIYL-RGQDFSLGRIWEDVTERPFITSGFAALLLLLPLVLTSGKGS 137

Query: 143 VRRLGAKRWLWLHRLMYLILPLGILHFWW 171
           VRRLG  RW  LHRL+YL   LG LH+WW
Sbjct: 138 VRRLGFARWTLLHRLVYLAAALGALHYWW 166


>SMc01282 [S] COG2717 Predicted membrane protein Sme Sinorhizobium meliloti
          Length = 216

 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 2/169 (1%)

Query: 1   MNALRNLKPRQVGILKGVLFVLALLPFVRLIAFGFLDRLGANPIEFITRNTGDWTLYFLC 60
           M +L  L  R  G     L++L  LP V     G   RL  N ++      G W L FL 
Sbjct: 1   MRSLPALPKRLHGPSIWALYILGFLPAVWGFYLGATGRLPGNAVKEFEHLLGIWALRFLI 60

Query: 61  ITLAVTPLRRLTGWNWLIRLRRMLGLFSFFYVVLHFMTFFWFDHFFDVEEMWRDVIKRPF 120
            TLA+TP+R L G NWL R RR LGL +F+YV++HF+T+   D    +  +  D+ +RPF
Sbjct: 61  ATLAITPIRDLFGVNWL-RYRRALGLLAFYYVMMHFLTYMVLDQTLLLPAIVADIARRPF 119

Query: 121 ITVGFIAFVLLIPLAATSTNAMVRRLGAKRWLWLHRLMYLILPLGILHF 169
           IT+G  A VLLIPLA TS    +RRLG +RW  LHRL+Y+I   G LHF
Sbjct: 120 ITIGMAALVLLIPLAVTSNIWSIRRLG-QRWNKLHRLVYVIAAAGALHF 167