BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0248.p         (193 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF1204 [S] COG3310 Uncharacterized protein conserved in bacteria...   201   9e-52
NMA0755 [S] COG3310 Uncharacterized protein conserved in bacteri...   178   6e-45
NMB0572 [S] COG3310 Uncharacterized protein conserved in bacteri...   177   9e-45
RSc3054 Non COG                                                       158   7e-39
VC1619 [S] COG3310 Uncharacterized protein conserved in bacteria...   148   9e-36

>XF1204 [S] COG3310 Uncharacterized protein conserved in bacteria Xfa
           Xylella fastidiosa 9a5c
          Length = 185

 Score =  201 bits (511), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 90/170 (52%), Positives = 125/170 (73%)

Query: 13  ISLTQAWVAEAVIGLNLCPFAKSVYVKQQIRYVVSHADNEADLAQQLLNELQHLQAADPE 72
           ++LT+ W+  AVIGLNLCPFAK+VY+KQQ+R V+S A     L + L  EL  L+    E
Sbjct: 9   LALTRQWIERAVIGLNLCPFAKAVYIKQQLRLVLSDATKPETLLEHLAKELLLLRDTPAE 68

Query: 73  LLDTTLLIHPHVLQDFYDYNNFLDVADQVLEDVELDGVIQIASFHPQYQFADALPDDIDN 132
            +DTTL++HPHVL DF DYN+FLD  D +++ ++L  ++Q+ASFHP+YQF    PDD+ N
Sbjct: 69  HIDTTLIVHPHVLTDFLDYNDFLDNVDAIIKTLDLQSILQVASFHPKYQFHGTAPDDMSN 128

Query: 133 YTNRSPFPILHLLRESSIDRAVAAYPEASAIFERNIATMRDLGLKGWNRL 182
           YTNRSP+P LHLLRE S+D A+AA+P+ + I +RNI T++ LG  GW ++
Sbjct: 129 YTNRSPYPSLHLLREKSVDHAIAAFPDPNVIVQRNIHTLKCLGHTGWQQV 178


>NMA0755 [S] COG3310 Uncharacterized protein conserved in bacteria NmA
           Neisseria meningitidis Z2491
          Length = 201

 Score =  178 bits (452), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 89/192 (46%), Positives = 118/192 (61%)

Query: 1   MDTATFPADDTVISLTQAWVAEAVIGLNLCPFAKSVYVKQQIRYVVSHADNEADLAQQLL 60
           M+  T    D V   T  W+ +AVIGLNLCPFAK+ +VK  +R  +S A +     + L 
Sbjct: 4   MNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNLVRIAISEAKHLDSFLEDLD 63

Query: 61  NELQHLQAADPELLDTTLLIHPHVLQDFYDYNNFLDVADQVLEDVELDGVIQIASFHPQY 120
            ELQ L       L+TTLL+HP +  DF  +N+ LD+AD  + +  L+G+IQIA FHP +
Sbjct: 64  EELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIADAAVVENGLEGIIQIAPFHPDF 123

Query: 121 QFADALPDDIDNYTNRSPFPILHLLRESSIDRAVAAYPEASAIFERNIATMRDLGLKGWN 180
           QF     DDI NYTNRSP+P LHL+RE SI +A  A+P+ASAIFERNIA +  +G +GW 
Sbjct: 124 QFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAFPDASAIFERNIALLEKMGHEGWA 183

Query: 181 RLAFVVSKKQHQ 192
           +L        H 
Sbjct: 184 KLGITSCPYPHN 195


>NMB0572 [S] COG3310 Uncharacterized protein conserved in bacteria Nme
           Neisseria meningitidis MC58
          Length = 201

 Score =  177 bits (450), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 88/192 (45%), Positives = 118/192 (61%)

Query: 1   MDTATFPADDTVISLTQAWVAEAVIGLNLCPFAKSVYVKQQIRYVVSHADNEADLAQQLL 60
           M+  T    D V   T  W+ +AVIGLNLCPFAK+ +VK  +R  +S A +     + L 
Sbjct: 4   MNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNLVRIAISEAKHLDGFLEDLD 63

Query: 61  NELQHLQAADPELLDTTLLIHPHVLQDFYDYNNFLDVADQVLEDVELDGVIQIASFHPQY 120
            ELQ L       L+TTLL+HP +  DF  +N+ LD+AD  + +  L+G++QIA FHP +
Sbjct: 64  EELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIADAAVVENGLEGIVQIAPFHPDF 123

Query: 121 QFADALPDDIDNYTNRSPFPILHLLRESSIDRAVAAYPEASAIFERNIATMRDLGLKGWN 180
           QF     DDI NYTNRSP+P LHL+RE SI +A  A+P+ASAIFERNIA +  +G +GW 
Sbjct: 124 QFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAFPDASAIFERNIALLEKMGHEGWA 183

Query: 181 RLAFVVSKKQHQ 192
           +L        H 
Sbjct: 184 KLGITSCPYPHN 195


>RSc3054 Non COG
          Length = 208

 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 88/172 (51%), Positives = 117/172 (68%), Gaps = 1/172 (0%)

Query: 12  VISLTQAWVAEAVIGLNLCPFAKSVYVKQQIRYVVSHADNEADLAQQLLNELQHLQAADP 71
           ++   + W+ +AVIGLNLCPFAK+V+VK+Q+RY VS A  + D+   L  E   L+A   
Sbjct: 28  LVGHVRRWLEDAVIGLNLCPFAKAVHVKRQVRYAVSRATMDGDVLDHLRAEADILRATPA 87

Query: 72  ELLDTTLLIHPHVLQDFYDYNNFLDVADQVLEDVELDGVIQIASFHPQYQFADALPDDID 131
             +DTTLLI P  L DF+D+++  + A+  L     +G +Q+ASFHP + FA+A PDDI 
Sbjct: 88  AEIDTTLLIVP-ALADFFDFHSLTERAEAQLARAGFEGELQLASFHPDFVFAEADPDDIA 146

Query: 132 NYTNRSPFPILHLLRESSIDRAVAAYPEASAIFERNIATMRDLGLKGWNRLA 183
           N TNR+P PILHLLRE SI RA AA P A+ I+ERNIATM  LG +GW  +A
Sbjct: 147 NATNRAPAPILHLLREDSIARAAAAVPNAADIYERNIATMERLGPEGWAAMA 198


>VC1619 [S] COG3310 Uncharacterized protein conserved in bacteria Vch
           Vibrio cholerae
          Length = 182

 Score =  148 bits (373), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 109/175 (62%)

Query: 8   ADDTVISLTQAWVAEAVIGLNLCPFAKSVYVKQQIRYVVSHADNEADLAQQLLNELQHLQ 67
           + +T+I     W+ + VIGLNLCPFA      QQI+  VS A +E  L Q + ++L  L 
Sbjct: 2   STETIIQEVDHWLNQVVIGLNLCPFAAKPQRNQQIKIYVSEARDEEALLQHIYDQLLELD 61

Query: 68  AADPELLDTTLLIHPHVLQDFYDYNNFLDVADQVLEDVELDGVIQIASFHPQYQFADALP 127
             +P+ L+TTL++ P++L DF DYN ++D  + ++   + +GV Q+A+FHP Y FA   P
Sbjct: 62  TKEPQELETTLVVVPNLLHDFVDYNFYIDWVEALIRQQDWEGVFQVATFHPDYCFAGTDP 121

Query: 128 DDIDNYTNRSPFPILHLLRESSIDRAVAAYPEASAIFERNIATMRDLGLKGWNRL 182
           +D +N TNRSP+PI HL+RE S+++ +  YP   AI E NIA +  L  +   +L
Sbjct: 122 EDDENLTNRSPYPIFHLIREESMEKVLKHYPNPEAIPETNIARVSSLSAQERKQL 176