BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0204.p         (234 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO1933 [R] COG3618 Predicted metal-dependent hydrolase of the T...   140   2e-33
AGl3341 [R] COG3618 Predicted metal-dependent hydrolase of the T...   119   4e-27
RSp0233 [R] COG3618 Predicted metal-dependent hydrolase of the T...    70   4e-12

>YPO1933 [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel
           fold Ype Yersinia pestis
          Length = 289

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 120/268 (44%), Gaps = 39/268 (14%)

Query: 6   IPDGACDCHIHIYDYTRFALMPAAPS-TPPQSLWSDYQREQQALGLTRAVIVQPTGYGFD 64
           +P+ ACD H H+        M A  S TPP +    Y     A G++R V+VQ + YG D
Sbjct: 22  LPEDACDSHAHVISPRAIYPMVAERSYTPPPAPEEKYLSMLAATGMSRGVLVQISVYGSD 81

Query: 65  NRCTLDALEQAQGSARAIVAVX-------------------------------------- 86
           NR  L  L++     R +  V                                       
Sbjct: 82  NRYMLQVLKRHPEYLRGVAVVTEDVTDQELQDMALAGVRGLRINVLFGGGIGFDAMENLA 141

Query: 87  AKIAPLGWNINLQIDGRDVEQYEDVLKSLPCRVVIDHNGKFLKPVTPDHPAMQSLLRLLD 146
           +KIAPLGW++   +D R +      +K LPC  VIDH G     +  +HP  Q+LL ++ 
Sbjct: 142 SKIAPLGWHMQFLMDVRQLPALIPRMKKLPCPCVIDHMGHMPVSLGLNHPGYQTLLHMVR 201

Query: 147 TGRCWIKLSAPYETSQTGAPHYEDVSALARTFAHKFPERCLWASNWPHPGRNPQPSNRAL 206
               W+KLS  Y  S++    Y DV   A+      P+R +W S+WPH   +  P    L
Sbjct: 202 EYGWWVKLSGAYRISESWQDGYLDVVPFAQKLIETAPDRMVWGSDWPHVSVSRMPDTGGL 261

Query: 207 FDLLPAWAPSAEVRTRILVDNPAALYGF 234
            +LL AW P  +VR RILVDNPA LY F
Sbjct: 262 RNLLAAWVPDEQVRNRILVDNPARLYDF 289


>AGl3341 [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel
           fold Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 292

 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 116/270 (42%), Gaps = 45/270 (16%)

Query: 6   IPDGACDCHIHIY--DYTRFALMPAAPSTPPQSLWSDYQREQQALGLTRAVIVQPTGYGF 63
            P GA D  +H+Y   Y      P  P         DY+R  Q LG+ R +I Q   +  
Sbjct: 17  FPRGAVDTQMHMYLPGYPALPGGPGLPPGALPGP-EDYRRLMQWLGIDRVIITQGNAHQR 75

Query: 64  DNRCTLDALEQAQGSARAIVAVXA--------KIAPLG---------------------- 93
           DN  TL  + +   +A A+V + A        K+   G                      
Sbjct: 76  DNGNTLACVAEMGEAAHAVVIIDATTTEKDMEKLTAAGTVGARIMDLPGGAVNLSELDAV 135

Query: 94  --------WNINLQIDGRDVEQYEDVLKSLPCRVVIDHNGKFLKPVTPDHPAMQSLLRLL 145
                   W + +Q DG  +  +   L+ +  R V DH+GKF K +  D P M +LL+L+
Sbjct: 136 DERAHAADWMVAVQFDGNGLLDHLPRLQKIRSRWVFDHHGKFFKGIRTDGPEMAALLKLI 195

Query: 146 DTGRCWIKLSAPYETSQTGAPHYEDVSALARTFAHKFPERCLWASNWPHPGRNPQ---PS 202
           D G  W K +  YE+S+   P Y DV+A +R  A   PER +W +NWPH         P 
Sbjct: 196 DRGNLWFKFAGVYESSRKSWP-YADVAAFSRVIAAHAPERIVWGTNWPHNSVRETAAYPD 254

Query: 203 NRALFDLLPAWAPSAEVRTRILVDNPAALY 232
           +  L +L   W P    R R LV+NP AL+
Sbjct: 255 DARLAELTLGWLPDEAARHRALVENPEALF 284


>RSp0233 [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel
           fold Rso Ralstonia solanacearum
          Length = 302

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 105/275 (38%), Gaps = 60/275 (21%)

Query: 10  ACDCHIHIYDYT-------RFALMPAAPSTPPQSLWSDYQREQQALGLTRAVIVQPTGYG 62
             D H H++          R+A  P+  +T P      Y  +  A GL+  V++QP+  G
Sbjct: 37  GIDTHAHVFKRGLPLAGARRYA--PSYDATLPA-----YLAQLDAHGLSHGVLIQPSFLG 89

Query: 63  FDNRCTLDALEQA--------------------QGSARAIVAVXA--------------- 87
            DN   L AL QA                    Q +A  IV +                 
Sbjct: 90  GDNSYLLAALRQAPQRLRGVAVIDPAAPEPFLAQLNAEGIVGIRLNLIGAPDPQLRAPAW 149

Query: 88  -----KIAPLGWNINLQIDGRDVEQYEDVLKSLPCRVVIDHNGKFLKPVTPDHPAMQSLL 142
                ++  LGW++ L      +      L      VV+DH G+    ++ + P   +LL
Sbjct: 150 QAALHRLHALGWHVELHTQAHRLPALLPPLLEAQVDVVVDHFGRPDPALSVEDPGFAALL 209

Query: 143 RLLDTGRCWIKLSAPYETSQTGAPHYEDVSALARTFAHKFPERCLWASNWPH---PGRNP 199
               T R W+K+S  Y     G      ++A+ R       +R +W S+WPH     R  
Sbjct: 210 AAGRTRRVWVKVSGAYRNGDAGRGEAIALAAMPRLKDALGTDRLVWGSDWPHTQYESRIG 269

Query: 200 QPSNRALFDLLPAWAPSAEVRTRILVDNPAALYGF 234
             S RA  D L    P A  R ++LV+ PA L+ F
Sbjct: 270 YDSARAFADTL---LPDAGDRHQVLVETPARLFRF 301