BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0090.p (369 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGpA653 [C] COG1902 NADH Atu Agrobacterium tumefaciens strain C5... 414 e-115 all1865 [C] COG1902 NADH Nos Nostoc sp. PCC 7120 385 e-107 MA1003 [C] COG1902 NADH Mac Methanosarcina acetivorans str.C2A 369 e-102 SMc01227 [C] COG1902 NADH Sme Sinorhizobium meliloti 365 e-101 AGc3979 [C] COG1902 NADH Atu Agrobacterium tumefaciens strain C5... 365 e-101 >AGpA653 [C] COG1902 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 364 Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/354 (59%), Positives = 249/354 (70%), Gaps = 3/354 (0%) Query: 10 LFSPLNMGALSLANRIVMAPLTRSRMGSDGVPNELHARYYAQRASAGLIISEATNISAQA 69 LF P +GA+SL+NRIVMAPLTR+R G+ VP +L A YY QRASAGLIISEAT IS Q Sbjct: 6 LFEPYALGAISLSNRIVMAPLTRNRAGAGFVPGDLTAEYYTQRASAGLIISEATQISQQG 65 Query: 70 RGYALTPGIWTEEQVAGWKLVTDAVHAAGGRIVCQLWHVGRFSHVDLQPGGAAPVAPSAI 129 +GY TPGI+T Q+ GW+ VT AVH GGRIV QLWHVGR SH+DLQP G PVAPSAI Sbjct: 66 QGYQDTPGIYTRAQIDGWRKVTAAVHEKGGRIVLQLWHVGRISHIDLQPNGGQPVAPSAI 125 Query: 130 RAEGQTYTENGMMDVSMPRALETSEIPGIIEQYRHAATCAKRAGFDGVEVHSANSYLLDQ 189 RA +T+ N +DVS PRALE E+ GI+ +R AA A AGFDGVE+H AN YLL+Q Sbjct: 126 RAATKTFVNNAFVDVSEPRALEIEELAGIVNDFRKAAANAIDAGFDGVEIHGANGYLLEQ 185 Query: 190 FLRDSTNKRSDQYGGSIENRSRLTLEVTAAVVDVWGHDRVGIRLSPVTPDAGNTPLDSQV 249 F +D N R+D YGGS+ENR+RL LEVTAAV G R GIR+SPV+P G + D+Q Sbjct: 186 FAKDGANVRTDAYGGSVENRARLMLEVTAAVAQEIGPARTGIRISPVSPANGISCSDAQA 245 Query: 250 MQTYGYLIEQLNRFQLAYMHFVEGATATSRVVPENVDLDALRELFKGPFIGNNNYDLELA 309 Y Y+++QL+ +AY+H VEGAT R V D +LR F +I NN YDLELA Sbjct: 246 Q--YDYIVDQLDALGVAYIHVVEGATGGPRDVAP-FDYGSLRRRFSKTYIANNGYDLELA 302 Query: 310 VNRRAEGKVDAVAFGRPFIANPDLVRRLQEGAELAIASRETYYGNGAKGYTDWP 363 AEGK D +AFGRPFIANPDLV+RLQ GA LA T YG GA+GYTD+P Sbjct: 303 ATHIAEGKADLIAFGRPFIANPDLVKRLQSGAPLAEIDPATIYGGGAEGYTDYP 356 >all1865 [C] COG1902 NADH Nos Nostoc sp. PCC 7120 Length = 402 Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/365 (54%), Positives = 240/365 (65%), Gaps = 2/365 (0%) Query: 2 KLNSSSTDLFSPLNMGALSLANRIVMAPLTRSRMGSDGVPNELHARYYAQRASAGLIISE 61 ++ S++ +LFS +G L L NRIVMAPLTR R G VP++L+A YY QRASAGLII+E Sbjct: 36 EIMSTNINLFSSYQLGELELPNRIVMAPLTRQRAGEGNVPHQLNAIYYGQRASAGLIIAE 95 Query: 62 ATNISAQARGYALTPGIWTEEQVAGWKLVTDAVHAAGGRIVCQLWHVGRFSHVDLQPGGA 121 AT ++ Q +GY TPGI + EQVAGWKLVTD VH GGRI QLWHVGR SH DLQP G Sbjct: 96 ATQVTPQGQGYPHTPGIHSPEQVAGWKLVTDTVHQQGGRIFLQLWHVGRISHPDLQPDGG 155 Query: 122 APVAPSAIRAEGQTYTENGMMDVSMPRALETSEIPGIIEQYRHAATCAKRAGFDGVEVHS 181 PVAPSAI +G+ T G PRAL+TSEIP I+EQYR A A AGFDGVE+H+ Sbjct: 156 LPVAPSAIAPKGEVLTYEGKKPYVTPRALDTSEIPAIVEQYRQGAANALAAGFDGVEIHA 215 Query: 182 ANSYLLDQFLRDSTNKRSDQYGGSIENRSRLTLEVTAAVVDVWGHDRVGIRLSPVTPDAG 241 AN YL+DQFLRD TN+R+D+YGG+IENR+RL LEVT A+ VW RVG+RLSP Sbjct: 216 ANGYLIDQFLRDGTNQRTDEYGGAIENRARLLLEVTEAITSVWDSQRVGVRLSP--SGTF 273 Query: 242 NTPLDSQVMQTYGYLIEQLNRFQLAYMHFVEGATATSRVVPENVDLDALRELFKGPFIGN 301 N DS ++T+GY+ + LNRF L+Y+H E A R V LR+ F G I N Sbjct: 274 NDIRDSHPLETFGYVAQALNRFNLSYLHIFEAIDADIRHGGTVVPTSHLRDRFTGTLIVN 333 Query: 302 NNYDLELAVNRRAEGKVDAVAFGRPFIANPDLVRRLQEGAELAIASRETYYGNGAKGYTD 361 Y E A D VAFG FI+NPDL RL+ A L A T+YG G KGYTD Sbjct: 334 GGYTREKGDTVIANKAADLVAFGTLFISNPDLPERLEVNAPLNQADPTTFYGGGEKGYTD 393 Query: 362 WPTLA 366 +P LA Sbjct: 394 YPFLA 398 >MA1003 [C] COG1902 NADH Mac Methanosarcina acetivorans str.C2A Length = 366 Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/366 (51%), Positives = 242/366 (66%), Gaps = 4/366 (1%) Query: 1 MKLNSSSTDLFSPLNMGALSLANRIVMAPLTRSRMGSDGVPNELHARYYAQRASAGLIIS 60 M + + TDLFS MG L+L NR+VMAP+TRSR G D +P L A YY QRASAG+II+ Sbjct: 1 MVIMAEDTDLFSQYRMGDLTLPNRMVMAPMTRSRAGDDDIPVPLTATYYVQRASAGMIIT 60 Query: 61 EATNISAQARGYALTPGIWTEEQVAGWKLVTDAVHAAGGRIVCQLWHVGRFSHVDLQPGG 120 E + +S Q G+ TPGI++ Q A WK +TDAVH AGGRI QLWHVGR SH DL GG Sbjct: 61 EGSQVSPQGVGFMHTPGIYSAAQAASWKKITDAVHKAGGRIFIQLWHVGRVSHSDLL-GG 119 Query: 121 AAPVAPSAIRAEGQTYTENGMMDVSMPRALETSEIPGIIEQYRHAATCAKRAGFDGVEVH 180 A PVAPSA+ EG +T G + +PRAL+T E+P I+ Q+R AA A+ AGFDGVE+H Sbjct: 120 ALPVAPSALPVEGYIHTPGGKKPIPVPRALKTDEVPDIVRQFRQAAENARAAGFDGVEIH 179 Query: 181 SANSYLLDQFLRDSTNKRSDQYGGSIENRSRLTLEVTAAVVDVWGHDRVGIRLSPVTPDA 240 AN+YLLDQFLR +NKR+D+YGGS+ENR+RL LEVT AV++VWG DRVG R+SP + Sbjct: 180 GANTYLLDQFLRSGSNKRTDKYGGSLENRARLPLEVTKAVIEVWGGDRVGYRISPH--NI 237 Query: 241 GNTPLDSQVMQTYGYLIEQLNRFQLAYMHFVEGATATSRVVPENVDLDA-LRELFKGPFI 299 ++ D+ +T+ Y ++LN+ L Y+H +E S VP L LR +F+ FI Sbjct: 238 AHSMSDANPGETFSYFAKELNKTGLGYLHLIEPIGGRSGFVPPEARLGPILRRIFERTFI 297 Query: 300 GNNNYDLELAVNRRAEGKVDAVAFGRPFIANPDLVRRLQEGAELAIASRETYYGNGAKGY 359 N Y L+ G+ D +AFG PF+ANPDL R ++ A L +T+Y G KGY Sbjct: 298 LNGGYGLQSGNEAIDSGEADLIAFGVPFLANPDLPERFRQNAPLNEPKLDTFYVGGEKGY 357 Query: 360 TDWPTL 365 TD+P L Sbjct: 358 TDYPAL 363 >SMc01227 [C] COG1902 NADH Sme Sinorhizobium meliloti Length = 373 Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/369 (51%), Positives = 244/369 (66%), Gaps = 16/369 (4%) Query: 10 LFSPLNMGALSLANRIVMAPLTRSRMGSDGVPNELHARYYAQRASAGLIISEATNISAQA 69 LF P+ +G +SL+NR+VMAPLTR+R VPN+L+ YY QRASAGL+I+E T IS Q Sbjct: 4 LFDPITIGDISLSNRVVMAPLTRNR-SPQAVPNDLNVAYYEQRASAGLLITEGTAISHQG 62 Query: 70 RGYALTPGIWTEEQVAGWKLVTDAVHAAGGRIVCQLWHVGRFSHVDLQPGGAAPVAPSAI 129 +GYA PG++ E +AGW+ VTD+VH AGG+IV Q+WHVGR SH LQP G PVAPSAI Sbjct: 63 QGYADVPGLYKPEALAGWRKVTDSVHKAGGKIVVQMWHVGRISHDSLQPQGGKPVAPSAI 122 Query: 130 RAEGQTYTEN-----GMMDVSMPRALETSEIPGIIEQYRHAATCAKRAGFDGVEVHSANS 184 RA+ +TY N + S PRALE +EI GI+E YR A+ A AGFDGVE+H+AN Sbjct: 123 RAKSKTYLVNPDGTGSFAETSEPRALEPAEIAGIVEDYRKASRAAIEAGFDGVEIHAANG 182 Query: 185 YLLDQFLRDSTNKRSDQYGGSIENRSRLTLEVTAAVVDVWGHDRVGIRLSPVTPDAGNTP 244 YL+DQFLR +N+R+D YGGSIENR+R EV AV G RVGIR+SPVTP N Sbjct: 183 YLIDQFLRSGSNERTDAYGGSIENRARFLFEVVDAVTKEIGAGRVGIRISPVTP--ANDA 240 Query: 245 LDSQVMQTYGYLIEQLNRFQLAYMHFVEGATATSRVVPEN---VDLDAL-----RELFKG 296 D + Y++E L R+ LAY+H +EGAT +R + D +L + Sbjct: 241 FDPDPQPLFTYVVEGLARYPLAYVHVIEGATGGARDHQQGDRPFDYTSLRAAYAAAGGRA 300 Query: 297 PFIGNNNYDLELAVNRRAEGKVDAVAFGRPFIANPDLVRRLQEGAELAIASRETYYGNGA 356 ++ NN YD LA+ G+ D VAFG+PFIANPDLVRRL++ L + T+YG GA Sbjct: 301 AWMTNNGYDRGLALKTVESGEADLVAFGKPFIANPDLVRRLRDNVALNAPDQATFYGGGA 360 Query: 357 KGYTDWPTL 365 KGYTD+P+L Sbjct: 361 KGYTDYPSL 369 >AGc3979 [C] COG1902 NADH Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 370 Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/371 (51%), Positives = 243/371 (65%), Gaps = 16/371 (4%) Query: 8 TDLFSPLNMGALSLANRIVMAPLTRSRMGSDGVPNELHARYYAQRASAGLIISEATNISA 67 T LF P G ++LANRIVMAPLTR+R +PN L+A YY QRA+AGLI++E T IS Sbjct: 2 TSLFEPAQAGDIALANRIVMAPLTRNRS-PGAIPNNLNATYYEQRATAGLIVTEGTPISQ 60 Query: 68 QARGYALTPGIWTEEQVAGWKLVTDAVHAAGGRIVCQLWHVGRFSHVDLQPGGAAPVAPS 127 Q +GYA PG++ +E + GWK +TD VH+AGG+IV Q+WHVGR SH LQP G PVAPS Sbjct: 61 QGQGYADVPGLYKQEAIEGWKKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPS 120 Query: 128 AIRAEGQTYTEN-----GMMDVSMPRALETSEIPGIIEQYRHAATCAKRAGFDGVEVHSA 182 AI A+ +TY N + S PRAL +I I+E YR A A AGFDGVE+H+A Sbjct: 121 AIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDYRSGARAALEAGFDGVEIHAA 180 Query: 183 NSYLLDQFLRDSTNKRSDQYGGSIENRSRLTLEVTAAVVDVWGHDRVGIRLSPVTPDAGN 242 N YL++QFL+ STN+R+D YGGSIENR+R LEV AV + G R GIRLSPVTP N Sbjct: 181 NGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTP--AN 238 Query: 243 TPLDSQVMQTYGYLIEQLNRFQLAYMHFVEGATATSRVVPEN---VDLDALRELF----- 294 ++ Y Y++E+L + LA++H VEGAT R + D + + Sbjct: 239 DIFEADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGG 298 Query: 295 KGPFIGNNNYDLELAVNRRAEGKVDAVAFGRPFIANPDLVRRLQEGAELAIASRETYYGN 354 KG +I NN YD E A+ GKVDAVAFG+ FIANPDLVRRL++ A L ++ T+YG Sbjct: 299 KGLWIANNGYDRESAIEAVESGKVDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGG 358 Query: 355 GAKGYTDWPTL 365 GA+GYTD+P L Sbjct: 359 GAEGYTDYPAL 369