BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0084.p (235 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 256 2e-68 SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 243 3e-64 ZlivF [E] COG0410 ABC-type branched-chain amino acid transport s... 241 1e-63 ECs4301 [E] COG0410 ABC-type branched-chain amino acid transport... 241 1e-63 livF [E] COG0410 ABC-type branched-chain amino acid transport sy... 241 1e-63 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 128/235 (54%), Positives = 174/235 (74%), Gaps = 3/235 (1%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V++L V YD +QAL G++L +NEGE+VSI+G+NGAGKTT + ++SGL+ SGSI F Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLG--STHPAARKVRKESMEEVY 119 E K++L A LGI QVPEGRR+F + V++NL LG + +A K ++E Y Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVKDSAEK-KEEDRANFY 121 Query: 120 TLLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIK 179 + PR+ ER+ Q+A TLSGGEQQM+A+GRAL S+PKLL+ DEPS+GLSPL V+E+F +IK Sbjct: 122 KVFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIK 181 Query: 180 SLNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G TIL+VEQN + L I DR+YV+E G IV+EG +DLL +D +KKA+LG Sbjct: 182 QLKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAEDLLYNDRVKKAYLG 236 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 116/233 (49%), Positives = 171/233 (73%) Query: 2 LLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSIDF 61 +L V+NLSVHY +QA+ V+ VNEGE+VS++G+NGAGKTT + ++SGL++ +SG I+F Sbjct: 3 MLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKIEF 62 Query: 62 EDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGSTHPAARKVRKESMEEVYTL 121 + + + A V G+ QVPEGR +FP +TV ENL +G+ R+ + ++++V++ Sbjct: 63 LGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSR 122 Query: 122 LPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKSL 181 PRL ER+ Q A TLSGGEQQM+A+GRAL S PKLL+ DEPS+GL+P+ +QE+F +I+ + Sbjct: 123 FPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQDI 182 Query: 182 NERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 ++G T+L++EQN K L I DR YVLE G IV+ GTGK+L + ++KA+LG Sbjct: 183 QKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLG 235 >ZlivF [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component EcZ Escherichia coli O157:H7 EDL933 Length = 241 Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 117/234 (50%), Positives = 166/234 (70%), Gaps = 1/234 (0%) Query: 1 MLLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSID 60 ++L+ +S HY +QAL V+LH+N+GEIV+++G+NGAGKTT + ++ G + TSG I Sbjct: 8 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIV 67 Query: 61 FEDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGSTHPAARKVRKESMEEVYT 120 F+DK + D + + VPEGRR+F MTVEENL +G A R +E ++ VY Sbjct: 68 FDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFF-AERDQFQERIKWVYE 126 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 L PRL ERR Q A T+SGGEQQM+AIGRAL S P+LL+ DEPSLGL+P+++Q++F I+ Sbjct: 127 LFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQ 186 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G+TI +VEQN + L++ DR YVLENGH+V+ TG LL ++ ++ A+LG Sbjct: 187 LREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLG 240 >ECs4301 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Ecs Escherichia coli O157:H7 Length = 241 Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 117/234 (50%), Positives = 166/234 (70%), Gaps = 1/234 (0%) Query: 1 MLLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSID 60 ++L+ +S HY +QAL V+LH+N+GEIV+++G+NGAGKTT + ++ G + TSG I Sbjct: 8 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIV 67 Query: 61 FEDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGSTHPAARKVRKESMEEVYT 120 F+DK + D + + VPEGRR+F MTVEENL +G A R +E ++ VY Sbjct: 68 FDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFF-AERDQFQERIKWVYE 126 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 L PRL ERR Q A T+SGGEQQM+AIGRAL S P+LL+ DEPSLGL+P+++Q++F I+ Sbjct: 127 LFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQ 186 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G+TI +VEQN + L++ DR YVLENGH+V+ TG LL ++ ++ A+LG Sbjct: 187 LREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLG 240 >livF [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Eco Escherichia coli K12 Length = 241 Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 117/234 (50%), Positives = 166/234 (70%), Gaps = 1/234 (0%) Query: 1 MLLNVQNLSVHYDGMQALAGVNLHVNEGEIVSILGSNGAGKTTFINSMSGLLKLTSGSID 60 ++L+ +S HY +QAL V+LH+N+GEIV+++G+NGAGKTT + ++ G + TSG I Sbjct: 8 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIV 67 Query: 61 FEDKSVLDVTAFARVPLGIVQVPEGRRLFPLMTVEENLLLGSTHPAARKVRKESMEEVYT 120 F+DK + D + + VPEGRR+F MTVEENL +G A R +E ++ VY Sbjct: 68 FDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFF-AERDQFQERIKWVYE 126 Query: 121 LLPRLRERRTQIAKTLSGGEQQMVAIGRALQSQPKLLMFDEPSLGLSPLLVQELFALIKS 180 L PRL ERR Q A T+SGGEQQM+AIGRAL S P+LL+ DEPSLGL+P+++Q++F I+ Sbjct: 127 LFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQ 186 Query: 181 LNERGITILMVEQNVRKTLQIVDRSYVLENGHIVMEGTGKDLLDDDLIKKAFLG 234 L E+G+TI +VEQN + L++ DR YVLENGH+V+ TG LL ++ ++ A+LG Sbjct: 187 LREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLG 240