BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0041.p (336 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 328 8e-90 DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 316 6e-86 TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 313 3e-85 BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 308 1e-83 CAC3182 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 304 2e-82 >BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 329 Score = 328 bits (842), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 175/328 (53%), Positives = 224/328 (68%), Gaps = 10/328 (3%) Query: 4 LLDVKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLL--PRK 61 LL V+ L+ TE+G + +V G+ F+VK GE + +VGESGCGKS+TSL++MGL+ P K Sbjct: 6 LLSVRELKTYFYTESGAVPSVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMGLVRSPGK 65 Query: 62 AVGTADRMTFDGVELLGLPEKKLNQLRGQRMSMIFQEPMTSLNPSYTLGNQLCEAMLEKP 121 VG R F+G +L + E++ +LRG +SMIFQEP+TSLNP +T+GNQL E +L+ Sbjct: 66 IVGGDIR--FNGQDLTTISEREYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGEVILQHQ 123 Query: 122 GVTRAEARDRAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADEP 181 VT+ EA+ + I +L + GI AE R YPHQLSGG+RQRVMIAMAL C P L+IADEP Sbjct: 124 QVTKEEAKQKGIEMLKKVGIPRAEQVYRSYPHQLSGGMRQRVMIAMALACEPKLLIADEP 183 Query: 182 TTALDVTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVETADVGQ 241 TTALDVTIQAQIL+++R+L +E TA++ ITHDLGVV+ +AD V VMYAGQVVE ADV Sbjct: 184 TTALDVTIQAQILQLMRKLVKENDTAILLITHDLGVVAEMADTVIVMYAGQVVEQADVFT 243 Query: 242 LFASPRHPYTRGLLDCIPVRGKTLPGSKLQAIPGVVPSLVGNIGGCVFRNRCSLADATC- 300 LFA+P HPYT+GLL P G KLQ+I G VP+ GC F RC A C Sbjct: 244 LFATPAHPYTQGLLASTP--NIHASGEKLQSIEGTVPTHETMPKGCRFFPRCLHATEQCV 301 Query: 301 EQDPPMLNTAGGDKTHHVRCHKVTAADA 328 Q+PP++ T G HVRC +A Sbjct: 302 HQEPPLMKTGRG---QHVRCWLFDGKEA 326 >DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Dra Deinococcus radiodurans Length = 386 Score = 316 bits (809), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 171/333 (51%), Positives = 222/333 (66%), Gaps = 19/333 (5%) Query: 3 VLLDVKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLLP--- 59 VLL V NL+ T++G++ +V G+ F +K+GE L +VGESG GKS+TSL +M L+P Sbjct: 32 VLLAVNNLKTYFNTDDGVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMRLIPMPP 91 Query: 60 -RKAVGTADRMTFDGVE--LLGLPEKKLNQLRGQRMSMIFQEPMTSLNPSYTLGNQLCEA 116 + A G DGV+ L+ + E ++ ++RG +SMIFQEPMTSLNP YT+G+Q+ EA Sbjct: 92 GQIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVGDQIAEA 151 Query: 117 MLEKPGVTRAEARDRAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLI 176 ++ G TR EA D A +L GI E R+ +YPHQ+SGG+RQRVMIAMAL C P L+ Sbjct: 152 VVLHQGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALSCKPALL 211 Query: 177 IADEPTTALDVTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVET 236 IADEPTTALDVTIQAQIL ++R LQRE G +++FITH+LGVV+ +ADRV VMY G+VVE Sbjct: 212 IADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYGGRVVEE 271 Query: 237 ADVGQLFASPRHPYTRGLLDCIP---------VRGKTLPGSKLQAIPGVVPSLVGNIGGC 287 DV ++F +PRHPYT GLL+ IP V G+ P +L+AIPG VP+ + GC Sbjct: 272 GDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQ--PKKRLEAIPGNVPNPLNLPPGC 329 Query: 288 VFRNRCSLADATCEQDPPMLNTAGGDKTHHVRC 320 F RC A C Q P L GG H RC Sbjct: 330 TFEPRCKFAVPQCSQAVPALEDTGGG--HMARC 360 >TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Tma Thermotoga maritima Length = 327 Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 155/315 (49%), Positives = 216/315 (68%), Gaps = 5/315 (1%) Query: 7 VKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLLPRKAVGTA 66 ++NL+ TE+G++ AV G+ F+V+ GE L +VGESG GKS+TSL++M LL + Sbjct: 1 MENLKTYFYTEDGVVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQNGKIVD 60 Query: 67 DRMTFDGVELLGLPEKKLNQLRGQRMSMIFQEPMTSLNPSYTLGNQLCEAMLEKPGVTRA 126 ++ F G LL L E ++ ++RG+ ++MIFQEPM +LNP +T+G+Q+ EA++ V+ Sbjct: 61 GKIIFKGRNLLELSENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQNVSEK 120 Query: 127 EARDRAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADEPTTALD 186 EAR AI LL + GI E R+ +YPHQLSGG+RQR MIAMAL C P L+IADEPTTALD Sbjct: 121 EARKMAIDLLRKVGIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADEPTTALD 180 Query: 187 VTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVETADVGQLFASP 246 VTIQAQIL +++ELQ+E+G A++ ITHD+GVV+ ++D+VAVMYAG+VVE DV +F P Sbjct: 181 VTIQAQILELMKELQKEYGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVKTIFTEP 240 Query: 247 RHPYTRGLLDCIPVRGKTLPGSKLQAIPGVVPSLVGNIGGCVFRNRCSLAD-ATCEQDPP 305 +HPYT LL+ IP + +L++IPG VP + GC F RC + C+ + P Sbjct: 241 KHPYTYALLESIP--RIDVEQERLKSIPGNVPDPLNFPPGCKFHPRCEFFEKGKCDVEEP 298 Query: 306 MLNTAGGDKTHHVRC 320 L G+ H VRC Sbjct: 299 ELEDLDGN--HKVRC 311 >BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bsu Bacillus subtilis Length = 358 Score = 308 bits (790), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/323 (48%), Positives = 216/323 (66%), Gaps = 14/323 (4%) Query: 4 LLDVKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLLPRKAV 63 LL+VK+L + T G + A+RG++F + +GE L +VGESG GKS+TS A+M L+P Sbjct: 7 LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPP- 65 Query: 64 GTADR--MTFDGVELLGLPEKKLNQLRGQRMSMIFQEPMTSLNPSYTLGNQLCEAMLEKP 121 G R + F+G +L+ L EK++ +RG+ + MIFQ+PMTSLNP+ +G Q+ E + + Sbjct: 66 GYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHE 125 Query: 122 GVTRAEARDRAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADEP 181 +++ A+ RA+ LL GI E R+ Q+PH+ SGG+RQRV+IAMAL P L+IADEP Sbjct: 126 KISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEP 185 Query: 182 TTALDVTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVETADVGQ 241 TTALDVTIQAQIL ++++LQ++ T+++FITHDLGVV+ +ADRVAVMYAGQ+VET V + Sbjct: 186 TTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDE 245 Query: 242 LFASPRHPYTRGLLDCIPVRGKTLPGS---KLQAIPGVVPSLVGNIGGCVFRNRCSLA-D 297 +F PRHPYT GLL +P TL S +L AIPG P L G F R S A Sbjct: 246 IFYDPRHPYTWGLLASMP----TLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMK 301 Query: 298 ATCEQDPPMLNTAGGDKTHHVRC 320 EQ+PPM + TH+V+ Sbjct: 302 IDFEQEPPMFKVSD---THYVKS 321 >CAC3182 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Cac Clostridium acetobutylicum Length = 324 Score = 304 bits (779), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 206/312 (66%), Gaps = 2/312 (0%) Query: 4 LLDVKNLRVDLPTENGMLHAVRGIDFQVKRGEMLCLVGESGCGKSMTSLALMGLLPRKAV 63 LL + NL+ +N + AV I F VK+GE +C+VGESGCGKS+TSL++MGL+ Sbjct: 5 LLKISNLKTYFYIDNDIRKAVDNISFSVKKGETVCIVGESGCGKSVTSLSIMGLINEPGR 64 Query: 64 GTADRMTFDGVELLGLPEKKLNQLRGQRMSMIFQEPMTSLNPSYTLGNQLCEAMLEKPGV 123 + + +LL L + L +LRG+ +SMIFQEPMTSLNP +T+G+Q+ E +LE + Sbjct: 65 IINGEILYKNNDLLKLSKSDLQKLRGKEISMIFQEPMTSLNPVFTIGHQITEILLEHELI 124 Query: 124 TRAEARDRAIYLLHRTGISNAEDRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADEPTT 183 + EA +AI L++ G+ AE+ ++ YPH+LSGG+ QR++IAMAL P L+IADEPTT Sbjct: 125 NKDEAYKKAIRLINSVGLPRAEEIMKSYPHKLSGGMLQRIIIAMALSSNPKLLIADEPTT 184 Query: 184 ALDVTIQAQILRMIRELQREFGTAVVFITHDLGVVSRIADRVAVMYAGQVVETADVGQLF 243 ALDVTIQAQIL ++++L+ T+++FITHDLGVV+ IAD V VMYAG+++E A V +LF Sbjct: 185 ALDVTIQAQILDLLKKLKSTLNTSILFITHDLGVVAEIADYVIVMYAGKIIEEAPVIELF 244 Query: 244 ASPRHPYTRGLLDCIPVRGKTLPGSKLQAIPGVVPSLVGNIGGCVFRNRCSLADATCEQD 303 +P+HPYT+GLL+ P+ GK KL +I G VP L C F +RC C + Sbjct: 245 KNPKHPYTQGLLNSKPIIGKH--RDKLYSIKGSVPDLSKLNESCYFHDRCEHCKDICTKK 302 Query: 304 PPMLNTAGGDKT 315 P KT Sbjct: 303 SPAFTVNNNHKT 314