BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0027.p (200 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr5281 Non COG 301 7e-82 SMa0349 [R] COG2085 Predicted dinucleotide-binding enzymes Sme S... 127 1e-29 AGpA255 [R] COG2085 Predicted dinucleotide-binding enzymes Atu A... 99 5e-21 Cgl2780 [R] COG2085 Predicted dinucleotide-binding enzymes Cgl C... 93 3e-19 XF1737 [R] COG2085 Predicted dinucleotide-binding enzymes Xfa Xy... 70 3e-12 >mlr5281 Non COG Length = 200 Score = 301 bits (770), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 162/197 (82%), Positives = 185/197 (93%) Query: 1 MSYAIIGFGNIGQALSKAFARNGIEVSVATTRDPESFASAAAAIGPTIIPRTLAEAVKAD 60 MSY+IIGFGNIGQAL+KAFAR GI+VSVATTRDPESFA+ AAAIGPTIIP+ LA+AVKAD Sbjct: 1 MSYSIIGFGNIGQALAKAFARKGIDVSVATTRDPESFAADAAAIGPTIIPKKLADAVKAD 60 Query: 61 IIFLAVRFESHPDVAKALSTWKGKTIIDVTNAYGVPPEELGGQPSSKVVAQAFTDARLVK 120 IIFLAVRFESHP+VAKAL+TW+GKTI+DVTNAYGVPPE+LGGQPSSK +AQAF+ A+LVK Sbjct: 61 IIFLAVRFESHPEVAKALATWQGKTIVDVTNAYGVPPEKLGGQPSSKFIAQAFSGAKLVK 120 Query: 121 GFNHLIAAVLAQDPAVHGGRRVVFLASDDEDAAAQVSTLAENLGFSPIRLGGISEGGLLV 180 GFNHL+AAVL Q PAVHGG+RVVFLASDD+ AAA++ LAE LGF+PI+LGG++EGGLLV Sbjct: 121 GFNHLVAAVLDQGPAVHGGKRVVFLASDDDAAAAEIGVLAEKLGFAPIKLGGLAEGGLLV 180 Query: 181 QARGNSWGQLIFKDLVK 197 ARGNSWGQLIFKDLVK Sbjct: 181 HARGNSWGQLIFKDLVK 197 >SMa0349 [R] COG2085 Predicted dinucleotide-binding enzymes Sme Sinorhizobium meliloti Length = 198 Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 3/183 (1%) Query: 2 SYAIIGFGNIGQALSKAFARNGIEVSVATTRDPESFASAAAAIGPTIIPRTLAEAVKADI 61 +YAIIG G IG AL++ F I +A +R P S +S G ++ L +A++AD+ Sbjct: 3 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADV 62 Query: 62 IFLAVRFESHPDVAKALSTWKGKTIIDVTNAYGVP---PEELGGQPSSKVVAQAFTDARL 118 + LAV ++S D+ +S W G+ ++D +NA P P +LGG+ S+++V++ A++ Sbjct: 63 VILAVPYDSIADIVTQVSDWGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKV 122 Query: 119 VKGFNHLIAAVLAQDPAVHGGRRVVFLASDDEDAAAQVSTLAENLGFSPIRLGGISEGGL 178 VK FN L AAVLA DP G RV+FL+ + DA QV+ L +LGF+P+ LG ++ G Sbjct: 123 VKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGP 182 Query: 179 LVQ 181 + Q Sbjct: 183 IQQ 185 >AGpA255 [R] COG2085 Predicted dinucleotide-binding enzymes Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 254 Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Query: 15 LSKAFARNGIEVSVATTRDPESFASAAAAIGPTIIPRTLAEAVKADIIFLAVRFESHPDV 74 + A + GIE +A +R PES + + +G TI ++ EA I+ +AV + P Sbjct: 71 FATALGKAGIEAVIANSRGPESLTALVSKLGSTIRAGSVPEAAAQAIVLVAVPWSKIPGA 130 Query: 75 AKALSTWKGKTIIDVTNAYGVP---PEELGGQPSSKVVAQAFTDARLVKGFNHLIAAVLA 131 L+ + + +ID N+ P P +LGG+ S+ + AR+VK FNHL L+ Sbjct: 131 LAGLN-FGDRIVIDANNSIEAPLYRPADLGGRTSTDIFTALVPGARVVKAFNHLTPKQLS 189 Query: 132 QDPAVHGGRRVVFLASDDEDAAAQVSTLAENLGFSPIRLGGISEGGLLVQARGNSWGQLI 191 DP GGRRV+F + DD A A+V + + +GF I LGG+ G L+Q G G L Sbjct: 190 GDPHSEGGRRVLFYSGDDMRAKAEVGAIIDRIGFFGIDLGGLPVGSQLLQFPG---GPLP 246 Query: 192 FKDLVK 197 +LVK Sbjct: 247 ALNLVK 252 >Cgl2780 [R] COG2085 Predicted dinucleotide-binding enzymes Cgl Corynebacterium glutamicum Length = 208 Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%) Query: 2 SYAIIGFGNIGQALSKAFARNGIEVSVATTRDPESFASAAAAIGPTIIPRTLAEAVK-AD 60 S AI+G G +G +L+++ G EV VA + + A A + P +P T +AVK AD Sbjct: 7 SIAILGAGRVGSSLARSAVAAGYEVKVAGSGAVDKIALTAEILMPGAVPSTADQAVKDAD 66 Query: 61 IIFLAVRFESHPDVAKALSTWKGKTIIDVTNAYGVPP----EELGGQP--SSKVVAQAFT 114 I+FLAV V A T +GK +ID N + VP EE+ P +S+++A+ F Sbjct: 67 IVFLAVPLHKFRSVNPA--TLEGKIVIDTMNHW-VPVNGELEEIDQDPRSTSEIIAEFFA 123 Query: 115 DARLVKGFNHLIAAVLAQDPAVHGGRRVVFLASDDEDAAAQVSTLAENLGFSPIRLGGIS 174 + +VK FNH+ + QD G R + A+DD DA AQV+ L ++ GF P+ +G + Sbjct: 124 GSTMVKSFNHIGYHEIEQDA---GTGRAIAYATDDVDAGAQVAQLIKSFGFVPLNIGAL- 179 Query: 175 EGGLLVQARGNSWGQLIFKD 194 E G +++ ++G + KD Sbjct: 180 ENGRILEPGQEAFGAHLNKD 199 >XF1737 [R] COG2085 Predicted dinucleotide-binding enzymes Xfa Xylella fastidiosa 9a5c Length = 242 Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 13/183 (7%) Query: 1 MSYAIIGFGNIGQALSKAFARNGIEVSVATTRDPESFASAAAAIGPTI-IPRTLAEAVKA 59 M +IG G++G + + + + G EV + ++R+P+ + A + P + + LA Sbjct: 33 MRIGVIGAGSLGGTVGRLWVKAGHEV-MFSSRNPDKLEAMARELEPRASVGQPLAATEFG 91 Query: 60 DIIFLAVRFESHPDVAKAL-STWKGKTIIDVTNAYGVPP-------EELGGQPSSKVVAQ 111 ++ LAV FE+ P V + L S ++GK ++D TN +G ELG ++ V + Sbjct: 92 TVLLLAVPFEALPQVGRDLRSAYRGKIVLDSTNPWGASSADVYREARELG---VAQTVVK 148 Query: 112 AFTDARLVKGFNHLIAAVLAQDPAVHGGRRVVFLASDDEDAAAQVSTLAENLGFSPIRLG 171 ARLV+ F+ + A V+ + GGR + LASDD +A L + G P+ +G Sbjct: 149 YMPGARLVRAFSAVDATVVETSASRRGGRIGMPLASDDAEAMKVAEGLVRDAGCDPVIVG 208 Query: 172 GIS 174 ++ Sbjct: 209 NLA 211