BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0010.p (503 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1022 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 417 e-116 CC1310 Non COG 273 9e-73 RSc2045 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solana... 268 2e-71 CC2131 Non COG 239 1e-62 CC1806 Non COG 234 5e-61 >PA1022 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 381 Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust. Identities = 216/386 (55%), Positives = 273/386 (70%), Gaps = 11/386 (2%) Query: 121 ADWDAMSEPQFRALVRGFFRQNYPDHLRHLSRRLHWNEIGEWYLTLSRQGWIAPAWPKEH 180 D+D++ + FR +VR + NYP +R+ RRL E EWYL LSRQGW+ P WP+E+ Sbjct: 2 TDYDSLDDNAFRLMVREWIAANYPQRIRNPPRRLGREETREWYLLLSRQGWLCPGWPREY 61 Query: 181 GGMGLSPDKHLAFIEEQEKYGVARMIDAGLTMTGPLLIRHGTPAQQQAYLPKIISGEHIW 240 GGMGLS K L +EE E+YG AR+ D+G+TM GPLLIR+G AQ+ +LP+I+SGE IW Sbjct: 62 GGMGLSAGKQLIMMEEMEEYGCARLPDSGVTMLGPLLIRYGDEAQRARFLPRILSGEDIW 121 Query: 241 SQGYSEPNAGSDLASLRTEAVLDQDGNNFIVNGQKTWTTMAQDSTHIFMLVRTSRSGKPQ 300 QGYSEPNAGSDLASLRTEA L+ +++NGQKTWTTM ++ IF+LVRT RS K Q Sbjct: 122 CQGYSEPNAGSDLASLRTEARLEN--GEWVINGQKTWTTMGSEANWIFLLVRTERSAKAQ 179 Query: 301 AGISFLLADIHSPGITVRPIRDLVGHEHFCEVFFDNVKVPKDNLVGEINQGWSLAKALLG 360 GISFLL + S GI VRPI +L H FCEVFF++V+VP D+LVGEINQGWS+AKALLG Sbjct: 180 HGISFLLVPMDSLGIEVRPILNLELHGEFCEVFFNDVRVPYDSLVGEINQGWSMAKALLG 239 Query: 361 FERIFLGNPRQSQNALAKLHALAAAQALFEDPLFNSKYARLLLDVADLSALYAKYADMVK 420 FERIFLG+P+QS AL +L LA L+ DPLF ++A L +D+ ALY ++A+ ++ Sbjct: 240 FERIFLGSPKQSTFALQRLERLARHLGLWHDPLFARRFAALSMDLDSHKALYERFAERLR 299 Query: 421 RGESLPPSVSILKIWATETYRRIGLLLYE-AGQEYGGNHPIEELGGDFDNLLTP---LIN 476 RGESL P VS+LKI+ +E ++RI L E AG++ P E D L P I Sbjct: 300 RGESLGPEVSMLKIFQSELFQRISELGLEIAGEDSALLQPFAE-----DPELHPAGIFIQ 354 Query: 477 SASATIYGGTNEIQRNILAKTVLGLP 502 S TIYGG+NEIQRNILAK+VLGLP Sbjct: 355 SRPTTIYGGSNEIQRNILAKSVLGLP 380 >CC1310 Non COG Length = 404 Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 161/396 (40%), Positives = 220/396 (55%), Gaps = 28/396 (7%) Query: 131 FRALVRGFFRQNYPDHLR---HLSRRLHWNEIGEWYLTLSRQGWIAPAWPKEHGGMGLSP 187 FR VR F +NYP LR + + W+ L+ +GW+APAWP ++GG G + Sbjct: 12 FRDEVRAFIAENYPAGLRDKQEEGEEMAKEDFLSWHRVLANKGWVAPAWPTQYGGPGWTS 71 Query: 188 DKHLAFIEEQEKYGVARMIDAGLTMTGPLLIRHGTPAQQQAYLPKIISGEHIWSQGYSEP 247 + + EE + ++ G+ M GP++ GTP Q++ +LP +SG+ WSQGYSEP Sbjct: 72 VQRYIWSEETARADCVPILPFGINMVGPVIYTFGTPEQKERFLPGTLSGDIWWSQGYSEP 131 Query: 248 NAGSDLASLRTEA--VLDQDGNNF-IVNGQKTWTTMAQDSTHIFMLVRTSRSGKPQAGIS 304 AGSDLASL+T+A DG + +VNGQKTWTTMAQ IF LVRT + K Q GIS Sbjct: 132 GAGSDLASLKTKAERFTGDDGKEYYLVNGQKTWTTMAQHGDWIFCLVRTDPNAKIQEGIS 191 Query: 305 FLLADIHSPGITVRPIRDLVGHEHFCEVFFDNVKVPKDNLVGEINQGWSLAKALLGFERI 364 FLL D+ SPG+TVRPI L G EV+F+NVKVP +N + + N+GW+ AK LL ER Sbjct: 192 FLLIDMKSPGVTVRPIITLGGEHEVNEVWFENVKVPVENRIYDENKGWTCAKFLLAHERS 251 Query: 365 FLGNPRQSQNALAKLHALAAAQ------ALFEDPLFNSKYARLLLDVADLSALYAKYADM 418 + +S+ + ++ +A+ + AL +DP+F K A L +D+ L + Sbjct: 252 GIAGVARSKRGIERIRQIASTELSDDGDALIKDPMFKRKVAELEIDLTALEYTELRTLAG 311 Query: 419 VKRGESLPPSVSILKIWATETYRRIGLLLYEAGQEYGG------------NHPIEELGGD 466 G P S+LKI TE +R+ L EA YG HPI G + Sbjct: 312 EAAGRGPGPESSVLKIKGTEIQQRLTELALEAAGHYGAPYFRGFPKDGDNAHPI---GPE 368 Query: 467 FDNLLTP-LINSASATIYGGTNEIQRNILAKTVLGL 501 F + P N +IYGG+NEIQRNI+AK VLGL Sbjct: 369 FAHRAAPTYFNVRKTSIYGGSNEIQRNIIAKMVLGL 404 >RSc2045 [I] COG1960 Acyl-CoA dehydrogenases Rso Ralstonia solanacearum Length = 398 Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 158/391 (40%), Positives = 227/391 (58%), Gaps = 24/391 (6%) Query: 131 FRALVRGFFRQNYPDHLRHL---SRRLHWNEIGEWYLTLSRQGWIAPAWPKEHGGMGLSP 187 FR VRG+ P ++ RRL+ ++ W+ L+ +GW P WP E GG G SP Sbjct: 12 FRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHWPVEWGGTGWSP 71 Query: 188 DKHLAFIEEQEKYGVARMIDAGLTMTGPLLIRHGTPAQQQAYLPKIISGEHIWSQGYSEP 247 + + EE + G ++ G++M P+++++G AQ++ YLP+I+ W QGYSEP Sbjct: 72 IQKHIWDEECARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDCTDWWCQGYSEP 131 Query: 248 NAGSDLASLRTEAVLDQDGNNFIVNGQKTWTTMAQDSTHIFMLVRTSRSGKPQAGISFLL 307 +GSDLASL+T AV ++G+++IVNGQKTWTT+ Q + IF LVRT K Q GISFLL Sbjct: 132 GSGSDLASLKTRAV--REGDHYIVNGQKTWTTLGQHADMIFCLVRTDPQAKMQEGISFLL 189 Query: 308 ADIHSPGITVRPIRDLVGHEHFCEVFFDNVKVPKDNLVGEINQGWSLAKALLGFERIFLG 367 D+ +PGITVRPI L EVFFDNV+VP +NL+GE N+GW+ AK LLG ER + Sbjct: 190 IDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYLLGHERTGIA 249 Query: 368 NPRQSQNALAKLHALA-----AAQALFEDPLFNSKYARLLLDVA--DLSALYAKYADMVK 420 S+ LA L +A + L EDP+F +K A L +++ +++ L ++ V Sbjct: 250 RVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVLRVVSSEGVG 309 Query: 421 RGESLPPSVSILKIWATETYRRIGLLLYEAGQEYGGNHPIEELGGDF------DNLLTPL 474 RG P S+LKI T+ + + L+ EA Y + L G+ DN PL Sbjct: 310 RGPG--PEASLLKIKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTGDNDAAPL 367 Query: 475 ----INSASATIYGGTNEIQRNILAKTVLGL 501 N +IYGG+NEIQRNI+++ +LG+ Sbjct: 368 APYYFNYRKTSIYGGSNEIQRNIISQMILGV 398 >CC2131 Non COG Length = 403 Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 216/397 (54%), Gaps = 31/397 (7%) Query: 131 FRALVRGFFRQNYPDHLRHL---SRRLHWNEIGE--WYLTLSRQGWIAPAWPKEHGGMGL 185 F+ VR + Y D LR S+ + ++ G+ W L+ +GW AP WP E GG G Sbjct: 12 FQQEVRDWIATAYDDDLRRQMSQSKNGYLDKAGQVKWQKKLAERGWAAPDWPVELGGAGF 71 Query: 186 SPDKHLAFIEEQEKYGVARMIDAGLTMTGPLLIRHGTPAQQQAYLPKIISGEHIWSQGYS 245 +P + F E GV GL M P+++ G+ AQ+ +LP I++ + W QGYS Sbjct: 72 TPSQRYIFNMEMSLAGVPTSSPMGLKMVAPVIMAFGSDAQKAQHLPPILNSDIWWCQGYS 131 Query: 246 EPNAGSDLASLRTEAVLDQDGNNFIVNGQKTWTTMAQDSTHIFMLVRTSRSGKPQAGISF 305 EP +GSDLASL+ AV +DG+++++NG K WTT AQ + +F LVRTS GKPQ GISF Sbjct: 132 EPGSGSDLASLQMRAV--RDGDDYVLNGSKIWTTHAQWADWMFCLVRTSTEGKPQEGISF 189 Query: 306 LLADIHSPGITVRPIRDLVG----HEHFCEVFFDNVKVPKDNLVGEINQGWSLAKALLGF 361 LL + +PGI ++P+ L G + +VFFDNV+VP N +GE N+GW+ AK LL F Sbjct: 190 LLLRMDTPGIQIKPLPTLDGPPDNEQEINQVFFDNVRVPVANRIGEENKGWTYAKYLLEF 249 Query: 362 ERIFLGNPRQS--QNALAKLHALAAAQ------ALFEDPLFNSKYARLLLDVADLSALYA 413 ER GN N L K+ +AA + L +DP F SK A L + V L+A Sbjct: 250 ER---GNAYAPGLMNMLKKVKRIAALERADDGGRLIDDPDFRSKIANLEIQVEALNASEL 306 Query: 414 KYADMVKRGESLPPSVSILKIWATETYRRIGLLLYEAGQEYGGN------HPIEE--LGG 465 + G+++ P+ S+LK +E + I L EA Y P + G Sbjct: 307 RIFSGRGAGKNIGPASSMLKCVGSEHQQAITELTLEAVGNYATPFVRDTWSPANDGRAGP 366 Query: 466 DFDNLLTP-LINSASATIYGGTNEIQRNILAKTVLGL 501 D+ P N A+IY G+NEIQRNI+AK VLGL Sbjct: 367 DYAGPAAPAYFNYRKASIYAGSNEIQRNIMAKMVLGL 403 >CC1806 Non COG Length = 355 Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 135/359 (37%), Positives = 189/359 (52%), Gaps = 15/359 (4%) Query: 153 RLHWNEIGEWYLTLSRQGWIAPAWPKEHGGMGLSPDKHLAFIEEQEKYGVARMIDAGLTM 212 RL +E +W L +GW AP+WPKE+GG G P K F E + GL + Sbjct: 2 RLEPHEFTQWQKLLYARGWGAPSWPKEYGGTGWDPTKLYIFETEASRADAPVQFHQGLEL 61 Query: 213 TGPLLIRHGTPAQQQAYLPKIISGEHIWSQGYSEPNAGSDLASLRTEAVLDQDGNNFIVN 272 GP++ G+P Q+ YLP I+SG+ W QGYSEPN+GSDLASL T AV +DGN +++N Sbjct: 62 IGPIIFTFGSPEQKAKYLPAIVSGDDWWCQGYSEPNSGSDLASLSTRAV--RDGNEYVIN 119 Query: 273 GQKTWTTMAQDSTHIFMLVRTSRSGKPQAGISFLLADIHSPGITVRPIRDLVGHEHFCEV 332 GQK WT+ A + +F+L RT + QAGIS L DI +PG+T+RP+ + H EV Sbjct: 120 GQKAWTSYAHVANRMFLLARTDPDARKQAGISLFLIDIDTPGVTIRPVVTMDEIHHTNEV 179 Query: 333 FFDNVKVPKDNLVGEINQGWSLAKALLGFERIFLGNPRQSQNALAK---------LHALA 383 F DNV+VP L+GE GWS K LL ER G + LA+ + Sbjct: 180 FLDNVRVPPSALLGEEGMGWSYGKVLLDRER---GVTAATTTRLAQQLRGARKVAAETMV 236 Query: 384 AAQALFEDPLFNSKYARLLLDVADLSALYAKYADMVKRGESLPPSVSILKIWATETYRRI 443 ++L +DP + A+ L+V L + + G+ P S++KI +E ++I Sbjct: 237 GGRSLLDDPRVADRLAQFELEVMALEGMVMRTMAEATSGQDSGPRASMIKIRWSELLQQI 296 Query: 444 GLLLYE-AGQEYGGNHPIEELGGDFDNLLTPLINSASATIYGGTNEIQRNILAKTVLGL 501 E G + P+ +I S +IYGG+NEIQRNI+A+ LGL Sbjct: 297 TEYWVELQGYDAMAFAPLGPFEAPDAWAAKGMIYSRVTSIYGGSNEIQRNIIARRALGL 355