BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0006.p         (92 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1023 [IQR] COG1028 Dehydrogenases with different specificities...    77   8e-15
YKR009c_1 [IQR] COG1028 Dehydrogenases with different specificit...    75   3e-14
PA3427 [IQR] COG1028 Dehydrogenases with different specificities...    72   3e-13
Rv3548c [IQR] COG1028 Dehydrogenases with different specificitie...    66   2e-11
MT3652 [IQR] COG1028 Dehydrogenases with different specificities...    66   2e-11

>PA1023 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Pae
          Pseudomonas aeruginosa
          Length = 305

 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 50/70 (71%)

Query: 3  EGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAGGG 62
          EGKV  VTGAGGGIGR+IALA+A  GA +VINDIG SL GEG  A PA+  +  I+  GG
Sbjct: 7  EGKVAIVTGAGGGIGREIALALADSGARVVINDIGVSLQGEGGSASPAEETLGLIRQRGG 66

Query: 63 NAVANTSSVA 72
            + NT SVA
Sbjct: 67 EGLINTDSVA 76


>YKR009c_1 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Sce
          Saccharomyces cerevisiae
          Length = 622

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 56/84 (66%)

Query: 5  KVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAGGGNA 64
          +V+ +TGAGGG+G+  ALA A +GA +V+ND+G +L G G+++  A  VVDEIK  GG A
Sbjct: 10 RVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIA 69

Query: 65 VANTSSVASAGPRLLGRRRRPDGR 88
          VAN  SV   G +++    +  GR
Sbjct: 70 VANYDSVNENGEKIIETAIKEFGR 93


>PA3427 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Pae
          Pseudomonas aeruginosa
          Length = 303

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 49/74 (66%)

Query: 2  LEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGPAQRVVDEIKAGG 61
           + +V+ VTGAGGG+GR  AL  A+ GA +V+ND+G S  GEG  A  A +VV EI+A G
Sbjct: 7  FDDQVVIVTGAGGGLGRAHALLFAKHGARVVVNDLGGSTHGEGASASAADKVVAEIRAAG 66

Query: 62 GNAVANTSSVASAG 75
          G AVAN  SV   G
Sbjct: 67 GTAVANHDSVTDGG 80


>Rv3548c [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Mtu
          Mycobacterium tuberculosis H37Rv
          Length = 304

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 1  MLEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGP-AQRVVDEIKA 59
          +++G+V+ VTGAGGGIGR  ALA A +GA +V+NDIG  L G     G  AQ VVDEI A
Sbjct: 3  LVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILA 62

Query: 60 GGGNAVANTSSVA 72
           GG AVA+ S ++
Sbjct: 63 AGGQAVADGSDIS 75


>MT3652 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) MtC
          Mycobacterium tuberculosis CDC1551
          Length = 316

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 1  MLEGKVIAVTGAGGGIGRDIALAMAQQGALLVINDIGASLSGEGNDAGP-AQRVVDEIKA 59
          +++G+V+ VTGAGGGIGR  ALA A +GA +V+NDIG  L G     G  AQ VVDEI A
Sbjct: 15 LVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILA 74

Query: 60 GGGNAVANTSSVA 72
           GG AVA+ S ++
Sbjct: 75 AGGQAVADGSDIS 87