BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0003.p         (274 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0878 [S] COG3777 Uncharacterized conserved protein Pae Pseudom...   183   4e-46
BMEII1075 [S] COG3777 Uncharacterized conserved protein Bme Bruc...   159   8e-39
CC1109 Non COG                                                        152   6e-37
SPBC1105.15c [S] COG3777 Uncharacterized conserved protein Spo S...    84   3e-16

>PA0878 [S] COG3777 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 275

 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/262 (42%), Positives = 140/262 (53%), Gaps = 29/262 (11%)

Query: 7   IDTSFKEQDP-----LPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPRR 61
           I  +F E  P     LPP WHW FF      + LG DGHP RG       FLPP     R
Sbjct: 28  IAATFGEPTPAHGEALPPLWHWAFFQDPVEAAGLGVDGHPARGG------FLPPADDRNR 81

Query: 62  MFAGSRLDWRGDLKVGARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQD 121
           M+AG RL++   L+VG    + STIL VE K G SG ++FVT+RH YR+D    L E+ D
Sbjct: 82  MWAGGRLEFHQPLRVGGEASRTSTILRVEEKHGRSGALLFVTLRHDYRQDGQLALSEEHD 141

Query: 122 IVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNGH 181
           IVYR+ +                +L G E   +   +  + ++PDPV LFRYSA TFNGH
Sbjct: 142 IVYREPTPP--------------KLGGTEA--LPEGDWREALEPDPVLLFRYSAVTFNGH 185

Query: 182 RIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGPF 241
           RIHYD PY T  E YPGLVVHGPL+AT+ +    R   P   L+ F +R  RP     PF
Sbjct: 186 RIHYDWPYVTDAEGYPGLVVHGPLIATLALRAFCR-ANPQARLRRFAYRGLRPLICPEPF 244

Query: 242 HLHAGAGDENGRIELWSTNNVG 263
            +  G     G+ E+W  N  G
Sbjct: 245 EV-GGRLLAAGKAEVWVGNGAG 265


>BMEII1075 [S] COG3777 Uncharacterized conserved protein Bme Brucella
           melitensis
          Length = 276

 Score =  159 bits (401), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 136/244 (55%), Gaps = 32/244 (13%)

Query: 33  SILGEDGHPPRGAXGPRGDFLPPVSLPRRMFAGSRLDWRGDLKVGARIEKESTILSVESK 92
           S LG DGHP RG       FLPPV LPRRM+AG    +R D++VG  + + S I  V  K
Sbjct: 60  SRLGPDGHPARGG------FLPPVPLPRRMWAGGAFTFRDDIRVGDIVTRTSRIQDVVVK 113

Query: 93  SGSSGDMVFVTVRHLYREDSLQLLEEQQDIVYR--DVSSTGEREALALLAERVRQLKGEE 150
            G +G + FVTV H +  +    + E+QDIVYR  D+S+   +   A+         G  
Sbjct: 114 EGRTGTLCFVTVGHEFHSNGRHAVTERQDIVYRGADMSNPAAKTQPAVP-------HGPH 166

Query: 151 FSFVKPAERTQRVQPDPVHLFRYSAATFNGHRIHYDHPYATGVEHYPGLVVHGPLLATML 210
             F+ P+         P+ LFRYSA TFNGHRIHYD PY   VE+YPGL+VHGP+ ATML
Sbjct: 167 CRFITPSA--------PL-LFRYSALTFNGHRIHYDAPYVRNVENYPGLIVHGPMQATML 217

Query: 211 VEFL--LREVAPGRALQHFEFRAKRPTFDIGPFHLHAGAGDENGRIELWSTNNVGEVAVH 268
           V F   +R   P R    F+FR+  P FD   F L+  A D+   ++LW++   G VA+ 
Sbjct: 218 VRFATEIRGKPPVR----FDFRSLSPLFDDADFTLN--AIDDGEGLKLWTSYANGPVAME 271

Query: 269 GWAV 272
             A+
Sbjct: 272 ARAL 275


>CC1109 Non COG
          Length = 265

 Score =  152 bits (385), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 130/245 (53%), Gaps = 28/245 (11%)

Query: 17  LPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPRRMFAGSRLDWRGDLKV 76
           +PP WHW    +   ++ +G DGHP RG       FLPP++  RRMFA + + + G L  
Sbjct: 38  VPPAWHWACLAEPVARADIGPDGHPRRGL------FLPPIAATRRMFASADMSFSGALVA 91

Query: 77  GARIEKESTILSVESKSGSSGDMVFVTVRHLYREDSLQLLEEQQDIVYRDVSSTGEREAL 136
           G   +   TI ++E K G+SG + FVTV  +  + +   + E+Q IVY   SS       
Sbjct: 92  GQETDLVETIANIEEKPGASGPLTFVTVDRVISQANELRVRERQTIVYTSASS------- 144

Query: 137 ALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSAATFNGHRIHYDHPYATGVEHY 196
              A RV      +     PA  +Q    DPV LF +SAAT N HRIHYD  YAT VE Y
Sbjct: 145 ---APRV-----ADSGPPPPAAWSQDTATDPVLLFAFSAATSNSHRIHYDLGYATQVEGY 196

Query: 197 PGLVVHGPLLATMLVEFLLREVAPGRALQHFEFRAKRPTFDIGPFHLHAGAGDENGRIEL 256
           PGLVVHGPL+A +L++ +     P RA+  F FRA +P F  G      G   E+G  EL
Sbjct: 197 PGLVVHGPLIALLLLDAM-----PPRAVSRFSFRALKPAF-AGETLTAEGRLIEDG-AEL 249

Query: 257 WSTNN 261
           W+ + 
Sbjct: 250 WAISG 254


>SPBC1105.15c [S] COG3777 Uncharacterized conserved protein Spo
           Schizosaccharomyces pombe
          Length = 300

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 108/250 (43%), Gaps = 43/250 (17%)

Query: 17  LPPCWHWLFFNQIDPQSILGEDGHPPRGAXGPRGDFLPPVSLPRRMFAGSRLDWRGDLKV 76
           L P +H+LFF+   P+S L  DG+    +  P      P S  RR++    L +   L +
Sbjct: 41  LQPGYHFLFFSLASPESNLNSDGYESLYSPKPNN----PFSFKRRIWLHGVLRFHRPLHL 96

Query: 77  GARIEKESTILSVESKSGSSGDMV--------FVTV-------------RHLYREDSLQL 115
               E    I     KS S    V        F+T              R +Y       
Sbjct: 97  FQTSECHELIQEESVKSPSITKEVEACLPKSSFLTKPTSEKQTKHVYIRRKIYDSQHQLC 156

Query: 116 LEEQQDIVYRDVSSTGEREALALLAERVRQLKGEEFSFVKPAERTQRVQPDPVHLFRYSA 175
           +EE + + Y +      R+ LA+  + +R     + S+V          P P+ +FRYSA
Sbjct: 157 IEEDRTLAYLN------RQELAI-PKTLRSKSIPQHSWV--------FTPTPIMVFRYSA 201

Query: 176 ATFNGHRIHYDHPYATGVEHYPGLVVHGPLLATMLVEFLLREVAP--GRALQHFEFRAKR 233
             FN H IH++  YAT  E+YP LV+ GPLL T ++E+  R V P   + ++ FEFR   
Sbjct: 202 LMFNAHMIHWNATYATKSENYPNLVLPGPLLVTSMLEY-FRSVYPQMSKNMKRFEFRLLS 260

Query: 234 PTFDIGPFHL 243
           P F   P  +
Sbjct: 261 PAFVNQPLRI 270