BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0002.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0492 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melit...    76   2e-14
STM0857 [I] COG1960 Acyl-CoA dehydrogenases Sty Salmonella typhi...    72   2e-13
CC1110 Non COG                                                         66   2e-11

>BMEII0492 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melitensis
          Length = 395

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 38/45 (84%)

Query: 13  GQMYNMGTLLRHGSAEQKAKYLPDIASGKLRLQSMAVTEPTTGTD 57
            QMY MGTLLRHGS EQKA YLP IASG+LRLQ+  VTEPT+GTD
Sbjct: 96  AQMYTMGTLLRHGSDEQKACYLPKIASGELRLQAFGVTEPTSGTD 140


>STM0857 [I] COG1960 Acyl-CoA dehydrogenases Sty Salmonella typhimurium LT2
          Length = 387

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/45 (73%), Positives = 37/45 (82%)

Query: 13  GQMYNMGTLLRHGSAEQKAKYLPDIASGKLRLQSMAVTEPTTGTD 57
           GQMYNM TLLRHGS +QK  +LP IA+G+ RLQSM VTEPT GTD
Sbjct: 88  GQMYNMNTLLRHGSDKQKEFWLPRIATGEWRLQSMGVTEPTAGTD 132


>CC1110 Non COG
          Length = 387

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 34/48 (70%)

Query: 13  GQMYNMGTLLRHGSAEQKAKYLPDIASGKLRLQSMAVTEPTTGTDYES 60
            QMY MGT+LRHGS  QK  +LP IA G +RLQ+  VTEPT GTD  S
Sbjct: 88  AQMYTMGTVLRHGSTAQKETWLPRIADGSIRLQAFGVTEPTAGTDTTS 135